RNA–Protein interactions for RNA: ENST00000572360.5

TOM1L1-212, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1L1, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-212ENST00000572360 RBM46Q8TBY0 533 aaKnown RBP8.56□□□□□ -1.04
TOM1L1-212ENST00000572360 PXYLP1Q8TE99 480 aa8.55□□□□□ -1.04
TOM1L1-212ENST00000572360 ZPR1O75312 459 aa8.54□□□□□ -1.04
TOM1L1-212ENST00000572360 BLOC1S3Q6QNY0 202 aa8.54□□□□□ -1.04
TOM1L1-212ENST00000572360 EMID1Q96A84 441 aaPredicted RBP8.54□□□□□ -1.04
TOM1L1-212ENST00000572360 PRKD2Q9BZL6 878 aa8.53□□□□□ -1.04
TOM1L1-212ENST00000572360 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.53□□□□□ -1.04
TOM1L1-212ENST00000572360 METTL3Q86U44 580 aaKnown RBP8.52□□□□□ -1.05
TOM1L1-212ENST00000572360 ACTN4O43707 911 aaKnown RBP8.51□□□□□ -1.05
TOM1L1-212ENST00000572360 HIC1Q14526 733 aa8.51□□□□□ -1.05
TOM1L1-212ENST00000572360 NECTIN2Q92692 538 aa8.51□□□□□ -1.05
TOM1L1-212ENST00000572360 PCDHB3Q9Y5E6 796 aa8.51□□□□□ -1.05
TOM1L1-212ENST00000572360 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.5□□□□□ -1.05
TOM1L1-212ENST00000572360 TLL1O43897 1013 aa8.5□□□□□ -1.05
TOM1L1-212ENST00000572360 PHOX2BQ99453 314 aa8.5□□□□□ -1.05
TOM1L1-212ENST00000572360 CFHP08603 1231 aa8.49□□□□□ -1.05
TOM1L1-212ENST00000572360 OATP04181 439 aa8.48□□□□□ -1.05
TOM1L1-212ENST00000572360 NLRP7Q8WX94 980 aa8.48□□□□□ -1.05
TOM1L1-212ENST00000572360 V9GY48 417 aaPredicted RBP8.48□□□□□ -1.05
TOM1L1-212ENST00000572360 GNPATO15228 680 aa8.47□□□□□ -1.05
TOM1L1-212ENST00000572360 HAP1P54257 671 aaPredicted RBP8.47□□□□□ -1.05
TOM1L1-212ENST00000572360 RNF223E7ERA6 249 aa8.46□□□□□ -1.06
TOM1L1-212ENST00000572360 GFRA3O60609 400 aa8.46□□□□□ -1.06
TOM1L1-212ENST00000572360 PRR14Q9BWN1 585 aa8.46□□□□□ -1.06
TOM1L1-212ENST00000572360 SLC4A3P48751 1232 aa8.45□□□□□ -1.06
TOM1L1-212ENST00000572360 Q6ZNB5 142 aa8.45□□□□□ -1.06
TOM1L1-212ENST00000572360 TMUB1Q9BVT8 246 aa8.45□□□□□ -1.06
TOM1L1-212ENST00000572360 TRIM67Q6ZTA4 783 aa8.44□□□□□ -1.06
TOM1L1-212ENST00000572360 PPEF1O14829 653 aaPredicted RBP8.43□□□□□ -1.06
TOM1L1-212ENST00000572360 SMYD5Q6GMV2 418 aa8.43□□□□□ -1.06
TOM1L1-212ENST00000572360 LAPTM4AQ15012 233 aa8.42□□□□□ -1.06
TOM1L1-212ENST00000572360 KMT5BQ4FZB7 885 aa8.42□□□□□ -1.06
TOM1L1-212ENST00000572360 NRG2O14511 850 aaPredicted RBP8.41□□□□□ -1.06
TOM1L1-212ENST00000572360 S1PR4O95977 384 aa8.41□□□□□ -1.06
TOM1L1-212ENST00000572360 PUS10Q3MIT2 529 aaKnown RBP8.41□□□□□ -1.06
TOM1L1-212ENST00000572360 SCUBE3Q8IX30 993 aa8.41□□□□□ -1.06
TOM1L1-212ENST00000572360 DAXXQ9UER7 740 aaPredicted RBP8.41□□□□□ -1.06
TOM1L1-212ENST00000572360 PLA2G2CQ5R387 149 aa8.4□□□□□ -1.06
TOM1L1-212ENST00000572360 LIAT1Q6ZQX7 453 aa8.4□□□□□ -1.06
TOM1L1-212ENST00000572360 ADH1BP00325 375 aa8.39□□□□□ -1.07
TOM1L1-212ENST00000572360 GGCXP38435 758 aa8.39□□□□□ -1.07
TOM1L1-212ENST00000572360 GPIHBP1Q8IV16 184 aa8.38□□□□□ -1.07
TOM1L1-212ENST00000572360 ANKLE1Q8NAG6 615 aa8.38□□□□□ -1.07
TOM1L1-212ENST00000572360 THAP11Q96EK4 314 aa8.38□□□□□ -1.07
TOM1L1-212ENST00000572360 SLC19A1P41440 591 aa8.37□□□□□ -1.07
TOM1L1-212ENST00000572360 MORN1Q5T089 497 aa8.37□□□□□ -1.07
TOM1L1-212ENST00000572360 TRAF7Q6Q0C0 670 aa8.37□□□□□ -1.07
TOM1L1-212ENST00000572360 PDZRN3Q9UPQ7 1066 aa8.37□□□□□ -1.07
TOM1L1-212ENST00000572360 NR1I2O75469 434 aa8.36□□□□□ -1.07
TOM1L1-212ENST00000572360 GCGRP47871 477 aa8.36□□□□□ -1.07
TOM1L1-212ENST00000572360 FUT2Q10981 343 aa8.36□□□□□ -1.07
TOM1L1-212ENST00000572360 SPRYD7Q5W111 196 aa8.36□□□□□ -1.07
TOM1L1-212ENST00000572360 DDX11L8A8MPP1 907 aa8.35□□□□□ -1.07
TOM1L1-212ENST00000572360 VSIG10Q8N0Z9 540 aa8.34□□□□□ -1.07
TOM1L1-212ENST00000572360 FAM160A2Q8N612 972 aaPredicted RBP8.34□□□□□ -1.07
TOM1L1-212ENST00000572360 ZNF598Q86UK7 904 aaKnown RBP8.33□□□□□ -1.08
TOM1L1-212ENST00000572360 RDH13Q8NBN7 331 aa8.33□□□□□ -1.08
TOM1L1-212ENST00000572360 SPSB2Q99619 263 aa8.33□□□□□ -1.08
TOM1L1-212ENST00000572360 SLC6A16Q9GZN6 736 aa8.33□□□□□ -1.08
TOM1L1-212ENST00000572360 SLC27A5Q9Y2P5 690 aa8.33□□□□□ -1.08
TOM1L1-212ENST00000572360 IRF6O14896 467 aa8.31□□□□□ -1.08
TOM1L1-212ENST00000572360 GDF9O60383 454 aa8.31□□□□□ -1.08
TOM1L1-212ENST00000572360 MAP2K5Q13163 448 aa8.31□□□□□ -1.08
TOM1L1-212ENST00000572360 ATP6V1AP38606 617 aa8.3□□□□□ -1.08
TOM1L1-212ENST00000572360 PRR20EP86478 221 aa8.3□□□□□ -1.08
TOM1L1-212ENST00000572360 PRR20CP86479 221 aa8.3□□□□□ -1.08
TOM1L1-212ENST00000572360 PRR20DP86480 221 aa8.3□□□□□ -1.08
TOM1L1-212ENST00000572360 PRR20BP86481 221 aa8.3□□□□□ -1.08
TOM1L1-212ENST00000572360 PRR20AP86496 221 aa8.3□□□□□ -1.08
TOM1L1-212ENST00000572360 RSPH4AQ5TD94 716 aa8.3□□□□□ -1.08
TOM1L1-212ENST00000572360 BRICD5Q6PL45 260 aa8.3□□□□□ -1.08
TOM1L1-212ENST00000572360 PRDM9Q9NQV7 894 aa8.29□□□□□ -1.08
TOM1L1-212ENST00000572360 CD46P15529 392 aa8.28□□□□□ -1.08
TOM1L1-212ENST00000572360 ZNF697Q5TEC3 545 aa8.28□□□□□ -1.08
TOM1L1-212ENST00000572360 RNF19BQ6ZMZ0 732 aa8.28□□□□□ -1.08
TOM1L1-212ENST00000572360 PKD2L1Q9P0L9 805 aa8.28□□□□□ -1.08
TOM1L1-212ENST00000572360 SALL2Q9Y467 1007 aaPredicted RBP8.28□□□□□ -1.08
TOM1L1-212ENST00000572360 SULF1Q8IWU6 871 aa8.27□□□□□ -1.09
TOM1L1-212ENST00000572360 TNFRSF10AO00220 468 aa8.25□□□□□ -1.09
TOM1L1-212ENST00000572360 MYT1Q01538 1121 aa8.25□□□□□ -1.09
TOM1L1-212ENST00000572360 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.25□□□□□ -1.09
TOM1L1-212ENST00000572360 HLA-CQ95604 372 aa8.25□□□□□ -1.09
TOM1L1-212ENST00000572360 MINK1Q8N4C8 1332 aaPredicted RBP8.25□□□□□ -1.09
TOM1L1-212ENST00000572360 FMNL1O95466 1100 aaPredicted RBP8.24□□□□□ -1.09
TOM1L1-212ENST00000572360 CCDC102AQ96A19 550 aa8.24□□□□□ -1.09
TOM1L1-212ENST00000572360 FCF1Q9Y324 198 aaKnown RBP8.24□□□□□ -1.09
TOM1L1-212ENST00000572360 MDM2Q00987 491 aaPredicted RBP8.23□□□□□ -1.09
TOM1L1-212ENST00000572360 REPIN1Q9BWE0 567 aaKnown RBP8.23□□□□□ -1.09
TOM1L1-212ENST00000572360 POTECB2RU33 542 aa8.22□□□□□ -1.09
TOM1L1-212ENST00000572360 MSS51Q4VC12 460 aa8.22□□□□□ -1.09
TOM1L1-212ENST00000572360 DGAT1O75907 488 aa8.21□□□□□ -1.1
TOM1L1-212ENST00000572360 RPIAP49247 311 aa8.21□□□□□ -1.1
TOM1L1-212ENST00000572360 KDM4AO75164 1064 aa8.2□□□□□ -1.1
TOM1L1-212ENST00000572360 FAM217BQ9NTX9 383 aaPredicted RBP8.2□□□□□ -1.1
TOM1L1-212ENST00000572360 MMP16P51512 607 aa8.19□□□□□ -1.1
TOM1L1-212ENST00000572360 TOR4AQ9NXH8 423 aa8.19□□□□□ -1.1
TOM1L1-212ENST00000572360 GUCA2AQ02747 115 aa8.18□□□□□ -1.1
TOM1L1-212ENST00000572360 PKDCCQ504Y2 493 aa8.18□□□□□ -1.1
TOM1L1-212ENST00000572360 ZNF787Q6DD87 383 aa8.18□□□□□ -1.1
TOM1L1-212ENST00000572360 FAM187AA6NFU0 413 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms