RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 MSH6P52701 1360 aa11.7□□□□□ -0.54
SMG6-205ENST00000570659 RSPH4AQ5TD94 716 aa11.7□□□□□ -0.54
SMG6-205ENST00000570659 ABCC5O15440 1437 aa11.69□□□□□ -0.54
SMG6-205ENST00000570659 KIF15Q9NS87 1388 aa11.69□□□□□ -0.54
SMG6-205ENST00000570659 NUTM2BA6NNL0 878 aaPredicted RBP11.69□□□□□ -0.54
SMG6-205ENST00000570659 NUTM2EB1AL46 878 aaPredicted RBP11.69□□□□□ -0.54
SMG6-205ENST00000570659 NUTM2AQ8IVF1 878 aaPredicted RBP11.69□□□□□ -0.54
SMG6-205ENST00000570659 RRP7BPQ9NSQ0 103 aa11.69□□□□□ -0.54
SMG6-205ENST00000570659 FGD6Q6ZV73 1430 aa11.69□□□□□ -0.54
SMG6-205ENST00000570659 AFF2P51816 1311 aa11.68□□□□□ -0.54
SMG6-205ENST00000570659 DDX17Q92841 729 aaKnown RBP11.68□□□□□ -0.54
SMG6-205ENST00000570659 GCC2Q8IWJ2 1684 aa11.68□□□□□ -0.54
SMG6-205ENST00000570659 ADAMTS13Q76LX8 1427 aa11.68□□□□□ -0.54
SMG6-205ENST00000570659 PTPRUQ92729 1446 aa11.68□□□□□ -0.54
SMG6-205ENST00000570659 SPATA31A6Q5VVP1 1343 aa11.67□□□□□ -0.54
SMG6-205ENST00000570659 LMTK2Q8IWU2 1503 aa11.67□□□□□ -0.54
SMG6-205ENST00000570659 RXRBP28702 533 aa11.67□□□□□ -0.54
SMG6-205ENST00000570659 NUTM2DQ5VT03 806 aaPredicted RBP11.67□□□□□ -0.54
SMG6-205ENST00000570659 CDK12Q9NYV4 1490 aaPredicted RBP11.67□□□□□ -0.54
SMG6-205ENST00000570659 MEX3CQ5U5Q3 659 aaKnown RBP11.66□□□□□ -0.54
SMG6-205ENST00000570659 ZNF772Q68DY9 489 aaPredicted RBP11.66□□□□□ -0.54
SMG6-205ENST00000570659 TMEM131LA2VDJ0 1609 aa11.65□□□□□ -0.54
SMG6-205ENST00000570659 BRINP3Q76B58 766 aa11.65□□□□□ -0.54
SMG6-205ENST00000570659 MYOM3Q5VTT5 1437 aa11.65□□□□□ -0.54
SMG6-205ENST00000570659 ERBINQ96RT1 1412 aa11.65□□□□□ -0.54
SMG6-205ENST00000570659 STAG3Q9UJ98 1225 aa11.64□□□□□ -0.55
SMG6-205ENST00000570659 PLEKHG1Q9ULL1 1385 aa11.64□□□□□ -0.55
SMG6-205ENST00000570659 NHSL1Q5SYE7 1610 aa11.64□□□□□ -0.55
SMG6-205ENST00000570659 RIMS2Q9UQ26 1411 aa11.63□□□□□ -0.55
SMG6-205ENST00000570659 ASXL1Q8IXJ9 1541 aa11.63□□□□□ -0.55
SMG6-205ENST00000570659 EP400Q96L91 3159 aa11.62□□□□□ -0.55
SMG6-205ENST00000570659 DAPK1P53355 1430 aa11.61□□□□□ -0.55
SMG6-205ENST00000570659 NRXN3Q9Y4C0 1643 aa11.61□□□□□ -0.55
SMG6-205ENST00000570659 BCANQ96GW7 911 aa11.61□□□□□ -0.55
SMG6-205ENST00000570659 CHIC2Q9UKJ5 165 aa11.61□□□□□ -0.55
SMG6-205ENST00000570659 MST1RQ04912 1400 aa11.6□□□□□ -0.55
SMG6-205ENST00000570659 PTPN23Q9H3S7 1636 aa11.6□□□□□ -0.55
SMG6-205ENST00000570659 PNPLA6Q8IY17 1366 aa11.6□□□□□ -0.55
SMG6-205ENST00000570659 SETD5Q9C0A6 1442 aa11.6□□□□□ -0.55
SMG6-205ENST00000570659 C8orf37Q96NL8 207 aa11.59□□□□□ -0.55
SMG6-205ENST00000570659 QTRT2Q9H974 415 aaKnown RBP11.59□□□□□ -0.55
SMG6-205ENST00000570659 XRN1Q8IZH2 1706 aaKnown RBP11.59□□□□□ -0.55
SMG6-205ENST00000570659 UNC13BO14795 1591 aa11.58□□□□□ -0.56
SMG6-205ENST00000570659 TRPM2O94759 1503 aa11.57□□□□□ -0.56
SMG6-205ENST00000570659 C14orf37Q86TY3 774 aa11.57□□□□□ -0.56
SMG6-205ENST00000570659 C19orf44Q9H6X5 657 aa11.57□□□□□ -0.56
SMG6-205ENST00000570659 TBX22Q9Y458 520 aa11.57□□□□□ -0.56
SMG6-205ENST00000570659 NALCNQ8IZF0 1738 aa11.56□□□□□ -0.56
SMG6-205ENST00000570659 NCOA3Q9Y6Q9 1424 aa11.56□□□□□ -0.56
SMG6-205ENST00000570659 E9PCH4 1651 aa11.55□□□□□ -0.56
SMG6-205ENST00000570659 VPS8Q8N3P4 1428 aa11.55□□□□□ -0.56
SMG6-205ENST00000570659 ADAMTS2O95450 1211 aa11.55□□□□□ -0.56
SMG6-205ENST00000570659 RBM6P78332 1123 aaKnown RBP11.55□□□□□ -0.56
SMG6-205ENST00000570659 CADPS2Q86UW7 1296 aa11.54□□□□□ -0.56
SMG6-205ENST00000570659 AMOTL2Q9Y2J4 779 aa11.54□□□□□ -0.56
SMG6-205ENST00000570659 KANK1Q14678 1352 aa11.54□□□□□ -0.56
SMG6-205ENST00000570659 ATF3P18847 181 aa11.53□□□□□ -0.56
SMG6-205ENST00000570659 SLC52A1Q9NWF4 448 aa11.53□□□□□ -0.56
SMG6-205ENST00000570659 METP08581 1390 aa11.53□□□□□ -0.56
SMG6-205ENST00000570659 PPP1R15AO75807 674 aaPredicted RBP11.52□□□□□ -0.57
SMG6-205ENST00000570659 ATRNO75882 1429 aa11.51□□□□□ -0.57
SMG6-205ENST00000570659 LAMC1P11047 1609 aa11.5□□□□□ -0.57
SMG6-205ENST00000570659 LOC105371045A0A1W2PR82 267 aa11.5□□□□□ -0.57
SMG6-205ENST00000570659 CHGAP10645 457 aaKnown RBP11.5□□□□□ -0.57
SMG6-205ENST00000570659 ATAD2Q6PL18 1390 aa11.5□□□□□ -0.57
SMG6-205ENST00000570659 ADGRL2O95490 1459 aa11.5□□□□□ -0.57
SMG6-205ENST00000570659 RPRD2Q5VT52 1461 aaKnown RBP11.5□□□□□ -0.57
SMG6-205ENST00000570659 DCCP43146 1447 aa11.49□□□□□ -0.57
SMG6-205ENST00000570659 BCL9LQ86UU0 1499 aa11.49□□□□□ -0.57
SMG6-205ENST00000570659 DEFB132Q7Z7B7 95 aa11.48□□□□□ -0.57
SMG6-205ENST00000570659 NGLY1Q96IV0 654 aa11.48□□□□□ -0.57
SMG6-205ENST00000570659 ORAI2Q96SN7 254 aa11.48□□□□□ -0.57
SMG6-205ENST00000570659 PIK3R4Q99570 1358 aa11.48□□□□□ -0.57
SMG6-205ENST00000570659 ANKRD30AQ9BXX3 1397 aa11.48□□□□□ -0.57
SMG6-205ENST00000570659 BRWD3Q6RI45 1802 aa11.48□□□□□ -0.57
SMG6-205ENST00000570659 GLI3P10071 1580 aa11.47□□□□□ -0.57
SMG6-205ENST00000570659 C1orf167Q5SNV9 1468 aa11.47□□□□□ -0.57
SMG6-205ENST00000570659 ADGRL3Q9HAR2 1447 aa11.47□□□□□ -0.57
SMG6-205ENST00000570659 ZRANB1Q9UGI0 708 aa11.47□□□□□ -0.57
SMG6-205ENST00000570659 USP21Q9UK80 565 aa11.47□□□□□ -0.57
SMG6-205ENST00000570659 LRRC59Q96AG4 307 aaKnown RBP11.46□□□□□ -0.57
SMG6-205ENST00000570659 COL22A1Q8NFW1 1626 aaPredicted RBP11.46□□□□□ -0.58
SMG6-205ENST00000570659 MYOM2P54296 1465 aa11.45□□□□□ -0.58
SMG6-205ENST00000570659 ANKRD50Q9ULJ7 1429 aa11.45□□□□□ -0.58
SMG6-205ENST00000570659 FNBP4Q8N3X1 1017 aaPredicted RBP11.45□□□□□ -0.58
SMG6-205ENST00000570659 SOS2Q07890 1332 aaPredicted RBP11.44□□□□□ -0.58
SMG6-205ENST00000570659 LRP5O75197 1615 aa11.44□□□□□ -0.58
SMG6-205ENST00000570659 MARF1Q9Y4F3 1742 aaKnown RBP11.43□□□□□ -0.58
SMG6-205ENST00000570659 IQGAP3Q86VI3 1631 aa11.42□□□□□ -0.58
SMG6-205ENST00000570659 ROBO2Q9HCK4 1378 aa11.42□□□□□ -0.58
SMG6-205ENST00000570659 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.42□□□□□ -0.58
SMG6-205ENST00000570659 NEXMIFQ5QGS0 1516 aa11.41□□□□□ -0.58
SMG6-205ENST00000570659 PXDNQ92626 1479 aa11.41□□□□□ -0.58
SMG6-205ENST00000570659 XPCQ01831 940 aaPredicted RBP11.41□□□□□ -0.58
SMG6-205ENST00000570659 TRPC5Q9UL62 973 aaPredicted RBP11.41□□□□□ -0.58
SMG6-205ENST00000570659 RALGAPBQ86X10 1494 aa11.4□□□□□ -0.58
SMG6-205ENST00000570659 PSDA5PKW4 1024 aaPredicted RBP11.4□□□□□ -0.58
SMG6-205ENST00000570659 PTCH1Q13635 1447 aa11.4□□□□□ -0.58
SMG6-205ENST00000570659 CLTCL1P53675 1640 aa11.38□□□□□ -0.59
SMG6-205ENST00000570659 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms