RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 KDM2BQ8NHM5 1336 aa24.08■■□□□ 1.44
PKD1-235ENST00000568591 IQGAP1P46940 1657 aa24.07■■□□□ 1.44
PKD1-235ENST00000568591 ABCC1P33527 1531 aa24.06■■□□□ 1.44
PKD1-235ENST00000568591 SPAG9O60271 1321 aaKnown RBP24.06■■□□□ 1.44
PKD1-235ENST00000568591 GOLGA2Q08379 1002 aa24.05■■□□□ 1.44
PKD1-235ENST00000568591 NEFMP07197 916 aa24.05■■□□□ 1.44
PKD1-235ENST00000568591 SLC4A3P48751 1232 aa24.04■■□□□ 1.44
PKD1-235ENST00000568591 SCAF11Q99590 1463 aaKnown RBP24.04■■□□□ 1.44
PKD1-235ENST00000568591 CLTCL1P53675 1640 aa24.03■■□□□ 1.44
PKD1-235ENST00000568591 APAF1O14727 1248 aa24.01■■□□□ 1.43
PKD1-235ENST00000568591 DMRT2Q9Y5R5 561 aa24.01■■□□□ 1.43
PKD1-235ENST00000568591 ZCCHC11Q5TAX3 1644 aaKnown RBP24.01■■□□□ 1.43
PKD1-235ENST00000568591 CFAP70Q5T0N1 1121 aa24.01■■□□□ 1.43
PKD1-235ENST00000568591 TRPM2O94759 1503 aa24■■□□□ 1.43
PKD1-235ENST00000568591 ASXL1Q8IXJ9 1541 aa24■■□□□ 1.43
PKD1-235ENST00000568591 SLFN5Q08AF3 891 aa24■■□□□ 1.43
PKD1-235ENST00000568591 SYNMO15061 1565 aa23.99■■□□□ 1.43
PKD1-235ENST00000568591 MYOM1P52179 1685 aa23.98■■□□□ 1.43
PKD1-235ENST00000568591 SPHKAPQ2M3C7 1700 aa23.98■■□□□ 1.43
PKD1-235ENST00000568591 BCAR3O75815 825 aa23.98■■□□□ 1.43
PKD1-235ENST00000568591 PTPRTO14522 1441 aa23.97■■□□□ 1.43
PKD1-235ENST00000568591 UGGT1Q9NYU2 1555 aa23.97■■□□□ 1.43
PKD1-235ENST00000568591 CDCA8Q53HL2 280 aa23.97■■□□□ 1.43
PKD1-235ENST00000568591 CARD14Q9BXL6 1004 aa23.97■■□□□ 1.43
PKD1-235ENST00000568591 RGS3P49796 1198 aa23.96■■□□□ 1.43
PKD1-235ENST00000568591 CENPQQ7L2Z9 268 aaPredicted RBP23.96■■□□□ 1.43
PKD1-235ENST00000568591 ZFYVE16Q7Z3T8 1539 aa23.96■■□□□ 1.43
PKD1-235ENST00000568591 PIK3C2GO75747 1445 aa23.95■■□□□ 1.43
PKD1-235ENST00000568591 ADGRF5Q8IZF2 1346 aa23.95■■□□□ 1.42
PKD1-235ENST00000568591 SCAPERQ9BY12 1400 aa23.95■■□□□ 1.42
PKD1-235ENST00000568591 KIF3BO15066 747 aa23.94■■□□□ 1.42
PKD1-235ENST00000568591 CEP152O94986 1710 aa23.94■■□□□ 1.42
PKD1-235ENST00000568591 C8orf34Q49A92 452 aa23.93■■□□□ 1.42
PKD1-235ENST00000568591 TRMT2AQ8IZ69 625 aaKnown RBP23.92■■□□□ 1.42
PKD1-235ENST00000568591 ERVK-7P63135 1459 aa23.89■■□□□ 1.42
PKD1-235ENST00000568591 IL27Q8NEV9 243 aa23.88■■□□□ 1.41
PKD1-235ENST00000568591 EIF3AQ14152 1382 aaKnown RBP23.87■■□□□ 1.41
PKD1-235ENST00000568591 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.87■■□□□ 1.41
PKD1-235ENST00000568591 FAM161AQ3B820 660 aa23.87■■□□□ 1.41
PKD1-235ENST00000568591 RTEL1-TNFRSF6BF6WH68 1400 aa23.87■■□□□ 1.41
PKD1-235ENST00000568591 CLASP1Q7Z460 1538 aa23.87■■□□□ 1.41
PKD1-235ENST00000568591 NPC1L1Q9UHC9 1359 aa23.86■■□□□ 1.41
PKD1-235ENST00000568591 TNNT2P45379 298 aaPredicted RBP23.86■■□□□ 1.41
PKD1-235ENST00000568591 DDRGK1Q96HY6 314 aa23.86■■□□□ 1.41
PKD1-235ENST00000568591 NKTRP30414 1462 aaKnown RBP23.86■■□□□ 1.41
PKD1-235ENST00000568591 PPM1GO15355 546 aaPredicted RBP23.85■■□□□ 1.41
PKD1-235ENST00000568591 DEPDC5O75140 1603 aa23.85■■□□□ 1.41
PKD1-235ENST00000568591 KDM5AP29375 1690 aaKnown RBP23.85■■□□□ 1.41
PKD1-235ENST00000568591 TET3O43151 1660 aa23.84■■□□□ 1.41
PKD1-235ENST00000568591 IGHDP01880 384 aa23.84■■□□□ 1.41
PKD1-235ENST00000568591 ABCA6Q8N139 1617 aa23.83■■□□□ 1.4
PKD1-235ENST00000568591 NEUROD2Q15784 382 aa23.82■■□□□ 1.4
PKD1-235ENST00000568591 USP35Q9P2H5 1018 aa23.82■■□□□ 1.4
PKD1-235ENST00000568591 KANK1Q14678 1352 aa23.82■■□□□ 1.4
PKD1-235ENST00000568591 ATP7AQ04656 1500 aa23.82■■□□□ 1.4
PKD1-235ENST00000568591 UHRF1BP1LA0JNW5 1464 aa23.81■■□□□ 1.4
PKD1-235ENST00000568591 STAC3Q96MF2 364 aa23.81■■□□□ 1.4
PKD1-235ENST00000568591 RRP7AQ9Y3A4 280 aaKnown RBP23.81■■□□□ 1.4
PKD1-235ENST00000568591 E9PSI1 815 aa23.8■■□□□ 1.4
PKD1-235ENST00000568591 NFKBIBQ15653 356 aa23.8■■□□□ 1.4
PKD1-235ENST00000568591 PANK1Q8TE04 598 aa23.8■■□□□ 1.4
PKD1-235ENST00000568591 FANCAO15360 1455 aa23.8■■□□□ 1.4
PKD1-235ENST00000568591 RTN4Q9NQC3 1192 aaKnown RBP23.79■■□□□ 1.4
PKD1-235ENST00000568591 VWDEQ8N2E2 1590 aa23.79■■□□□ 1.4
PKD1-235ENST00000568591 MAP3K4Q9Y6R4 1608 aa23.79■■□□□ 1.4
PKD1-235ENST00000568591 CHGAP10645 457 aaKnown RBP23.78■■□□□ 1.4
PKD1-235ENST00000568591 COG6Q9Y2V7 657 aa23.78■■□□□ 1.4
PKD1-235ENST00000568591 WWC1Q8IX03 1113 aa23.77■■□□□ 1.4
PKD1-235ENST00000568591 TRAK1Q9UPV9 953 aa23.77■■□□□ 1.4
PKD1-235ENST00000568591 MROH1Q8NDA8 1641 aa23.77■■□□□ 1.4
PKD1-235ENST00000568591 SLC12A5Q9H2X9 1139 aa23.76■■□□□ 1.39
PKD1-235ENST00000568591 INO80Q9ULG1 1556 aaPredicted RBP23.76■■□□□ 1.39
PKD1-235ENST00000568591 TNNQ9UQP3 1299 aa23.75■■□□□ 1.39
PKD1-235ENST00000568591 FRAT1Q92837 279 aaPredicted RBP23.74■■□□□ 1.39
PKD1-235ENST00000568591 DAXXQ9UER7 740 aaPredicted RBP23.74■■□□□ 1.39
PKD1-235ENST00000568591 KIAA1210Q9ULL0 1709 aa23.74■■□□□ 1.39
PKD1-235ENST00000568591 MROH2AA6NES4 1674 aa23.73■■□□□ 1.39
PKD1-235ENST00000568591 TMEM132EQ6IEE7 984 aa23.73■■□□□ 1.39
PKD1-235ENST00000568591 ADGRL1O94910 1474 aa23.73■■□□□ 1.39
PKD1-235ENST00000568591 MYOM2P54296 1465 aa23.73■■□□□ 1.39
PKD1-235ENST00000568591 CENPJQ9HC77 1338 aaPredicted RBP23.73■■□□□ 1.39
PKD1-235ENST00000568591 NOS1P29475 1434 aa23.73■■□□□ 1.39
PKD1-235ENST00000568591 NSD3Q9BZ95 1437 aa23.72■■□□□ 1.39
PKD1-235ENST00000568591 SEC24BO95487 1268 aa23.71■■□□□ 1.39
PKD1-235ENST00000568591 CANXP27824 592 aaKnown RBP23.71■■□□□ 1.39
PKD1-235ENST00000568591 BCL2L13Q9BXK5 485 aa23.71■■□□□ 1.39
PKD1-235ENST00000568591 ARAP3Q8WWN8 1544 aa23.7■■□□□ 1.39
PKD1-235ENST00000568591 MORC1Q86VD1 984 aa23.7■■□□□ 1.38
PKD1-235ENST00000568591 ABCA9Q8IUA7 1624 aa23.69■■□□□ 1.38
PKD1-235ENST00000568591 POLR3AO14802 1390 aaPredicted RBP23.69■■□□□ 1.38
PKD1-235ENST00000568591 CLUAP1Q96AJ1 413 aa23.69■■□□□ 1.38
PKD1-235ENST00000568591 USP19O94966 1318 aa23.68■■□□□ 1.38
PKD1-235ENST00000568591 NUTM2DQ5VT03 806 aaPredicted RBP23.67■■□□□ 1.38
PKD1-235ENST00000568591 PPRC1Q5VV67 1664 aaKnown RBP23.67■■□□□ 1.38
PKD1-235ENST00000568591 FRAT2O75474 233 aaPredicted RBP23.67■■□□□ 1.38
PKD1-235ENST00000568591 RLBP1P12271 317 aa23.67■■□□□ 1.38
PKD1-235ENST00000568591 TCP11L2Q8N4U5 519 aa23.67■■□□□ 1.38
PKD1-235ENST00000568591 SENP3Q9H4L4 574 aaPredicted RBP23.67■■□□□ 1.38
PKD1-235ENST00000568591 EFCAB6Q5THR3 1501 aa23.67■■□□□ 1.38
PKD1-235ENST00000568591 PDE3AQ14432 1141 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms