RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 RPGRIP1LQ68CZ1 1315 aa31.45■■■□□ 2.62
VCPKMT-205ENST00000569518 SPATA31D1Q6ZQQ2 1576 aa31.45■■■□□ 2.62
VCPKMT-205ENST00000569518 ADGRF5Q8IZF2 1346 aa31.44■■■□□ 2.62
VCPKMT-205ENST00000569518 TMEM131LA2VDJ0 1609 aa31.43■■■□□ 2.62
VCPKMT-205ENST00000569518 CHGAP10645 457 aaKnown RBP31.42■■■□□ 2.62
VCPKMT-205ENST00000569518 IDI1Q13907 227 aa31.42■■■□□ 2.62
VCPKMT-205ENST00000569518 NEXMIFQ5QGS0 1516 aa31.42■■■□□ 2.62
VCPKMT-205ENST00000569518 MLECQ14165 292 aa31.42■■■□□ 2.62
VCPKMT-205ENST00000569518 FBXO31Q5XUX0 539 aaPredicted RBP31.41■■■□□ 2.62
VCPKMT-205ENST00000569518 MYO5BQ9ULV0 1848 aa31.39■■■□□ 2.62
VCPKMT-205ENST00000569518 PIK3C2GO75747 1445 aa31.39■■■□□ 2.61
VCPKMT-205ENST00000569518 SCAF11Q99590 1463 aaKnown RBP31.38■■■□□ 2.61
VCPKMT-205ENST00000569518 ANP32CO43423 234 aa31.35■■■□□ 2.61
VCPKMT-205ENST00000569518 SETBP1Q9Y6X0 1596 aa31.34■■■□□ 2.61
VCPKMT-205ENST00000569518 TESK2Q96S53 571 aa31.34■■■□□ 2.61
VCPKMT-205ENST00000569518 ZMYM3Q14202 1370 aa31.32■■■□□ 2.6
VCPKMT-205ENST00000569518 CFAP70Q5T0N1 1121 aa31.31■■■□□ 2.6
VCPKMT-205ENST00000569518 ZFYVE9O95405 1425 aa31.31■■■□□ 2.6
VCPKMT-205ENST00000569518 ESF1Q9H501 851 aaKnown RBP31.27■■■□□ 2.6
VCPKMT-205ENST00000569518 ADGRB1O14514 1584 aa31.26■■■□□ 2.6
VCPKMT-205ENST00000569518 CCER2I3L3R5 266 aa31.26■■■□□ 2.59
VCPKMT-205ENST00000569518 C14orf93Q9H972 538 aaKnown RBP31.25■■■□□ 2.59
VCPKMT-205ENST00000569518 VGFO15240 615 aaPredicted RBP31.24■■■□□ 2.59
VCPKMT-205ENST00000569518 DISP3Q9P2K9 1392 aa31.24■■■□□ 2.59
VCPKMT-205ENST00000569518 EIF3AQ14152 1382 aaKnown RBP31.23■■■□□ 2.59
VCPKMT-205ENST00000569518 MYO3AQ8NEV4 1616 aa31.22■■■□□ 2.59
VCPKMT-205ENST00000569518 A2ML1A8K2U0 1454 aa31.22■■■□□ 2.59
VCPKMT-205ENST00000569518 YTHDC1Q96MU7 727 aaKnown RBP31.19■■■□□ 2.58
VCPKMT-205ENST00000569518 POLR3GLQ9BT43 218 aa31.19■■■□□ 2.58
VCPKMT-205ENST00000569518 TMF1P82094 1093 aa31.16■■■□□ 2.58
VCPKMT-205ENST00000569518 FER1L4A9Z1Z3 1794 aa31.15■■■□□ 2.58
VCPKMT-205ENST00000569518 KDM5AP29375 1690 aaKnown RBP31.15■■■□□ 2.58
VCPKMT-205ENST00000569518 NUTM2DQ5VT03 806 aaPredicted RBP31.14■■■□□ 2.58
VCPKMT-205ENST00000569518 TNRQ92752 1358 aa31.14■■■□□ 2.58
VCPKMT-205ENST00000569518 PRKRIP1Q9H875 184 aaPredicted RBP31.12■■■□□ 2.57
VCPKMT-205ENST00000569518 CENPBP07199 599 aaPredicted RBP31.11■■■□□ 2.57
VCPKMT-205ENST00000569518 C3P01024 1663 aa31.1■■■□□ 2.57
VCPKMT-205ENST00000569518 STAG3Q9UJ98 1225 aa31.1■■■□□ 2.57
VCPKMT-205ENST00000569518 ASXL1Q8IXJ9 1541 aa31.1■■■□□ 2.57
VCPKMT-205ENST00000569518 SBNO2Q9Y2G9 1366 aa31.1■■■□□ 2.57
VCPKMT-205ENST00000569518 RIMS2Q9UQ26 1411 aa31.07■■■□□ 2.56
VCPKMT-205ENST00000569518 UBR1Q8IWV7 1749 aa31.06■■■□□ 2.56
VCPKMT-205ENST00000569518 ARHGEF28Q8N1W1 1705 aaKnown RBP31.05■■■□□ 2.56
VCPKMT-205ENST00000569518 TMEM132EQ6IEE7 984 aa31.05■■■□□ 2.56
VCPKMT-205ENST00000569518 QRICH2Q9H0J4 1663 aa31.03■■■□□ 2.56
VCPKMT-205ENST00000569518 SLC24A1O60721 1099 aa31.03■■■□□ 2.56
VCPKMT-205ENST00000569518 ALKQ9UM73 1620 aa31.03■■■□□ 2.56
VCPKMT-205ENST00000569518 NLRP1Q9C000 1473 aa31.02■■■□□ 2.56
VCPKMT-205ENST00000569518 CDCA8Q53HL2 280 aa31.01■■■□□ 2.56
VCPKMT-205ENST00000569518 CENPJQ9HC77 1338 aaPredicted RBP31■■■□□ 2.55
VCPKMT-205ENST00000569518 MYOM1P52179 1685 aa31■■■□□ 2.55
VCPKMT-205ENST00000569518 SETD1AO15047 1707 aaKnown RBP30.99■■■□□ 2.55
VCPKMT-205ENST00000569518 TRAK1Q9UPV9 953 aa30.99■■■□□ 2.55
VCPKMT-205ENST00000569518 CEBPAP49715 358 aaPredicted RBP30.96■■■□□ 2.55
VCPKMT-205ENST00000569518 NRXN3Q9Y4C0 1643 aa30.96■■■□□ 2.55
VCPKMT-205ENST00000569518 PER1O15534 1290 aaPredicted RBP30.95■■■□□ 2.55
VCPKMT-205ENST00000569518 PTPRMP28827 1452 aa30.93■■■□□ 2.54
VCPKMT-205ENST00000569518 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.93■■■□□ 2.54
VCPKMT-205ENST00000569518 TMEM2Q9UHN6 1383 aa30.91■■■□□ 2.54
VCPKMT-205ENST00000569518 YTHDC2Q9H6S0 1430 aaKnown RBP30.91■■■□□ 2.54
VCPKMT-205ENST00000569518 KTN1Q86UP2 1357 aaKnown RBP30.91■■■□□ 2.54
VCPKMT-205ENST00000569518 PANK3Q9H999 370 aa30.89■■■□□ 2.54
VCPKMT-205ENST00000569518 ADAMTSL3P82987 1691 aa30.89■■■□□ 2.53
VCPKMT-205ENST00000569518 CCDC184Q52MB2 194 aa30.88■■■□□ 2.53
VCPKMT-205ENST00000569518 RIMS1Q86UR5 1692 aaKnown RBP30.88■■■□□ 2.53
VCPKMT-205ENST00000569518 SENP3Q9H4L4 574 aaPredicted RBP30.85■■■□□ 2.53
VCPKMT-205ENST00000569518 HDGFP51858 240 aaKnown RBP30.84■■■□□ 2.53
VCPKMT-205ENST00000569518 TULP4Q9NRJ4 1543 aa30.83■■■□□ 2.53
VCPKMT-205ENST00000569518 PARD3Q8TEW0 1356 aa30.83■■■□□ 2.53
VCPKMT-205ENST00000569518 DLC1Q96QB1 1528 aa30.83■■■□□ 2.53
VCPKMT-205ENST00000569518 SLIT1O75093 1534 aa30.82■■■□□ 2.52
VCPKMT-205ENST00000569518 RALBP1Q15311 655 aa30.82■■■□□ 2.52
VCPKMT-205ENST00000569518 ARHGAP23Q9P227 1491 aa30.81■■■□□ 2.52
VCPKMT-205ENST00000569518 LRPPRCP42704 1394 aaKnown RBP30.8■■■□□ 2.52
VCPKMT-205ENST00000569518 STK26Q9P289 416 aa30.8■■■□□ 2.52
VCPKMT-205ENST00000569518 MRS2Q9HD23 443 aa30.79■■■□□ 2.52
VCPKMT-205ENST00000569518 PUS7Q96PZ0 661 aaKnown RBP30.76■■■□□ 2.51
VCPKMT-205ENST00000569518 CNGB1Q14028 1251 aaPredicted RBP30.75■■■□□ 2.51
VCPKMT-205ENST00000569518 MYBBP1AQ9BQG0 1328 aaKnown RBP30.75■■■□□ 2.51
VCPKMT-205ENST00000569518 ABCC11Q96J66 1382 aa30.75■■■□□ 2.51
VCPKMT-205ENST00000569518 PLEKHG1Q9ULL1 1385 aa30.75■■■□□ 2.51
VCPKMT-205ENST00000569518 KNDC1Q76NI1 1749 aa30.74■■■□□ 2.51
VCPKMT-205ENST00000569518 METP08581 1390 aa30.74■■■□□ 2.51
VCPKMT-205ENST00000569518 EVC2Q86UK5 1308 aa30.74■■■□□ 2.51
VCPKMT-205ENST00000569518 ADAMTS13Q76LX8 1427 aa30.73■■■□□ 2.51
VCPKMT-205ENST00000569518 PRAM1Q96QH2 718 aa30.73■■■□□ 2.51
VCPKMT-205ENST00000569518 CEP170BQ9Y4F5 1589 aaPredicted RBP30.72■■■□□ 2.51
VCPKMT-205ENST00000569518 LTKP29376 864 aa30.72■■■□□ 2.51
VCPKMT-205ENST00000569518 PLPPR3Q6T4P5 718 aa30.72■■■□□ 2.51
VCPKMT-205ENST00000569518 NPC1L1Q9UHC9 1359 aa30.7■■■□□ 2.51
VCPKMT-205ENST00000569518 BRD4O60885 1362 aaPredicted RBP30.69■■■□□ 2.5
VCPKMT-205ENST00000569518 TECPR2O15040 1411 aa30.69■■■□□ 2.5
VCPKMT-205ENST00000569518 AMER1Q5JTC6 1135 aaPredicted RBP30.69■■■□□ 2.5
VCPKMT-205ENST00000569518 KNSTRNQ9Y448 316 aa30.69■■■□□ 2.5
VCPKMT-205ENST00000569518 MED14O60244 1454 aa30.69■■■□□ 2.5
VCPKMT-205ENST00000569518 ZNF142P52746 1687 aaPredicted RBP30.68■■■□□ 2.5
VCPKMT-205ENST00000569518 SAFB2Q14151 953 aaKnown RBP eCLIP30.67■■■□□ 2.5
VCPKMT-205ENST00000569518 CPS1P31327 1500 aa30.67■■■□□ 2.5
VCPKMT-205ENST00000569518 CC2D1BQ5T0F9 858 aaKnown RBP30.66■■■□□ 2.5
VCPKMT-205ENST00000569518 POGKQ9P215 609 aa30.66■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms