RNA–Protein interactions for RNA: ENST00000569298.1

KARS-211, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-211ENST00000569298 BCL2L12Q9HB09 334 aa8.56□□□□□ -1.04
KARS-211ENST00000569298 CCER2I3L3R5 266 aa8.55□□□□□ -1.04
KARS-211ENST00000569298 DMRTA1Q5VZB9 504 aa8.55□□□□□ -1.04
KARS-211ENST00000569298 ADGRD1Q6QNK2 874 aa8.55□□□□□ -1.04
KARS-211ENST00000569298 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.55□□□□□ -1.04
KARS-211ENST00000569298 TERF1P54274 439 aa8.54□□□□□ -1.04
KARS-211ENST00000569298 MTERF4Q7Z6M4 381 aaKnown RBP8.54□□□□□ -1.04
KARS-211ENST00000569298 ZDHHC16Q969W1 377 aa8.53□□□□□ -1.04
KARS-211ENST00000569298 KCNH8Q96L42 1107 aa8.53□□□□□ -1.04
KARS-211ENST00000569298 KCNK17Q96T54 332 aa8.53□□□□□ -1.04
KARS-211ENST00000569298 EEA1Q15075 1411 aa8.53□□□□□ -1.04
KARS-211ENST00000569298 DPYSL4O14531 572 aa8.52□□□□□ -1.05
KARS-211ENST00000569298 CLGNO14967 610 aa8.52□□□□□ -1.05
KARS-211ENST00000569298 PTMSP20962 102 aa8.52□□□□□ -1.05
KARS-211ENST00000569298 MMP14P50281 582 aa8.52□□□□□ -1.05
KARS-211ENST00000569298 PNNQ9H307 717 aaKnown RBP8.52□□□□□ -1.05
KARS-211ENST00000569298 CHMP4BQ9H444 224 aaKnown RBP8.52□□□□□ -1.05
KARS-211ENST00000569298 WRNQ14191 1432 aaPredicted RBP eCLIP8.52□□□□□ -1.05
KARS-211ENST00000569298 HRO43593 1189 aa8.51□□□□□ -1.05
KARS-211ENST00000569298 PTPREP23469 700 aa8.51□□□□□ -1.05
KARS-211ENST00000569298 PCDHGA10Q9Y5H3 936 aa8.51□□□□□ -1.05
KARS-211ENST00000569298 PHF14O94880 888 aa8.5□□□□□ -1.05
KARS-211ENST00000569298 AXDND1Q5T1B0 1012 aaPredicted RBP8.5□□□□□ -1.05
KARS-211ENST00000569298 SLC4A5Q9BY07 1137 aa8.5□□□□□ -1.05
KARS-211ENST00000569298 ADAM33Q9BZ11 813 aa8.5□□□□□ -1.05
KARS-211ENST00000569298 SEMA3EO15041 775 aa8.49□□□□□ -1.05
KARS-211ENST00000569298 KIF20AO95235 890 aa8.49□□□□□ -1.05
KARS-211ENST00000569298 PTMAP06454 111 aaKnown RBP8.49□□□□□ -1.05
KARS-211ENST00000569298 L1TD1Q5T7N2 865 aaKnown RBP8.49□□□□□ -1.05
KARS-211ENST00000569298 ARIH1Q9Y4X5 557 aaPredicted RBP8.49□□□□□ -1.05
KARS-211ENST00000569298 ITGAEP38570 1179 aa8.48□□□□□ -1.05
KARS-211ENST00000569298 SECISBP2LQ93073 1101 aaKnown RBP8.48□□□□□ -1.05
KARS-211ENST00000569298 FBXW7Q969H0 707 aa8.48□□□□□ -1.05
KARS-211ENST00000569298 VPS9D1Q9Y2B5 631 aa8.48□□□□□ -1.05
KARS-211ENST00000569298 ZCCHC6Q5VYS8 1495 aaKnown RBP8.48□□□□□ -1.05
KARS-211ENST00000569298 SHROOM4Q9ULL8 1493 aa8.47□□□□□ -1.05
KARS-211ENST00000569298 TNNT2P45379 298 aaPredicted RBP8.47□□□□□ -1.05
KARS-211ENST00000569298 RGS3P49796 1198 aa8.47□□□□□ -1.05
KARS-211ENST00000569298 SLC20A2Q08357 652 aa8.47□□□□□ -1.05
KARS-211ENST00000569298 PDIA6Q15084 440 aa8.47□□□□□ -1.05
KARS-211ENST00000569298 TYW1BQ6NUM6 668 aa8.47□□□□□ -1.05
KARS-211ENST00000569298 TESPA1A2RU30 521 aaPredicted RBP8.46□□□□□ -1.06
KARS-211ENST00000569298 GOLGA6L3A6NEY3 463 aa8.46□□□□□ -1.06
KARS-211ENST00000569298 SPDYE16A6NNV3 312 aaPredicted RBP8.46□□□□□ -1.06
KARS-211ENST00000569298 GRIPAP1Q4V328 841 aa8.46□□□□□ -1.06
KARS-211ENST00000569298 SMYD5Q6GMV2 418 aa8.46□□□□□ -1.06
KARS-211ENST00000569298 TICAM2Q86XR7 235 aa8.46□□□□□ -1.06
KARS-211ENST00000569298 EPAS1Q99814 870 aa8.46□□□□□ -1.06
KARS-211ENST00000569298 ZBED2Q9BTP6 218 aa8.46□□□□□ -1.06
KARS-211ENST00000569298 BICRAQ9NZM4 1560 aa8.45□□□□□ -1.06
KARS-211ENST00000569298 MCCP23508 829 aa8.45□□□□□ -1.06
KARS-211ENST00000569298 ZNF622Q969S3 477 aaKnown RBP eCLIP8.45□□□□□ -1.06
KARS-211ENST00000569298 TRIM44Q96DX7 344 aaPredicted RBP8.45□□□□□ -1.06
KARS-211ENST00000569298 DDRGK1Q96HY6 314 aa8.45□□□□□ -1.06
KARS-211ENST00000569298 TMEM51Q9NW97 253 aa8.45□□□□□ -1.06
KARS-211ENST00000569298 LAS1LQ9Y4W2 734 aaKnown RBP8.45□□□□□ -1.06
KARS-211ENST00000569298 UNC13AQ9UPW8 1703 aa8.45□□□□□ -1.06
KARS-211ENST00000569298 RGS22Q8NE09 1264 aa8.44□□□□□ -1.06
KARS-211ENST00000569298 PPP1R3GB7ZBB8 358 aa8.43□□□□□ -1.06
KARS-211ENST00000569298 BHMG1C9JSJ3 638 aaPredicted RBP8.43□□□□□ -1.06
KARS-211ENST00000569298 ZC3H15Q8WU90 426 aaKnown RBP8.43□□□□□ -1.06
KARS-211ENST00000569298 GTPBP4Q9BZE4 634 aaKnown RBP8.43□□□□□ -1.06
KARS-211ENST00000569298 CLSTN1O94985 981 aa8.42□□□□□ -1.06
KARS-211ENST00000569298 DDX12PQ92771 950 aa8.42□□□□□ -1.06
KARS-211ENST00000569298 RRAGDQ9NQL2 400 aaPredicted RBP8.42□□□□□ -1.06
KARS-211ENST00000569298 DMTNQ08495 405 aa8.41□□□□□ -1.06
KARS-211ENST00000569298 FRAT1Q92837 279 aaPredicted RBP8.41□□□□□ -1.06
KARS-211ENST00000569298 CCDC9Q9Y3X0 531 aaKnown RBP8.41□□□□□ -1.06
KARS-211ENST00000569298 LETM1O95202 739 aaPredicted RBP8.4□□□□□ -1.06
KARS-211ENST00000569298 COL9A1P20849 921 aa8.4□□□□□ -1.06
KARS-211ENST00000569298 IRX3P78415 501 aaPredicted RBP8.4□□□□□ -1.06
KARS-211ENST00000569298 TMEM132AQ24JP5 1023 aa8.4□□□□□ -1.06
KARS-211ENST00000569298 C6orf132Q5T0Z8 1188 aa8.4□□□□□ -1.06
KARS-211ENST00000569298 CEP120Q8N960 986 aa8.4□□□□□ -1.06
KARS-211ENST00000569298 YY1AP1Q9H869 796 aa8.39□□□□□ -1.07
KARS-211ENST00000569298 HCSTQ9UBK5 93 aa8.39□□□□□ -1.07
KARS-211ENST00000569298 SETQ01105 290 aaPredicted RBP8.38□□□□□ -1.07
KARS-211ENST00000569298 EN1Q05925 392 aaPredicted RBP8.38□□□□□ -1.07
KARS-211ENST00000569298 MS4A1P11836 297 aa8.37□□□□□ -1.07
KARS-211ENST00000569298 ZNF830Q96NB3 372 aaPredicted RBP8.37□□□□□ -1.07
KARS-211ENST00000569298 ISY1Q9ULR0 285 aaKnown RBP8.37□□□□□ -1.07
KARS-211ENST00000569298 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.37□□□□□ -1.07
KARS-211ENST00000569298 NCAPD3P42695 1498 aa8.37□□□□□ -1.07
KARS-211ENST00000569298 SCRIBQ14160 1630 aa8.36□□□□□ -1.07
KARS-211ENST00000569298 ONECUT3O60422 494 aaPredicted RBP8.36□□□□□ -1.07
KARS-211ENST00000569298 NFKBIBQ15653 356 aa8.36□□□□□ -1.07
KARS-211ENST00000569298 PROX2Q3B8N5 592 aa8.36□□□□□ -1.07
KARS-211ENST00000569298 RBM33Q96EV2 1170 aaKnown RBP8.36□□□□□ -1.07
KARS-211ENST00000569298 NBPF3Q9H094 633 aa8.36□□□□□ -1.07
KARS-211ENST00000569298 RABGEF1Q9UJ41 708 aa8.36□□□□□ -1.07
KARS-211ENST00000569298 MRPL50Q8N5N7 158 aaKnown RBP8.35□□□□□ -1.07
KARS-211ENST00000569298 DCAF11Q8TEB1 546 aa8.35□□□□□ -1.07
KARS-211ENST00000569298 KCTD12Q96CX2 325 aaKnown RBP8.35□□□□□ -1.07
KARS-211ENST00000569298 SLC24A3Q9HC58 644 aa8.35□□□□□ -1.07
KARS-211ENST00000569298 TCERG1O14776 1098 aaKnown RBP8.34□□□□□ -1.07
KARS-211ENST00000569298 PUS7Q96PZ0 661 aaKnown RBP8.34□□□□□ -1.07
KARS-211ENST00000569298 MAP3K7O43318 606 aa8.33□□□□□ -1.08
KARS-211ENST00000569298 FAM193AP78312 1265 aa8.33□□□□□ -1.08
KARS-211ENST00000569298 NEUROD2Q15784 382 aa8.33□□□□□ -1.08
KARS-211ENST00000569298 CNPY4Q8N129 248 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms