RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 FGD6Q6ZV73 1430 aa14.05□□□□□ -0.16
CAPN3-219ENST00000569136 CNTLNQ9NXG0 1405 aa14.05□□□□□ -0.16
CAPN3-219ENST00000569136 REREQ9P2R6 1566 aa14.05□□□□□ -0.16
CAPN3-219ENST00000569136 ITSN2Q9NZM3 1697 aa14.04□□□□□ -0.16
CAPN3-219ENST00000569136 CEBPAP49715 358 aaPredicted RBP14.04□□□□□ -0.16
CAPN3-219ENST00000569136 NKX1-1Q15270 411 aaPredicted RBP14.04□□□□□ -0.16
CAPN3-219ENST00000569136 ADAMTSL3P82987 1691 aa14.04□□□□□ -0.16
CAPN3-219ENST00000569136 SPRYD3Q8NCJ5 442 aa14.03□□□□□ -0.16
CAPN3-219ENST00000569136 ATP7AQ04656 1500 aa14.03□□□□□ -0.16
CAPN3-219ENST00000569136 DIP2CQ9Y2E4 1556 aa14.03□□□□□ -0.16
CAPN3-219ENST00000569136 ASTLQ6HA08 431 aaPredicted RBP14.02□□□□□ -0.17
CAPN3-219ENST00000569136 RRP7BPQ9NSQ0 103 aa14.02□□□□□ -0.17
CAPN3-219ENST00000569136 BCORL1Q5H9F3 1711 aa14.01□□□□□ -0.17
CAPN3-219ENST00000569136 ARHGEF5Q12774 1597 aa14.01□□□□□ -0.17
CAPN3-219ENST00000569136 ABCC5O15440 1437 aa14.01□□□□□ -0.17
CAPN3-219ENST00000569136 ZMYM3Q14202 1370 aa14.01□□□□□ -0.17
CAPN3-219ENST00000569136 PPARGC1BQ86YN6 1023 aaKnown RBP14.01□□□□□ -0.17
CAPN3-219ENST00000569136 WASHC2CQ9Y4E1 1318 aa14□□□□□ -0.17
CAPN3-219ENST00000569136 CHIC2Q9UKJ5 165 aa14□□□□□ -0.17
CAPN3-219ENST00000569136 KIDINS220Q9ULH0 1771 aa14□□□□□ -0.17
CAPN3-219ENST00000569136 ANKRD30AQ9BXX3 1397 aa13.99□□□□□ -0.17
CAPN3-219ENST00000569136 PLCB2Q00722 1185 aa13.99□□□□□ -0.17
CAPN3-219ENST00000569136 TCOF1Q13428 1488 aaKnown RBP13.99□□□□□ -0.17
CAPN3-219ENST00000569136 ABCA6Q8N139 1617 aa13.97□□□□□ -0.17
CAPN3-219ENST00000569136 SOX12O15370 315 aa13.97□□□□□ -0.17
CAPN3-219ENST00000569136 PHF8Q9UPP1 1060 aa13.97□□□□□ -0.17
CAPN3-219ENST00000569136 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.96□□□□□ -0.17
CAPN3-219ENST00000569136 RYDENQ9NUL5 291 aaKnown RBP13.96□□□□□ -0.17
CAPN3-219ENST00000569136 DAPK1P53355 1430 aa13.96□□□□□ -0.18
CAPN3-219ENST00000569136 INO80Q9ULG1 1556 aaPredicted RBP13.96□□□□□ -0.18
CAPN3-219ENST00000569136 KIF15Q9NS87 1388 aa13.96□□□□□ -0.18
CAPN3-219ENST00000569136 MADDQ8WXG6 1647 aa13.95□□□□□ -0.18
CAPN3-219ENST00000569136 NLRP6P59044 892 aa13.95□□□□□ -0.18
CAPN3-219ENST00000569136 MFRPQ9BY79 579 aa13.95□□□□□ -0.18
CAPN3-219ENST00000569136 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.95□□□□□ -0.18
CAPN3-219ENST00000569136 NCOA1Q15788 1441 aa13.94□□□□□ -0.18
CAPN3-219ENST00000569136 SHANK2Q9UPX8 1470 aa13.93□□□□□ -0.18
CAPN3-219ENST00000569136 PELP1Q8IZL8 1130 aaKnown RBP13.93□□□□□ -0.18
CAPN3-219ENST00000569136 PTPN23Q9H3S7 1636 aa13.93□□□□□ -0.18
CAPN3-219ENST00000569136 NPATQ14207 1427 aa13.92□□□□□ -0.18
CAPN3-219ENST00000569136 GTPBP6O43824 516 aaPredicted RBP13.92□□□□□ -0.18
CAPN3-219ENST00000569136 POTEIP0CG38 1075 aa13.92□□□□□ -0.18
CAPN3-219ENST00000569136 PLXNC1O60486 1568 aa13.92□□□□□ -0.18
CAPN3-219ENST00000569136 HAP1P54257 671 aaPredicted RBP13.91□□□□□ -0.18
CAPN3-219ENST00000569136 MAST1Q9Y2H9 1570 aa13.91□□□□□ -0.18
CAPN3-219ENST00000569136 HSPA2P54652 639 aa13.9□□□□□ -0.18
CAPN3-219ENST00000569136 SIGLEC1Q9BZZ2 1709 aa13.9□□□□□ -0.18
CAPN3-219ENST00000569136 DUOX2Q9NRD8 1548 aa13.9□□□□□ -0.19
CAPN3-219ENST00000569136 SETD1BQ9UPS6 1966 aaKnown RBP13.89□□□□□ -0.19
CAPN3-219ENST00000569136 ROCK1Q13464 1354 aa13.89□□□□□ -0.19
CAPN3-219ENST00000569136 KANK1Q14678 1352 aa13.89□□□□□ -0.19
CAPN3-219ENST00000569136 SEC24BO95487 1268 aa13.89□□□□□ -0.19
CAPN3-219ENST00000569136 ITGAEP38570 1179 aa13.89□□□□□ -0.19
CAPN3-219ENST00000569136 SLC39A7Q92504 469 aa13.89□□□□□ -0.19
CAPN3-219ENST00000569136 UHRF1BP1Q6BDS2 1440 aa13.89□□□□□ -0.19
CAPN3-219ENST00000569136 ERBINQ96RT1 1412 aa13.89□□□□□ -0.19
CAPN3-219ENST00000569136 ADGBQ8N7X0 1667 aa13.88□□□□□ -0.19
CAPN3-219ENST00000569136 FBXO31Q5XUX0 539 aaPredicted RBP13.88□□□□□ -0.19
CAPN3-219ENST00000569136 RIMS1Q86UR5 1692 aaKnown RBP13.88□□□□□ -0.19
CAPN3-219ENST00000569136 PLCG2P16885 1265 aa13.87□□□□□ -0.19
CAPN3-219ENST00000569136 IER5LQ5T953 404 aa13.87□□□□□ -0.19
CAPN3-219ENST00000569136 PTPRKQ15262 1439 aa13.87□□□□□ -0.19
CAPN3-219ENST00000569136 FAM135AQ9P2D6 1515 aa13.86□□□□□ -0.19
CAPN3-219ENST00000569136 FBXO22Q8NEZ5 403 aa13.86□□□□□ -0.19
CAPN3-219ENST00000569136 LMTK3Q96Q04 1460 aa13.86□□□□□ -0.19
CAPN3-219ENST00000569136 ANKRD50Q9ULJ7 1429 aa13.85□□□□□ -0.19
CAPN3-219ENST00000569136 THEMISQ8N1K5 641 aaPredicted RBP13.85□□□□□ -0.19
CAPN3-219ENST00000569136 METRNQ9UJH8 293 aa13.85□□□□□ -0.19
CAPN3-219ENST00000569136 ADGRL2O95490 1459 aa13.85□□□□□ -0.19
CAPN3-219ENST00000569136 RRBP1Q9P2E9 1410 aaKnown RBP13.84□□□□□ -0.19
CAPN3-219ENST00000569136 TNRQ92752 1358 aa13.83□□□□□ -0.19
CAPN3-219ENST00000569136 FER1L4A9Z1Z3 1794 aa13.83□□□□□ -0.19
CAPN3-219ENST00000569136 DNMT1P26358 1616 aaKnown RBP13.83□□□□□ -0.2
CAPN3-219ENST00000569136 C7P10643 843 aa13.83□□□□□ -0.2
CAPN3-219ENST00000569136 OCEL1Q9H607 264 aa13.83□□□□□ -0.2
CAPN3-219ENST00000569136 IRX5P78411 483 aaPredicted RBP13.81□□□□□ -0.2
CAPN3-219ENST00000569136 MS4A4AQ96JQ5 239 aa13.81□□□□□ -0.2
CAPN3-219ENST00000569136 PZPP20742 1482 aa13.8□□□□□ -0.2
CAPN3-219ENST00000569136 KDM5DQ9BY66 1539 aa13.8□□□□□ -0.2
CAPN3-219ENST00000569136 ARHGAP31Q2M1Z3 1444 aa13.8□□□□□ -0.2
CAPN3-219ENST00000569136 SLC24A1O60721 1099 aa13.79□□□□□ -0.2
CAPN3-219ENST00000569136 PPP1R37O75864 691 aa13.78□□□□□ -0.2
CAPN3-219ENST00000569136 DPY19L2Q6NUT2 758 aa13.78□□□□□ -0.2
CAPN3-219ENST00000569136 ANKLE2Q86XL3 938 aa13.78□□□□□ -0.2
CAPN3-219ENST00000569136 SLC52A1Q9NWF4 448 aa13.78□□□□□ -0.2
CAPN3-219ENST00000569136 COLQQ9Y215 455 aaPredicted RBP13.78□□□□□ -0.2
CAPN3-219ENST00000569136 G3V3G9 751 aa13.77□□□□□ -0.21
CAPN3-219ENST00000569136 ACIN1Q9UKV3 1341 aaKnown RBP13.77□□□□□ -0.21
CAPN3-219ENST00000569136 MROH2AA6NES4 1674 aa13.76□□□□□ -0.21
CAPN3-219ENST00000569136 EIF2AK4Q9P2K8 1649 aaKnown RBP13.76□□□□□ -0.21
CAPN3-219ENST00000569136 ABCC3O15438 1527 aa13.76□□□□□ -0.21
CAPN3-219ENST00000569136 NUP155O75694 1391 aa13.76□□□□□ -0.21
CAPN3-219ENST00000569136 PDCD7Q8N8D1 485 aaKnown RBP13.76□□□□□ -0.21
CAPN3-219ENST00000569136 TSHZ2Q9NRE2 1034 aa13.75□□□□□ -0.21
CAPN3-219ENST00000569136 NLRP1Q9C000 1473 aa13.74□□□□□ -0.21
CAPN3-219ENST00000569136 NCKAP5LQ9HCH0 1330 aa13.74□□□□□ -0.21
CAPN3-219ENST00000569136 IDI1Q13907 227 aa13.74□□□□□ -0.21
CAPN3-219ENST00000569136 C3P01024 1663 aa13.74□□□□□ -0.21
CAPN3-219ENST00000569136 RNF17Q9BXT8 1623 aaKnown RBP13.74□□□□□ -0.21
CAPN3-219ENST00000569136 A2ML1A8K2U0 1454 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms