RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 HOXB3P14651 431 aaPredicted RBP10.42□□□□□ -0.74
UBFD1-209ENST00000569919 DOK7Q18PE1 504 aa10.42□□□□□ -0.74
UBFD1-209ENST00000569919 CCDC102AQ96A19 550 aa10.42□□□□□ -0.74
UBFD1-209ENST00000569919 RBM33Q96EV2 1170 aaKnown RBP10.42□□□□□ -0.74
UBFD1-209ENST00000569919 SCUBE2Q9NQ36 999 aa10.42□□□□□ -0.74
UBFD1-209ENST00000569919 UACAQ9BZF9 1416 aa10.41□□□□□ -0.74
UBFD1-209ENST00000569919 TYW1BQ6NUM6 668 aa10.41□□□□□ -0.74
UBFD1-209ENST00000569919 CDHR5Q9HBB8 845 aa10.41□□□□□ -0.74
UBFD1-209ENST00000569919 KIF27Q86VH2 1401 aa10.41□□□□□ -0.74
UBFD1-209ENST00000569919 EPRSP07814 1512 aaKnown RBP10.4□□□□□ -0.74
UBFD1-209ENST00000569919 ARSIQ5FYB1 569 aa10.4□□□□□ -0.74
UBFD1-209ENST00000569919 MAMSTRQ6ZN01 415 aa10.4□□□□□ -0.74
UBFD1-209ENST00000569919 KHSRPQ92945 711 aaKnown RBP eCLIP10.4□□□□□ -0.74
UBFD1-209ENST00000569919 KDM4CQ9H3R0 1056 aa10.4□□□□□ -0.74
UBFD1-209ENST00000569919 NPDC1Q9NQX5 325 aaPredicted RBP10.4□□□□□ -0.74
UBFD1-209ENST00000569919 CARMIL1Q5VZK9 1371 aa10.39□□□□□ -0.75
UBFD1-209ENST00000569919 NUDT7P0C024 238 aa10.39□□□□□ -0.75
UBFD1-209ENST00000569919 FOSBP53539 338 aa10.38□□□□□ -0.75
UBFD1-209ENST00000569919 TSR1Q2NL82 804 aaKnown RBP10.38□□□□□ -0.75
UBFD1-209ENST00000569919 FBXW7Q969H0 707 aa10.38□□□□□ -0.75
UBFD1-209ENST00000569919 CUL7Q14999 1698 aa10.38□□□□□ -0.75
UBFD1-209ENST00000569919 RIMBP2O15034 1052 aa10.37□□□□□ -0.75
UBFD1-209ENST00000569919 ZSWIM6Q9HCJ5 1215 aa10.37□□□□□ -0.75
UBFD1-209ENST00000569919 KDM5BQ9UGL1 1544 aa10.37□□□□□ -0.75
UBFD1-209ENST00000569919 MAP3K4Q9Y6R4 1608 aa10.36□□□□□ -0.75
UBFD1-209ENST00000569919 GPR153Q6NV75 609 aa10.36□□□□□ -0.75
UBFD1-209ENST00000569919 ZNF710Q8N1W2 664 aa10.35□□□□□ -0.75
UBFD1-209ENST00000569919 ZNF454Q8N9F8 522 aa10.35□□□□□ -0.75
UBFD1-209ENST00000569919 AMHR2Q16671 573 aa10.34□□□□□ -0.75
UBFD1-209ENST00000569919 IL27Q8NEV9 243 aa10.34□□□□□ -0.75
UBFD1-209ENST00000569919 ZDHHC16Q969W1 377 aa10.34□□□□□ -0.75
UBFD1-209ENST00000569919 KCNH8Q96L42 1107 aa10.34□□□□□ -0.75
UBFD1-209ENST00000569919 C6orf132Q5T0Z8 1188 aa10.33□□□□□ -0.76
UBFD1-209ENST00000569919 CD109Q6YHK3 1445 aa10.33□□□□□ -0.76
UBFD1-209ENST00000569919 IQGAP2Q13576 1575 aa10.32□□□□□ -0.76
UBFD1-209ENST00000569919 DAXXQ9UER7 740 aaPredicted RBP10.31□□□□□ -0.76
UBFD1-209ENST00000569919 MAGI3Q5TCQ9 1506 aa10.31□□□□□ -0.76
UBFD1-209ENST00000569919 DISP1Q96F81 1524 aa10.31□□□□□ -0.76
UBFD1-209ENST00000569919 WDR7Q9Y4E6 1490 aa10.3□□□□□ -0.76
UBFD1-209ENST00000569919 PARP9Q8IXQ6 854 aa10.3□□□□□ -0.76
UBFD1-209ENST00000569919 ADAM33Q9BZ11 813 aa10.3□□□□□ -0.76
UBFD1-209ENST00000569919 ZCCHC11Q5TAX3 1644 aaKnown RBP10.29□□□□□ -0.76
UBFD1-209ENST00000569919 FAM9AQ8IZU1 332 aaPredicted RBP10.29□□□□□ -0.76
UBFD1-209ENST00000569919 CERKQ8TCT0 537 aa10.29□□□□□ -0.76
UBFD1-209ENST00000569919 TIMELESSQ9UNS1 1208 aa10.29□□□□□ -0.76
UBFD1-209ENST00000569919 LHX6Q9UPM6 363 aa10.29□□□□□ -0.76
UBFD1-209ENST00000569919 TTLL12Q14166 644 aaPredicted RBP10.28□□□□□ -0.76
UBFD1-209ENST00000569919 FAM117AQ9C073 453 aa10.28□□□□□ -0.76
UBFD1-209ENST00000569919 SNPHO15079 494 aa10.27□□□□□ -0.77
UBFD1-209ENST00000569919 UGGT2Q9NYU1 1516 aa10.27□□□□□ -0.77
UBFD1-209ENST00000569919 PHLDB1Q86UU1 1377 aa10.26□□□□□ -0.77
UBFD1-209ENST00000569919 PTPRMP28827 1452 aa10.25□□□□□ -0.77
UBFD1-209ENST00000569919 LMTK3Q96Q04 1460 aa10.25□□□□□ -0.77
UBFD1-209ENST00000569919 ARAP3Q8WWN8 1544 aa10.25□□□□□ -0.77
UBFD1-209ENST00000569919 PADI6Q6TGC4 694 aa10.25□□□□□ -0.77
UBFD1-209ENST00000569919 CFAP43Q8NDM7 1665 aa10.25□□□□□ -0.77
UBFD1-209ENST00000569919 FAM161AQ3B820 660 aa10.24□□□□□ -0.77
UBFD1-209ENST00000569919 PPP4R3BQ5MIZ7 849 aa10.24□□□□□ -0.77
UBFD1-209ENST00000569919 PHOX2BQ99453 314 aa10.24□□□□□ -0.77
UBFD1-209ENST00000569919 RAPGEF2Q9Y4G8 1499 aa10.23□□□□□ -0.77
UBFD1-209ENST00000569919 PSDA5PKW4 1024 aaPredicted RBP10.23□□□□□ -0.77
UBFD1-209ENST00000569919 HOXB1P14653 301 aaPredicted RBP10.23□□□□□ -0.77
UBFD1-209ENST00000569919 DDRGK1Q96HY6 314 aa10.23□□□□□ -0.77
UBFD1-209ENST00000569919 REPIN1Q9BWE0 567 aaKnown RBP10.23□□□□□ -0.77
UBFD1-209ENST00000569919 ARID4BQ4LE39 1312 aaPredicted RBP10.23□□□□□ -0.77
UBFD1-209ENST00000569919 PLEKHG3A1L390 1219 aa10.22□□□□□ -0.77
UBFD1-209ENST00000569919 OATP04181 439 aa10.22□□□□□ -0.77
UBFD1-209ENST00000569919 GIGYF2Q6Y7W6 1299 aaKnown RBP10.22□□□□□ -0.77
UBFD1-209ENST00000569919 ERICH6Q7L0X2 663 aa10.22□□□□□ -0.77
UBFD1-209ENST00000569919 TTC13Q8NBP0 860 aa10.22□□□□□ -0.77
UBFD1-209ENST00000569919 OTUD5Q96G74 571 aa10.22□□□□□ -0.77
UBFD1-209ENST00000569919 RBM27Q9P2N5 1060 aaKnown RBP10.22□□□□□ -0.77
UBFD1-209ENST00000569919 KIAA0556O60303 1618 aa10.22□□□□□ -0.77
UBFD1-209ENST00000569919 KIF21BO75037 1637 aa10.22□□□□□ -0.77
UBFD1-209ENST00000569919 PRSS12P56730 875 aa10.21□□□□□ -0.77
UBFD1-209ENST00000569919 LHX8Q68G74 356 aa10.21□□□□□ -0.77
UBFD1-209ENST00000569919 ADGRG1Q9Y653 693 aa10.21□□□□□ -0.77
UBFD1-209ENST00000569919 SOCS7O14512 581 aa10.2□□□□□ -0.78
UBFD1-209ENST00000569919 RAPGEF3O95398 923 aa10.2□□□□□ -0.78
UBFD1-209ENST00000569919 CLCN1P35523 988 aa10.2□□□□□ -0.78
UBFD1-209ENST00000569919 ADAMTSL3P82987 1691 aa10.2□□□□□ -0.78
UBFD1-209ENST00000569919 MDM2Q00987 491 aaPredicted RBP10.2□□□□□ -0.78
UBFD1-209ENST00000569919 GOLGA3Q08378 1498 aa10.2□□□□□ -0.78
UBFD1-209ENST00000569919 METTL3Q86U44 580 aaKnown RBP10.2□□□□□ -0.78
UBFD1-209ENST00000569919 CDCA7LQ96GN5 454 aa10.2□□□□□ -0.78
UBFD1-209ENST00000569919 TMUB1Q9BVT8 246 aa10.2□□□□□ -0.78
UBFD1-209ENST00000569919 BCL2L12Q9HB09 334 aa10.2□□□□□ -0.78
UBFD1-209ENST00000569919 MS4A1P11836 297 aa10.19□□□□□ -0.78
UBFD1-209ENST00000569919 COL9A1P20849 921 aa10.19□□□□□ -0.78
UBFD1-209ENST00000569919 GPCPD1Q9NPB8 672 aa10.19□□□□□ -0.78
UBFD1-209ENST00000569919 PXYLP1Q8TE99 480 aa10.18□□□□□ -0.78
UBFD1-209ENST00000569919 PCF11O94913 1555 aaKnown RBP10.18□□□□□ -0.78
UBFD1-209ENST00000569919 PTPREP23469 700 aa10.17□□□□□ -0.78
UBFD1-209ENST00000569919 NLRP7Q8WX94 980 aa10.17□□□□□ -0.78
UBFD1-209ENST00000569919 HSPA2P54652 639 aa10.16□□□□□ -0.78
UBFD1-209ENST00000569919 ILDR2Q71H61 639 aa10.16□□□□□ -0.78
UBFD1-209ENST00000569919 C14orf37Q86TY3 774 aa10.16□□□□□ -0.78
UBFD1-209ENST00000569919 ABCA8O94911 1581 aa10.16□□□□□ -0.78
UBFD1-209ENST00000569919 DISP3Q9P2K9 1392 aa10.15□□□□□ -0.78
UBFD1-209ENST00000569919 PPP1R3GB7ZBB8 358 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms