RNA–Protein interactions for RNA: ENST00000568428.5

SCAPER-220, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 590 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-220ENST00000568428 LMOD2Q6P5Q4 547 aa10.91□□□□□ -0.66
SCAPER-220ENST00000568428 PHOX2BQ99453 314 aa10.91□□□□□ -0.66
SCAPER-220ENST00000568428 SLC24A1O60721 1099 aa10.9□□□□□ -0.66
SCAPER-220ENST00000568428 RGS20O76081 388 aa10.9□□□□□ -0.66
SCAPER-220ENST00000568428 NECTIN2Q92692 538 aa10.89□□□□□ -0.67
SCAPER-220ENST00000568428 SLC4A3P48751 1232 aa10.88□□□□□ -0.67
SCAPER-220ENST00000568428 MAP2K5Q13163 448 aa10.88□□□□□ -0.67
SCAPER-220ENST00000568428 IRF6O14896 467 aa10.87□□□□□ -0.67
SCAPER-220ENST00000568428 TJAP1Q5JTD0 557 aa10.87□□□□□ -0.67
SCAPER-220ENST00000568428 SLC10A3P09131 477 aa10.86□□□□□ -0.67
SCAPER-220ENST00000568428 MINK1Q8N4C8 1332 aaPredicted RBP10.85□□□□□ -0.67
SCAPER-220ENST00000568428 KCNC4Q03721 635 aa10.85□□□□□ -0.67
SCAPER-220ENST00000568428 NLRP7Q8WX94 980 aa10.85□□□□□ -0.67
SCAPER-220ENST00000568428 DAXXQ9UER7 740 aaPredicted RBP10.85□□□□□ -0.67
SCAPER-220ENST00000568428 MTRQ99707 1265 aa10.83□□□□□ -0.68
SCAPER-220ENST00000568428 A0A0G2JS52 829 aa10.82□□□□□ -0.68
SCAPER-220ENST00000568428 ZC3H15Q8WU90 426 aaKnown RBP10.82□□□□□ -0.68
SCAPER-220ENST00000568428 ZMYND10O75800 440 aa10.81□□□□□ -0.68
SCAPER-220ENST00000568428 IL21Q9HBE4 155 aa10.81□□□□□ -0.68
SCAPER-220ENST00000568428 BARGINQ6ZT62 677 aa10.8□□□□□ -0.68
SCAPER-220ENST00000568428 ZNF516Q92618 1163 aa10.8□□□□□ -0.68
SCAPER-220ENST00000568428 PRR14Q9BWN1 585 aa10.8□□□□□ -0.68
SCAPER-220ENST00000568428 CFHP08603 1231 aa10.79□□□□□ -0.68
SCAPER-220ENST00000568428 CCDC102AQ96A19 550 aa10.79□□□□□ -0.68
SCAPER-220ENST00000568428 ACTN4O43707 911 aaKnown RBP10.78□□□□□ -0.68
SCAPER-220ENST00000568428 IRX2Q9BZI1 471 aaPredicted RBP10.78□□□□□ -0.68
SCAPER-220ENST00000568428 PCDHB3Q9Y5E6 796 aa10.77□□□□□ -0.69
SCAPER-220ENST00000568428 COPS2P61201 443 aa10.76□□□□□ -0.69
SCAPER-220ENST00000568428 KMT5BQ4FZB7 885 aa10.76□□□□□ -0.69
SCAPER-220ENST00000568428 RSPH4AQ5TD94 716 aa10.76□□□□□ -0.69
SCAPER-220ENST00000568428 DDX11L8A8MPP1 907 aa10.75□□□□□ -0.69
SCAPER-220ENST00000568428 BLOC1S3Q6QNY0 202 aa10.74□□□□□ -0.69
SCAPER-220ENST00000568428 ZPR1O75312 459 aa10.73□□□□□ -0.69
SCAPER-220ENST00000568428 SULF1Q8IWU6 871 aa10.73□□□□□ -0.69
SCAPER-220ENST00000568428 KRI1Q8N9T8 703 aaKnown RBP10.73□□□□□ -0.69
SCAPER-220ENST00000568428 NKX2-3Q8TAU0 364 aa10.73□□□□□ -0.69
SCAPER-220ENST00000568428 MDM2Q00987 491 aaPredicted RBP10.72□□□□□ -0.69
SCAPER-220ENST00000568428 RDH13Q8NBN7 331 aa10.72□□□□□ -0.69
SCAPER-220ENST00000568428 TMUB1Q9BVT8 246 aa10.72□□□□□ -0.69
SCAPER-220ENST00000568428 GCGRP47871 477 aa10.71□□□□□ -0.69
SCAPER-220ENST00000568428 CD46P15529 392 aa10.69□□□□□ -0.7
SCAPER-220ENST00000568428 BCANQ96GW7 911 aa10.69□□□□□ -0.7
SCAPER-220ENST00000568428 REPIN1Q9BWE0 567 aaKnown RBP10.68□□□□□ -0.7
SCAPER-220ENST00000568428 FUT2Q10981 343 aa10.67□□□□□ -0.7
SCAPER-220ENST00000568428 PUS10Q3MIT2 529 aaKnown RBP10.67□□□□□ -0.7
SCAPER-220ENST00000568428 PPP1R18Q6NYC8 613 aa10.67□□□□□ -0.7
SCAPER-220ENST00000568428 SCUBE3Q8IX30 993 aa10.67□□□□□ -0.7
SCAPER-220ENST00000568428 GPCPD1Q9NPB8 672 aa10.67□□□□□ -0.7
SCAPER-220ENST00000568428 CLCN1P35523 988 aa10.66□□□□□ -0.7
SCAPER-220ENST00000568428 NR1I2O75469 434 aa10.65□□□□□ -0.7
SCAPER-220ENST00000568428 ATP6V1AP38606 617 aa10.65□□□□□ -0.7
SCAPER-220ENST00000568428 AMHR2Q16671 573 aa10.65□□□□□ -0.7
SCAPER-220ENST00000568428 MORN1Q5T089 497 aa10.65□□□□□ -0.7
SCAPER-220ENST00000568428 FAM217BQ9NTX9 383 aaPredicted RBP10.65□□□□□ -0.7
SCAPER-220ENST00000568428 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.64□□□□□ -0.71
SCAPER-220ENST00000568428 TLL1O43897 1013 aa10.63□□□□□ -0.71
SCAPER-220ENST00000568428 AK7Q96M32 723 aa10.62□□□□□ -0.71
SCAPER-220ENST00000568428 TRIM66O15016 1216 aa10.61□□□□□ -0.71
SCAPER-220ENST00000568428 SLC27A5Q9Y2P5 690 aa10.6□□□□□ -0.71
SCAPER-220ENST00000568428 KDM4AO75164 1064 aa10.59□□□□□ -0.71
SCAPER-220ENST00000568428 SSTR3P32745 418 aaPredicted RBP10.59□□□□□ -0.71
SCAPER-220ENST00000568428 THAP11Q96EK4 314 aa10.59□□□□□ -0.71
SCAPER-220ENST00000568428 ADH1BP00325 375 aa10.58□□□□□ -0.72
SCAPER-220ENST00000568428 GGCXP38435 758 aa10.57□□□□□ -0.72
SCAPER-220ENST00000568428 SPSB2Q99619 263 aa10.57□□□□□ -0.72
SCAPER-220ENST00000568428 SLC24A3Q9HC58 644 aa10.57□□□□□ -0.72
SCAPER-220ENST00000568428 SALL2Q9Y467 1007 aaPredicted RBP10.57□□□□□ -0.72
SCAPER-220ENST00000568428 RNF223E7ERA6 249 aa10.56□□□□□ -0.72
SCAPER-220ENST00000568428 TTLL12Q14166 644 aaPredicted RBP10.56□□□□□ -0.72
SCAPER-220ENST00000568428 GRIPAP1Q4V328 841 aa10.56□□□□□ -0.72
SCAPER-220ENST00000568428 S1PR4O95977 384 aa10.55□□□□□ -0.72
SCAPER-220ENST00000568428 USP46P62068 366 aa10.55□□□□□ -0.72
SCAPER-220ENST00000568428 BRICD5Q6PL45 260 aa10.55□□□□□ -0.72
SCAPER-220ENST00000568428 GIGYF2Q6Y7W6 1299 aaKnown RBP10.55□□□□□ -0.72
SCAPER-220ENST00000568428 PARP9Q8IXQ6 854 aa10.55□□□□□ -0.72
SCAPER-220ENST00000568428 Q6ZNB5 142 aa10.54□□□□□ -0.72
SCAPER-220ENST00000568428 FMNL1O95466 1100 aaPredicted RBP10.53□□□□□ -0.72
SCAPER-220ENST00000568428 FAM160A2Q8N612 972 aaPredicted RBP10.53□□□□□ -0.72
SCAPER-220ENST00000568428 PRKD2Q9BZL6 878 aa10.53□□□□□ -0.72
SCAPER-220ENST00000568428 SLC6A16Q9GZN6 736 aa10.53□□□□□ -0.72
SCAPER-220ENST00000568428 PPEF1O14829 653 aaPredicted RBP10.52□□□□□ -0.73
SCAPER-220ENST00000568428 HOXA2O43364 376 aa10.52□□□□□ -0.73
SCAPER-220ENST00000568428 RNF19BQ6ZMZ0 732 aa10.52□□□□□ -0.73
SCAPER-220ENST00000568428 HLA-CQ95604 372 aa10.52□□□□□ -0.73
SCAPER-220ENST00000568428 V9GY48 417 aaPredicted RBP10.52□□□□□ -0.73
SCAPER-220ENST00000568428 PDE4DQ08499 809 aa10.51□□□□□ -0.73
SCAPER-220ENST00000568428 ANKLE1Q8NAG6 615 aa10.51□□□□□ -0.73
SCAPER-220ENST00000568428 EMID1Q96A84 441 aaPredicted RBP10.51□□□□□ -0.73
SCAPER-220ENST00000568428 LAPTM4AQ15012 233 aa10.5□□□□□ -0.73
SCAPER-220ENST00000568428 NUTM1Q86Y26 1132 aa10.5□□□□□ -0.73
SCAPER-220ENST00000568428 MS4A1P11836 297 aa10.49□□□□□ -0.73
SCAPER-220ENST00000568428 Q3C1V9 767 aa10.49□□□□□ -0.73
SCAPER-220ENST00000568428 SPIRE2Q8WWL2 714 aa10.49□□□□□ -0.73
SCAPER-220ENST00000568428 BEGAINQ9BUH8 593 aa10.48□□□□□ -0.73
SCAPER-220ENST00000568428 GUCA2AQ02747 115 aa10.47□□□□□ -0.73
SCAPER-220ENST00000568428 MSS51Q4VC12 460 aa10.46□□□□□ -0.73
SCAPER-220ENST00000568428 PLA2G2CQ5R387 149 aa10.45□□□□□ -0.74
SCAPER-220ENST00000568428 LIAT1Q6ZQX7 453 aa10.45□□□□□ -0.74
SCAPER-220ENST00000568428 PCDHGC3Q9UN70 934 aa10.45□□□□□ -0.74
SCAPER-220ENST00000568428 SLC19A1P41440 591 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms