RNA–Protein interactions for RNA: ENST00000569357.4

TCF4-243, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-243ENST00000569357 LRP6O75581 1613 aa14.59□□□□□ -0.07
TCF4-243ENST00000569357 CEP162Q5TB80 1403 aa14.59□□□□□ -0.07
TCF4-243ENST00000569357 NUTM2BA6NNL0 878 aaPredicted RBP14.59□□□□□ -0.07
TCF4-243ENST00000569357 NUTM2EB1AL46 878 aaPredicted RBP14.59□□□□□ -0.07
TCF4-243ENST00000569357 APLP2Q06481 763 aa14.59□□□□□ -0.07
TCF4-243ENST00000569357 NUTM2AQ8IVF1 878 aaPredicted RBP14.59□□□□□ -0.07
TCF4-243ENST00000569357 C14orf37Q86TY3 774 aa14.58□□□□□ -0.08
TCF4-243ENST00000569357 KCNA4P22459 653 aa14.57□□□□□ -0.08
TCF4-243ENST00000569357 PRDM15P57071 1507 aaPredicted RBP14.56□□□□□ -0.08
TCF4-243ENST00000569357 CEP152O94986 1710 aa14.55□□□□□ -0.08
TCF4-243ENST00000569357 NUTM2DQ5VT03 806 aaPredicted RBP14.55□□□□□ -0.08
TCF4-243ENST00000569357 PIK3C2BO00750 1634 aa14.53□□□□□ -0.08
TCF4-243ENST00000569357 NKTRP30414 1462 aaKnown RBP14.53□□□□□ -0.08
TCF4-243ENST00000569357 FGD6Q6ZV73 1430 aa14.53□□□□□ -0.08
TCF4-243ENST00000569357 IDI1Q13907 227 aa14.53□□□□□ -0.08
TCF4-243ENST00000569357 COL16A1Q07092 1604 aaPredicted RBP14.52□□□□□ -0.08
TCF4-243ENST00000569357 ARHGEF5Q12774 1597 aa14.52□□□□□ -0.08
TCF4-243ENST00000569357 AFF2P51816 1311 aa14.52□□□□□ -0.08
TCF4-243ENST00000569357 MROH1Q8NDA8 1641 aa14.52□□□□□ -0.09
TCF4-243ENST00000569357 EFCAB6Q5THR3 1501 aa14.51□□□□□ -0.09
TCF4-243ENST00000569357 EIF2AK4Q9P2K8 1649 aaKnown RBP14.5□□□□□ -0.09
TCF4-243ENST00000569357 ARHGAP31Q2M1Z3 1444 aa14.49□□□□□ -0.09
TCF4-243ENST00000569357 ATF3P18847 181 aa14.49□□□□□ -0.09
TCF4-243ENST00000569357 ZRANB1Q9UGI0 708 aa14.49□□□□□ -0.09
TCF4-243ENST00000569357 CDK12Q9NYV4 1490 aaPredicted RBP14.49□□□□□ -0.09
TCF4-243ENST00000569357 TET3O43151 1660 aa14.49□□□□□ -0.09
TCF4-243ENST00000569357 PPP1R15AO75807 674 aaPredicted RBP14.48□□□□□ -0.09
TCF4-243ENST00000569357 QTRT2Q9H974 415 aaKnown RBP14.48□□□□□ -0.09
TCF4-243ENST00000569357 C8orf37Q96NL8 207 aa14.47□□□□□ -0.09
TCF4-243ENST00000569357 RRP7BPQ9NSQ0 103 aa14.47□□□□□ -0.09
TCF4-243ENST00000569357 NWD1Q149M9 1564 aa14.47□□□□□ -0.09
TCF4-243ENST00000569357 KANK1Q14678 1352 aa14.47□□□□□ -0.09
TCF4-243ENST00000569357 RBM6P78332 1123 aaKnown RBP14.46□□□□□ -0.09
TCF4-243ENST00000569357 CADPS2Q86UW7 1296 aa14.46□□□□□ -0.09
TCF4-243ENST00000569357 RGS12O14924 1447 aa14.46□□□□□ -0.09
TCF4-243ENST00000569357 CHRDL2Q6WN34 429 aa14.45□□□□□ -0.1
TCF4-243ENST00000569357 RBM42Q9BTD8 480 aaKnown RBP14.45□□□□□ -0.1
TCF4-243ENST00000569357 MAST1Q9Y2H9 1570 aa14.45□□□□□ -0.1
TCF4-243ENST00000569357 DUOX2Q9NRD8 1548 aa14.45□□□□□ -0.1
TCF4-243ENST00000569357 C19orf44Q9H6X5 657 aa14.44□□□□□ -0.1
TCF4-243ENST00000569357 KDM5AP29375 1690 aaKnown RBP14.43□□□□□ -0.1
TCF4-243ENST00000569357 KIF15Q9NS87 1388 aa14.43□□□□□ -0.1
TCF4-243ENST00000569357 SHPRHQ149N8 1683 aa14.42□□□□□ -0.1
TCF4-243ENST00000569357 HDGFP51858 240 aaKnown RBP14.42□□□□□ -0.1
TCF4-243ENST00000569357 SAMD1Q6SPF0 538 aaPredicted RBP14.42□□□□□ -0.1
TCF4-243ENST00000569357 BRINP3Q76B58 766 aa14.42□□□□□ -0.1
TCF4-243ENST00000569357 AHDC1Q5TGY3 1603 aaPredicted RBP14.41□□□□□ -0.1
TCF4-243ENST00000569357 NGLY1Q96IV0 654 aa14.41□□□□□ -0.1
TCF4-243ENST00000569357 ATAD2Q6PL18 1390 aa14.41□□□□□ -0.1
TCF4-243ENST00000569357 SLC52A1Q9NWF4 448 aa14.4□□□□□ -0.1
TCF4-243ENST00000569357 PLEKHG1Q9ULL1 1385 aa14.39□□□□□ -0.11
TCF4-243ENST00000569357 ADAMTS2O95450 1211 aa14.39□□□□□ -0.11
TCF4-243ENST00000569357 CHGAP10645 457 aaKnown RBP14.39□□□□□ -0.11
TCF4-243ENST00000569357 TBX22Q9Y458 520 aa14.39□□□□□ -0.11
TCF4-243ENST00000569357 ADGRB3O60242 1522 aa14.39□□□□□ -0.11
TCF4-243ENST00000569357 ERBINQ96RT1 1412 aa14.39□□□□□ -0.11
TCF4-243ENST00000569357 NCOA3Q9Y6Q9 1424 aa14.39□□□□□ -0.11
TCF4-243ENST00000569357 LRRC59Q96AG4 307 aaKnown RBP14.38□□□□□ -0.11
TCF4-243ENST00000569357 MYOM3Q5VTT5 1437 aa14.37□□□□□ -0.11
TCF4-243ENST00000569357 RIMS2Q9UQ26 1411 aa14.37□□□□□ -0.11
TCF4-243ENST00000569357 SETBP1Q9Y6X0 1596 aa14.37□□□□□ -0.11
TCF4-243ENST00000569357 CHD2O14647 1828 aaKnown RBP14.36□□□□□ -0.11
TCF4-243ENST00000569357 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.35□□□□□ -0.11
TCF4-243ENST00000569357 DIP2AQ14689 1571 aa14.35□□□□□ -0.11
TCF4-243ENST00000569357 NOS1P29475 1434 aa14.35□□□□□ -0.11
TCF4-243ENST00000569357 DDX17Q92841 729 aaKnown RBP14.35□□□□□ -0.11
TCF4-243ENST00000569357 USP21Q9UK80 565 aa14.34□□□□□ -0.11
TCF4-243ENST00000569357 CHIC2Q9UKJ5 165 aa14.34□□□□□ -0.11
TCF4-243ENST00000569357 AMOTL2Q9Y2J4 779 aa14.34□□□□□ -0.11
TCF4-243ENST00000569357 SRCAPQ6ZRS2 3230 aa14.34□□□□□ -0.11
TCF4-243ENST00000569357 ZFYVE9O95405 1425 aa14.33□□□□□ -0.11
TCF4-243ENST00000569357 SETD5Q9C0A6 1442 aa14.33□□□□□ -0.11
TCF4-243ENST00000569357 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.33□□□□□ -0.12
TCF4-243ENST00000569357 KANK4Q5T7N3 995 aaPredicted RBP14.32□□□□□ -0.12
TCF4-243ENST00000569357 PNPLA6Q8IY17 1366 aa14.32□□□□□ -0.12
TCF4-243ENST00000569357 ASXL1Q8IXJ9 1541 aa14.31□□□□□ -0.12
TCF4-243ENST00000569357 POLA2Q14181 598 aa14.31□□□□□ -0.12
TCF4-243ENST00000569357 TRPC5Q9UL62 973 aaPredicted RBP14.31□□□□□ -0.12
TCF4-243ENST00000569357 ABCC5O15440 1437 aa14.31□□□□□ -0.12
TCF4-243ENST00000569357 LMTK2Q8IWU2 1503 aa14.31□□□□□ -0.12
TCF4-243ENST00000569357 CCDC125Q86Z20 511 aa14.29□□□□□ -0.12
TCF4-243ENST00000569357 ADAMTS13Q76LX8 1427 aa14.29□□□□□ -0.12
TCF4-243ENST00000569357 MST1RQ04912 1400 aa14.27□□□□□ -0.12
TCF4-243ENST00000569357 PIK3R4Q99570 1358 aa14.27□□□□□ -0.12
TCF4-243ENST00000569357 ANKRD30AQ9BXX3 1397 aa14.27□□□□□ -0.12
TCF4-243ENST00000569357 DCCP43146 1447 aa14.25□□□□□ -0.13
TCF4-243ENST00000569357 DAPK1P53355 1430 aa14.25□□□□□ -0.13
TCF4-243ENST00000569357 PTPRUQ92729 1446 aa14.25□□□□□ -0.13
TCF4-243ENST00000569357 MYO5BQ9ULV0 1848 aa14.25□□□□□ -0.13
TCF4-243ENST00000569357 GCC2Q8IWJ2 1684 aa14.24□□□□□ -0.13
TCF4-243ENST00000569357 NHSL1Q5SYE7 1610 aa14.23□□□□□ -0.13
TCF4-243ENST00000569357 TRPM2O94759 1503 aa14.23□□□□□ -0.13
TCF4-243ENST00000569357 TMEM131LA2VDJ0 1609 aa14.23□□□□□ -0.13
TCF4-243ENST00000569357 DEFB132Q7Z7B7 95 aa14.22□□□□□ -0.13
TCF4-243ENST00000569357 FNBP4Q8N3X1 1017 aaPredicted RBP14.22□□□□□ -0.13
TCF4-243ENST00000569357 RPRD2Q5VT52 1461 aaKnown RBP14.22□□□□□ -0.13
TCF4-243ENST00000569357 CROCC2H7BZ55 1655 aa14.22□□□□□ -0.13
TCF4-243ENST00000569357 SF3B2Q13435 895 aaKnown RBP14.21□□□□□ -0.13
TCF4-243ENST00000569357 SP7Q8TDD2 431 aaPredicted RBP14.21□□□□□ -0.13
TCF4-243ENST00000569357 ATRNO75882 1429 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms