RNA–Protein interactions for RNA: ENST00000570623.1

TOM1L1-206, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1L1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-206ENST00000570623 VPS9D1Q9Y2B5 631 aa9.96□□□□□ -0.82
TOM1L1-206ENST00000570623 A6NJR5 290 aa9.95□□□□□ -0.82
TOM1L1-206ENST00000570623 MCM6Q14566 821 aa9.95□□□□□ -0.82
TOM1L1-206ENST00000570623 RBM46Q8TBY0 533 aaKnown RBP9.95□□□□□ -0.82
TOM1L1-206ENST00000570623 NLRP7Q8WX94 980 aa9.95□□□□□ -0.82
TOM1L1-206ENST00000570623 CDCA7LQ96GN5 454 aa9.94□□□□□ -0.82
TOM1L1-206ENST00000570623 DIXDC1Q155Q3 683 aa9.93□□□□□ -0.82
TOM1L1-206ENST00000570623 C1orf115Q9H7X2 142 aa9.93□□□□□ -0.82
TOM1L1-206ENST00000570623 UBTFP17480 764 aaKnown RBP9.92□□□□□ -0.82
TOM1L1-206ENST00000570623 MYSM1Q5VVJ2 828 aa9.92□□□□□ -0.82
TOM1L1-206ENST00000570623 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.91□□□□□ -0.82
TOM1L1-206ENST00000570623 PROCA1Q8NCQ7 364 aaPredicted RBP9.91□□□□□ -0.82
TOM1L1-206ENST00000570623 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.91□□□□□ -0.82
TOM1L1-206ENST00000570623 POLR3EQ9NVU0 708 aa9.91□□□□□ -0.82
TOM1L1-206ENST00000570623 CLUAP1Q96AJ1 413 aa9.9□□□□□ -0.82
TOM1L1-206ENST00000570623 KCNH8Q96L42 1107 aa9.9□□□□□ -0.82
TOM1L1-206ENST00000570623 APBB1O00213 710 aa9.89□□□□□ -0.83
TOM1L1-206ENST00000570623 CLK2P49760 499 aaKnown RBP9.89□□□□□ -0.83
TOM1L1-206ENST00000570623 BCL2L12Q9HB09 334 aa9.89□□□□□ -0.83
TOM1L1-206ENST00000570623 ATP1B4Q9UN42 357 aaPredicted RBP9.89□□□□□ -0.83
TOM1L1-206ENST00000570623 ARID3CA6NKF2 412 aa9.88□□□□□ -0.83
TOM1L1-206ENST00000570623 TRAK2O60296 914 aa9.88□□□□□ -0.83
TOM1L1-206ENST00000570623 THSD4Q6ZMP0 1018 aa9.88□□□□□ -0.83
TOM1L1-206ENST00000570623 TBC1D2Q9BYX2 928 aa9.88□□□□□ -0.83
TOM1L1-206ENST00000570623 RCCD1A6NED2 376 aa9.87□□□□□ -0.83
TOM1L1-206ENST00000570623 BHMG1C9JSJ3 638 aaPredicted RBP9.87□□□□□ -0.83
TOM1L1-206ENST00000570623 FAM198AQ9UFP1 575 aa9.87□□□□□ -0.83
TOM1L1-206ENST00000570623 PPP1R3GB7ZBB8 358 aa9.86□□□□□ -0.83
TOM1L1-206ENST00000570623 COL9A1P20849 921 aa9.86□□□□□ -0.83
TOM1L1-206ENST00000570623 EYA1Q99502 592 aa9.86□□□□□ -0.83
TOM1L1-206ENST00000570623 ARID3AQ99856 593 aa9.86□□□□□ -0.83
TOM1L1-206ENST00000570623 A0A0G2JS52 829 aa9.85□□□□□ -0.83
TOM1L1-206ENST00000570623 SPDYE5A6NIY4 337 aa9.85□□□□□ -0.83
TOM1L1-206ENST00000570623 IRX2Q9BZI1 471 aaPredicted RBP9.85□□□□□ -0.83
TOM1L1-206ENST00000570623 PTPREP23469 700 aa9.84□□□□□ -0.83
TOM1L1-206ENST00000570623 IFFO2Q5TF58 517 aa9.84□□□□□ -0.83
TOM1L1-206ENST00000570623 SULF1Q8IWU6 871 aa9.84□□□□□ -0.83
TOM1L1-206ENST00000570623 BANK1Q8NDB2 785 aa9.84□□□□□ -0.83
TOM1L1-206ENST00000570623 SLC4A5Q9BY07 1137 aa9.84□□□□□ -0.83
TOM1L1-206ENST00000570623 NBPF26B4DH59 902 aa9.83□□□□□ -0.84
TOM1L1-206ENST00000570623 RGS20O76081 388 aa9.83□□□□□ -0.84
TOM1L1-206ENST00000570623 CD46P15529 392 aa9.83□□□□□ -0.84
TOM1L1-206ENST00000570623 PROSER2Q86WR7 435 aaPredicted RBP9.83□□□□□ -0.84
TOM1L1-206ENST00000570623 WNT2BQ93097 391 aa9.83□□□□□ -0.84
TOM1L1-206ENST00000570623 ZBED2Q9BTP6 218 aa9.83□□□□□ -0.84
TOM1L1-206ENST00000570623 TSKSQ9UJT2 592 aa9.83□□□□□ -0.84
TOM1L1-206ENST00000570623 RAD21O60216 631 aa9.82□□□□□ -0.84
TOM1L1-206ENST00000570623 DNAJB2P25686 324 aa9.82□□□□□ -0.84
TOM1L1-206ENST00000570623 RFC5P40937 340 aa9.82□□□□□ -0.84
TOM1L1-206ENST00000570623 TUSC1Q2TAM9 212 aa9.82□□□□□ -0.84
TOM1L1-206ENST00000570623 SPIRE2Q8WWL2 714 aa9.82□□□□□ -0.84
TOM1L1-206ENST00000570623 PPP2R2DQ66LE6 453 aa9.81□□□□□ -0.84
TOM1L1-206ENST00000570623 NUDT18Q6ZVK8 323 aa9.81□□□□□ -0.84
TOM1L1-206ENST00000570623 LIMD1Q9UGP4 676 aa9.81□□□□□ -0.84
TOM1L1-206ENST00000570623 GOLGA8CPA6NN73 597 aa9.8□□□□□ -0.84
TOM1L1-206ENST00000570623 TRIM6-TRIM34B2RNG4 842 aa9.8□□□□□ -0.84
TOM1L1-206ENST00000570623 TMEM259Q4ZIN3 620 aa9.8□□□□□ -0.84
TOM1L1-206ENST00000570623 RIC3Q7Z5B4 369 aa9.8□□□□□ -0.84
TOM1L1-206ENST00000570623 SPTLC1O15269 473 aa9.79□□□□□ -0.84
TOM1L1-206ENST00000570623 PACS2Q86VP3 889 aa9.79□□□□□ -0.84
TOM1L1-206ENST00000570623 NUTM1Q86Y26 1132 aa9.79□□□□□ -0.84
TOM1L1-206ENST00000570623 FNBP4Q8N3X1 1017 aaPredicted RBP9.79□□□□□ -0.84
TOM1L1-206ENST00000570623 MRPL50Q8N5N7 158 aaKnown RBP9.79□□□□□ -0.84
TOM1L1-206ENST00000570623 TATDN2Q93075 761 aa9.79□□□□□ -0.84
TOM1L1-206ENST00000570623 TMEM134Q9H6X4 195 aa9.79□□□□□ -0.84
TOM1L1-206ENST00000570623 GJA5P36382 358 aa9.78□□□□□ -0.84
TOM1L1-206ENST00000570623 CCDC82Q8N4S0 544 aa9.78□□□□□ -0.84
TOM1L1-206ENST00000570623 POM121Q96HA1 1249 aa9.78□□□□□ -0.84
TOM1L1-206ENST00000570623 PNMA3Q9UL41 463 aa9.78□□□□□ -0.84
TOM1L1-206ENST00000570623 DDX11L8A8MPP1 907 aa9.77□□□□□ -0.85
TOM1L1-206ENST00000570623 RSBN1LQ6PCB5 846 aaPredicted RBP9.77□□□□□ -0.85
TOM1L1-206ENST00000570623 C3orf80F5H4A9 247 aa9.76□□□□□ -0.85
TOM1L1-206ENST00000570623 COG6Q9Y2V7 657 aa9.76□□□□□ -0.85
TOM1L1-206ENST00000570623 FBXO31Q5XUX0 539 aaPredicted RBP9.75□□□□□ -0.85
TOM1L1-206ENST00000570623 SNRKQ9NRH2 765 aa9.75□□□□□ -0.85
TOM1L1-206ENST00000570623 SOCS7O14512 581 aa9.74□□□□□ -0.85
TOM1L1-206ENST00000570623 MOXD2PA6NHM9 499 aa9.73□□□□□ -0.85
TOM1L1-206ENST00000570623 ZNF777Q9ULD5 760 aaPredicted RBP9.73□□□□□ -0.85
TOM1L1-206ENST00000570623 LILRB3O75022 631 aa9.71□□□□□ -0.86
TOM1L1-206ENST00000570623 PROX2Q3B8N5 592 aa9.71□□□□□ -0.86
TOM1L1-206ENST00000570623 RDH13Q8NBN7 331 aa9.71□□□□□ -0.86
TOM1L1-206ENST00000570623 MTMR14Q8NCE2 650 aa9.71□□□□□ -0.86
TOM1L1-206ENST00000570623 NBPF3Q9H094 633 aa9.71□□□□□ -0.86
TOM1L1-206ENST00000570623 SMAPO00193 183 aa9.7□□□□□ -0.86
TOM1L1-206ENST00000570623 KDM4AO75164 1064 aa9.7□□□□□ -0.86
TOM1L1-206ENST00000570623 USP46P62068 366 aa9.7□□□□□ -0.86
TOM1L1-206ENST00000570623 CSPP1Q1MSJ5 1256 aa9.7□□□□□ -0.86
TOM1L1-206ENST00000570623 RSPH4AQ5TD94 716 aa9.7□□□□□ -0.86
TOM1L1-206ENST00000570623 SERPINA10Q9UK55 444 aa9.7□□□□□ -0.86
TOM1L1-206ENST00000570623 NDUFV2P19404 249 aa9.69□□□□□ -0.86
TOM1L1-206ENST00000570623 QPCTQ16769 361 aa9.69□□□□□ -0.86
TOM1L1-206ENST00000570623 PRPF38BQ5VTL8 546 aaKnown RBP9.69□□□□□ -0.86
TOM1L1-206ENST00000570623 CCDC97Q96F63 343 aaPredicted RBP9.69□□□□□ -0.86
TOM1L1-206ENST00000570623 BCAMP50895 628 aa9.68□□□□□ -0.86
TOM1L1-206ENST00000570623 ITGBL1O95965 494 aaPredicted RBP9.67□□□□□ -0.86
TOM1L1-206ENST00000570623 WWC1Q8IX03 1113 aa9.67□□□□□ -0.86
TOM1L1-206ENST00000570623 PRM3Q9NNZ6 103 aa9.67□□□□□ -0.86
TOM1L1-206ENST00000570623 PODXL2Q9NZ53 605 aa9.67□□□□□ -0.86
TOM1L1-206ENST00000570623 KIAA1468Q9P260 1216 aa9.67□□□□□ -0.86
TOM1L1-206ENST00000570623 ZNF330Q9Y3S2 320 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms