RNA–Protein interactions for RNA: ENST00000567946.1

PKD1-234, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,822 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-234ENST00000567946 IFT172Q9UG01 1749 aa22.6■■□□□ 1.21
PKD1-234ENST00000567946 MYOM2P54296 1465 aa22.6■■□□□ 1.21
PKD1-234ENST00000567946 ERVK-7P63135 1459 aa22.6■■□□□ 1.21
PKD1-234ENST00000567946 ZMYM3Q14202 1370 aa22.58■■□□□ 1.21
PKD1-234ENST00000567946 PRKRIP1Q9H875 184 aaPredicted RBP22.57■■□□□ 1.2
PKD1-234ENST00000567946 SPATA31D1Q6ZQQ2 1576 aa22.57■■□□□ 1.2
PKD1-234ENST00000567946 IQGAP1P46940 1657 aa22.56■■□□□ 1.2
PKD1-234ENST00000567946 MYO5BQ9ULV0 1848 aa22.56■■□□□ 1.2
PKD1-234ENST00000567946 IDI1Q13907 227 aa22.56■■□□□ 1.2
PKD1-234ENST00000567946 GTF3C3Q9Y5Q9 886 aa22.56■■□□□ 1.2
PKD1-234ENST00000567946 KIAA1210Q9ULL0 1709 aa22.56■■□□□ 1.2
PKD1-234ENST00000567946 FER1L4A9Z1Z3 1794 aa22.55■■□□□ 1.2
PKD1-234ENST00000567946 CHGAP10645 457 aaKnown RBP22.54■■□□□ 1.2
PKD1-234ENST00000567946 PLPPR3Q6T4P5 718 aa22.54■■□□□ 1.2
PKD1-234ENST00000567946 TESK2Q96S53 571 aa22.53■■□□□ 1.2
PKD1-234ENST00000567946 ESF1Q9H501 851 aaKnown RBP22.53■■□□□ 1.2
PKD1-234ENST00000567946 ADGRF5Q8IZF2 1346 aa22.53■■□□□ 1.2
PKD1-234ENST00000567946 SLC52A1Q9NWF4 448 aa22.52■■□□□ 1.2
PKD1-234ENST00000567946 NRXN1Q9ULB1 1477 aa22.52■■□□□ 1.2
PKD1-234ENST00000567946 SCAF11Q99590 1463 aaKnown RBP22.51■■□□□ 1.19
PKD1-234ENST00000567946 PPLO60437 1756 aa22.51■■□□□ 1.19
PKD1-234ENST00000567946 DISP3Q9P2K9 1392 aa22.51■■□□□ 1.19
PKD1-234ENST00000567946 TMEM131LA2VDJ0 1609 aa22.5■■□□□ 1.19
PKD1-234ENST00000567946 ADAMTSL3P82987 1691 aa22.5■■□□□ 1.19
PKD1-234ENST00000567946 KDM4FA0A1W2PPD8 638 aa22.5■■□□□ 1.19
PKD1-234ENST00000567946 C3P01024 1663 aa22.49■■□□□ 1.19
PKD1-234ENST00000567946 RIMS1Q86UR5 1692 aaKnown RBP22.48■■□□□ 1.19
PKD1-234ENST00000567946 CFAP70Q5T0N1 1121 aa22.47■■□□□ 1.19
PKD1-234ENST00000567946 CEBPAP49715 358 aaPredicted RBP22.47■■□□□ 1.19
PKD1-234ENST00000567946 CCDC184Q52MB2 194 aa22.46■■□□□ 1.19
PKD1-234ENST00000567946 TMF1P82094 1093 aa22.45■■□□□ 1.19
PKD1-234ENST00000567946 NEXMIFQ5QGS0 1516 aa22.44■■□□□ 1.18
PKD1-234ENST00000567946 RPGRIP1LQ68CZ1 1315 aa22.43■■□□□ 1.18
PKD1-234ENST00000567946 PIK3C2GO75747 1445 aa22.42■■□□□ 1.18
PKD1-234ENST00000567946 EIF3AQ14152 1382 aaKnown RBP22.42■■□□□ 1.18
PKD1-234ENST00000567946 CNGB1Q14028 1251 aaPredicted RBP22.41■■□□□ 1.18
PKD1-234ENST00000567946 TNRQ92752 1358 aa22.4■■□□□ 1.18
PKD1-234ENST00000567946 MRS2Q9HD23 443 aa22.39■■□□□ 1.17
PKD1-234ENST00000567946 SETBP1Q9Y6X0 1596 aa22.39■■□□□ 1.17
PKD1-234ENST00000567946 A2ML1A8K2U0 1454 aa22.38■■□□□ 1.17
PKD1-234ENST00000567946 NUTM2DQ5VT03 806 aaPredicted RBP22.36■■□□□ 1.17
PKD1-234ENST00000567946 C14orf93Q9H972 538 aaKnown RBP22.35■■□□□ 1.17
PKD1-234ENST00000567946 PTPRMP28827 1452 aa22.34■■□□□ 1.17
PKD1-234ENST00000567946 UBR1Q8IWV7 1749 aa22.34■■□□□ 1.17
PKD1-234ENST00000567946 ADGRB1O14514 1584 aa22.33■■□□□ 1.17
PKD1-234ENST00000567946 MYO3AQ8NEV4 1616 aa22.33■■□□□ 1.17
PKD1-234ENST00000567946 KDM5AP29375 1690 aaKnown RBP22.33■■□□□ 1.17
PKD1-234ENST00000567946 ZFYVE9O95405 1425 aa22.32■■□□□ 1.16
PKD1-234ENST00000567946 STAG3Q9UJ98 1225 aa22.31■■□□□ 1.16
PKD1-234ENST00000567946 VGFO15240 615 aaPredicted RBP22.31■■□□□ 1.16
PKD1-234ENST00000567946 PER1O15534 1290 aaPredicted RBP22.31■■□□□ 1.16
PKD1-234ENST00000567946 HNRNPUQ00839 825 aaKnown RBP eCLIP22.31■■□□□ 1.16
PKD1-234ENST00000567946 KTN1Q86UP2 1357 aaKnown RBP22.3■■□□□ 1.16
PKD1-234ENST00000567946 FAM9BQ8IZU0 186 aa22.3■■□□□ 1.16
PKD1-234ENST00000567946 PANK3Q9H999 370 aa22.3■■□□□ 1.16
PKD1-234ENST00000567946 CDCA8Q53HL2 280 aa22.29■■□□□ 1.16
PKD1-234ENST00000567946 NLRP1Q9C000 1473 aa22.29■■□□□ 1.16
PKD1-234ENST00000567946 RALBP1Q15311 655 aa22.29■■□□□ 1.16
PKD1-234ENST00000567946 TMEM132EQ6IEE7 984 aa22.27■■□□□ 1.15
PKD1-234ENST00000567946 MYOM1P52179 1685 aa22.26■■□□□ 1.15
PKD1-234ENST00000567946 RIMS2Q9UQ26 1411 aa22.26■■□□□ 1.15
PKD1-234ENST00000567946 MYBBP1AQ9BQG0 1328 aaKnown RBP22.26■■□□□ 1.15
PKD1-234ENST00000567946 PARD3Q8TEW0 1356 aa22.25■■□□□ 1.15
PKD1-234ENST00000567946 TRAK1Q9UPV9 953 aa22.25■■□□□ 1.15
PKD1-234ENST00000567946 SBNO2Q9Y2G9 1366 aa22.25■■□□□ 1.15
PKD1-234ENST00000567946 CENPJQ9HC77 1338 aaPredicted RBP22.25■■□□□ 1.15
PKD1-234ENST00000567946 SETD1BQ9UPS6 1966 aaKnown RBP22.24■■□□□ 1.15
PKD1-234ENST00000567946 SLC24A1O60721 1099 aa22.23■■□□□ 1.15
PKD1-234ENST00000567946 QRICH2Q9H0J4 1663 aa22.22■■□□□ 1.15
PKD1-234ENST00000567946 SENP3Q9H4L4 574 aaPredicted RBP22.21■■□□□ 1.15
PKD1-234ENST00000567946 BRD4O60885 1362 aaPredicted RBP22.21■■□□□ 1.15
PKD1-234ENST00000567946 ASXL1Q8IXJ9 1541 aa22.2■■□□□ 1.14
PKD1-234ENST00000567946 TMEM2Q9UHN6 1383 aa22.2■■□□□ 1.14
PKD1-234ENST00000567946 CC2D1BQ5T0F9 858 aaKnown RBP22.2■■□□□ 1.14
PKD1-234ENST00000567946 NRXN3Q9Y4C0 1643 aa22.19■■□□□ 1.14
PKD1-234ENST00000567946 ARHGEF28Q8N1W1 1705 aaKnown RBP22.19■■□□□ 1.14
PKD1-234ENST00000567946 TMC1Q8TDI8 760 aa22.19■■□□□ 1.14
PKD1-234ENST00000567946 SETD1AO15047 1707 aaKnown RBP22.18■■□□□ 1.14
PKD1-234ENST00000567946 ALKQ9UM73 1620 aa22.18■■□□□ 1.14
PKD1-234ENST00000567946 CEP170BQ9Y4F5 1589 aaPredicted RBP22.16■■□□□ 1.14
PKD1-234ENST00000567946 PNISRQ8TF01 805 aaKnown RBP22.16■■□□□ 1.14
PKD1-234ENST00000567946 ARHGAP23Q9P227 1491 aa22.15■■□□□ 1.14
PKD1-234ENST00000567946 SLIT1O75093 1534 aa22.15■■□□□ 1.14
PKD1-234ENST00000567946 LTKP29376 864 aa22.15■■□□□ 1.14
PKD1-234ENST00000567946 NLRP13Q86W25 1043 aa22.15■■□□□ 1.14
PKD1-234ENST00000567946 KNSTRNQ9Y448 316 aa22.15■■□□□ 1.14
PKD1-234ENST00000567946 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.14■■□□□ 1.13
PKD1-234ENST00000567946 ZNF142P52746 1687 aaPredicted RBP22.14■■□□□ 1.13
PKD1-234ENST00000567946 ZBED9Q6R2W3 1325 aa22.12■■□□□ 1.13
PKD1-234ENST00000567946 AMER1Q5JTC6 1135 aaPredicted RBP22.11■■□□□ 1.13
PKD1-234ENST00000567946 THEMISQ8N1K5 641 aaPredicted RBP22.1■■□□□ 1.13
PKD1-234ENST00000567946 LRPPRCP42704 1394 aaKnown RBP22.1■■□□□ 1.13
PKD1-234ENST00000567946 HDGFP51858 240 aaKnown RBP22.09■■□□□ 1.13
PKD1-234ENST00000567946 TULP4Q9NRJ4 1543 aa22.08■■□□□ 1.13
PKD1-234ENST00000567946 STK26Q9P289 416 aa22.08■■□□□ 1.13
PKD1-234ENST00000567946 YTHDC2Q9H6S0 1430 aaKnown RBP22.08■■□□□ 1.12
PKD1-234ENST00000567946 TXNDC2Q86VQ3 553 aa22.08■■□□□ 1.12
PKD1-234ENST00000567946 SUPT16HQ9Y5B9 1047 aaKnown RBP22.07■■□□□ 1.12
PKD1-234ENST00000567946 NPC1L1Q9UHC9 1359 aa22.06■■□□□ 1.12
PKD1-234ENST00000567946 ADAMTS13Q76LX8 1427 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms