RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 ERVK-7P63135 1459 aa27■■□□□ 1.91
RPAIN-210ENST00000571613 IDI1Q13907 227 aa26.98■■□□□ 1.91
RPAIN-210ENST00000571613 CLTCQ00610 1675 aaKnown RBP26.97■■□□□ 1.91
RPAIN-210ENST00000571613 MLECQ14165 292 aa26.96■■□□□ 1.91
RPAIN-210ENST00000571613 VGFO15240 615 aaPredicted RBP26.95■■□□□ 1.9
RPAIN-210ENST00000571613 ADGRF5Q8IZF2 1346 aa26.94■■□□□ 1.9
RPAIN-210ENST00000571613 SLC24A1O60721 1099 aa26.94■■□□□ 1.9
RPAIN-210ENST00000571613 SCAF11Q99590 1463 aaKnown RBP26.94■■□□□ 1.9
RPAIN-210ENST00000571613 PPLO60437 1756 aa26.93■■□□□ 1.9
RPAIN-210ENST00000571613 SPATA31D1Q6ZQQ2 1576 aa26.93■■□□□ 1.9
RPAIN-210ENST00000571613 EIF3AQ14152 1382 aaKnown RBP26.93■■□□□ 1.9
RPAIN-210ENST00000571613 CCER2I3L3R5 266 aa26.92■■□□□ 1.9
RPAIN-210ENST00000571613 ZFYVE9O95405 1425 aa26.91■■□□□ 1.9
RPAIN-210ENST00000571613 FBXO31Q5XUX0 539 aaPredicted RBP26.9■■□□□ 1.9
RPAIN-210ENST00000571613 ZMYM3Q14202 1370 aa26.9■■□□□ 1.9
RPAIN-210ENST00000571613 PIK3C2GO75747 1445 aa26.89■■□□□ 1.89
RPAIN-210ENST00000571613 CENPBP07199 599 aaPredicted RBP26.89■■□□□ 1.89
RPAIN-210ENST00000571613 IQGAP1P46940 1657 aa26.88■■□□□ 1.89
RPAIN-210ENST00000571613 SETBP1Q9Y6X0 1596 aa26.87■■□□□ 1.89
RPAIN-210ENST00000571613 CFAP70Q5T0N1 1121 aa26.87■■□□□ 1.89
RPAIN-210ENST00000571613 TMEM131LA2VDJ0 1609 aa26.86■■□□□ 1.89
RPAIN-210ENST00000571613 NEXMIFQ5QGS0 1516 aa26.86■■□□□ 1.89
RPAIN-210ENST00000571613 TMF1P82094 1093 aa26.86■■□□□ 1.89
RPAIN-210ENST00000571613 C14orf93Q9H972 538 aaKnown RBP26.86■■□□□ 1.89
RPAIN-210ENST00000571613 TESK2Q96S53 571 aa26.85■■□□□ 1.89
RPAIN-210ENST00000571613 STAG3Q9UJ98 1225 aa26.84■■□□□ 1.89
RPAIN-210ENST00000571613 CDCA8Q53HL2 280 aa26.82■■□□□ 1.88
RPAIN-210ENST00000571613 POLR3GLQ9BT43 218 aa26.82■■□□□ 1.88
RPAIN-210ENST00000571613 TNRQ92752 1358 aa26.75■■□□□ 1.87
RPAIN-210ENST00000571613 A2ML1A8K2U0 1454 aa26.73■■□□□ 1.87
RPAIN-210ENST00000571613 YTHDC1Q96MU7 727 aaKnown RBP26.73■■□□□ 1.87
RPAIN-210ENST00000571613 HDGFP51858 240 aaKnown RBP26.73■■□□□ 1.87
RPAIN-210ENST00000571613 PRKRIP1Q9H875 184 aaPredicted RBP26.73■■□□□ 1.87
RPAIN-210ENST00000571613 SBNO2Q9Y2G9 1366 aa26.72■■□□□ 1.87
RPAIN-210ENST00000571613 ADGRB1O14514 1584 aa26.72■■□□□ 1.87
RPAIN-210ENST00000571613 MYO5BQ9ULV0 1848 aa26.72■■□□□ 1.87
RPAIN-210ENST00000571613 DISP3Q9P2K9 1392 aa26.72■■□□□ 1.87
RPAIN-210ENST00000571613 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.71■■□□□ 1.87
RPAIN-210ENST00000571613 MYO3AQ8NEV4 1616 aa26.69■■□□□ 1.86
RPAIN-210ENST00000571613 KDM5AP29375 1690 aaKnown RBP26.69■■□□□ 1.86
RPAIN-210ENST00000571613 KTN1Q86UP2 1357 aaKnown RBP26.67■■□□□ 1.86
RPAIN-210ENST00000571613 CENPJQ9HC77 1338 aaPredicted RBP26.66■■□□□ 1.86
RPAIN-210ENST00000571613 NLRP1Q9C000 1473 aa26.66■■□□□ 1.86
RPAIN-210ENST00000571613 NUTM2DQ5VT03 806 aaPredicted RBP26.66■■□□□ 1.86
RPAIN-210ENST00000571613 RIMS2Q9UQ26 1411 aa26.66■■□□□ 1.86
RPAIN-210ENST00000571613 FER1L4A9Z1Z3 1794 aa26.62■■□□□ 1.85
RPAIN-210ENST00000571613 TRAK1Q9UPV9 953 aa26.62■■□□□ 1.85
RPAIN-210ENST00000571613 TMEM132EQ6IEE7 984 aa26.61■■□□□ 1.85
RPAIN-210ENST00000571613 RALBP1Q15311 655 aa26.57■■□□□ 1.84
RPAIN-210ENST00000571613 C3P01024 1663 aa26.57■■□□□ 1.84
RPAIN-210ENST00000571613 ALKQ9UM73 1620 aa26.56■■□□□ 1.84
RPAIN-210ENST00000571613 PUS7Q96PZ0 661 aaKnown RBP26.56■■□□□ 1.84
RPAIN-210ENST00000571613 PER1O15534 1290 aaPredicted RBP26.54■■□□□ 1.84
RPAIN-210ENST00000571613 PANK3Q9H999 370 aa26.54■■□□□ 1.84
RPAIN-210ENST00000571613 TMEM2Q9UHN6 1383 aa26.54■■□□□ 1.84
RPAIN-210ENST00000571613 UBR1Q8IWV7 1749 aa26.53■■□□□ 1.84
RPAIN-210ENST00000571613 YTHDC2Q9H6S0 1430 aaKnown RBP26.52■■□□□ 1.84
RPAIN-210ENST00000571613 ASXL1Q8IXJ9 1541 aa26.51■■□□□ 1.83
RPAIN-210ENST00000571613 CEBPAP49715 358 aaPredicted RBP26.51■■□□□ 1.83
RPAIN-210ENST00000571613 QRICH2Q9H0J4 1663 aa26.51■■□□□ 1.83
RPAIN-210ENST00000571613 ARHGEF28Q8N1W1 1705 aaKnown RBP26.5■■□□□ 1.83
RPAIN-210ENST00000571613 MRS2Q9HD23 443 aa26.48■■□□□ 1.83
RPAIN-210ENST00000571613 EVC2Q86UK5 1308 aa26.48■■□□□ 1.83
RPAIN-210ENST00000571613 KNSTRNQ9Y448 316 aa26.46■■□□□ 1.83
RPAIN-210ENST00000571613 LRPPRCP42704 1394 aaKnown RBP26.45■■□□□ 1.83
RPAIN-210ENST00000571613 THEMISQ8N1K5 641 aaPredicted RBP26.45■■□□□ 1.82
RPAIN-210ENST00000571613 MYBBP1AQ9BQG0 1328 aaKnown RBP26.45■■□□□ 1.82
RPAIN-210ENST00000571613 DLC1Q96QB1 1528 aa26.45■■□□□ 1.82
RPAIN-210ENST00000571613 EID1Q9Y6B2 187 aa26.44■■□□□ 1.82
RPAIN-210ENST00000571613 STK26Q9P289 416 aa26.44■■□□□ 1.82
RPAIN-210ENST00000571613 PARD3Q8TEW0 1356 aa26.43■■□□□ 1.82
RPAIN-210ENST00000571613 ABCC11Q96J66 1382 aa26.43■■□□□ 1.82
RPAIN-210ENST00000571613 PTPRMP28827 1452 aa26.42■■□□□ 1.82
RPAIN-210ENST00000571613 POGKQ9P215 609 aa26.42■■□□□ 1.82
RPAIN-210ENST00000571613 NPC1L1Q9UHC9 1359 aa26.41■■□□□ 1.82
RPAIN-210ENST00000571613 PLEKHG1Q9ULL1 1385 aa26.41■■□□□ 1.82
RPAIN-210ENST00000571613 SLIT1O75093 1534 aa26.41■■□□□ 1.82
RPAIN-210ENST00000571613 BRD4O60885 1362 aaPredicted RBP26.41■■□□□ 1.82
RPAIN-210ENST00000571613 MYOM1P52179 1685 aa26.4■■□□□ 1.82
RPAIN-210ENST00000571613 SETD1AO15047 1707 aaKnown RBP26.4■■□□□ 1.82
RPAIN-210ENST00000571613 ADAMTSL3P82987 1691 aa26.4■■□□□ 1.82
RPAIN-210ENST00000571613 ARHGAP23Q9P227 1491 aa26.4■■□□□ 1.82
RPAIN-210ENST00000571613 NRXN3Q9Y4C0 1643 aa26.39■■□□□ 1.82
RPAIN-210ENST00000571613 SIRT1Q96EB6 747 aa26.39■■□□□ 1.82
RPAIN-210ENST00000571613 PRAM1Q96QH2 718 aa26.38■■□□□ 1.81
RPAIN-210ENST00000571613 TXNDC2Q86VQ3 553 aa26.38■■□□□ 1.81
RPAIN-210ENST00000571613 BCANQ96GW7 911 aa26.38■■□□□ 1.81
RPAIN-210ENST00000571613 RIMS1Q86UR5 1692 aaKnown RBP26.38■■□□□ 1.81
RPAIN-210ENST00000571613 NINLQ9Y2I6 1382 aa26.37■■□□□ 1.81
RPAIN-210ENST00000571613 CCDC184Q52MB2 194 aa26.36■■□□□ 1.81
RPAIN-210ENST00000571613 NLRP13Q86W25 1043 aa26.36■■□□□ 1.81
RPAIN-210ENST00000571613 TMC1Q8TDI8 760 aa26.36■■□□□ 1.81
RPAIN-210ENST00000571613 CNGB1Q14028 1251 aaPredicted RBP26.35■■□□□ 1.81
RPAIN-210ENST00000571613 PLPPR3Q6T4P5 718 aa26.34■■□□□ 1.81
RPAIN-210ENST00000571613 SENP3Q9H4L4 574 aaPredicted RBP26.34■■□□□ 1.81
RPAIN-210ENST00000571613 TULP4Q9NRJ4 1543 aa26.33■■□□□ 1.81
RPAIN-210ENST00000571613 TECPR2O15040 1411 aa26.33■■□□□ 1.81
RPAIN-210ENST00000571613 AMER1Q5JTC6 1135 aaPredicted RBP26.33■■□□□ 1.81
RPAIN-210ENST00000571613 ATAD2Q6PL18 1390 aa26.33■■□□□ 1.81
RPAIN-210ENST00000571613 FAM135BQ49AJ0 1406 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms