RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 OATP04181 439 aa9.11□□□□□ -0.95
CDH1-211ENST00000567320 HIC1Q14526 733 aa9.11□□□□□ -0.95
CDH1-211ENST00000567320 PCDHB3Q9Y5E6 796 aa9.11□□□□□ -0.95
CDH1-211ENST00000567320 PPP1R18Q6NYC8 613 aa9.1□□□□□ -0.95
CDH1-211ENST00000567320 KMT5BQ4FZB7 885 aa9.09□□□□□ -0.95
CDH1-211ENST00000567320 NKX2-3Q8TAU0 364 aa9.09□□□□□ -0.95
CDH1-211ENST00000567320 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.08□□□□□ -0.96
CDH1-211ENST00000567320 GNPATO15228 680 aa9.07□□□□□ -0.96
CDH1-211ENST00000567320 CFHP08603 1231 aa9.07□□□□□ -0.96
CDH1-211ENST00000567320 GGCXP38435 758 aa9.07□□□□□ -0.96
CDH1-211ENST00000567320 TULP1O00294 542 aaPredicted RBP9.06□□□□□ -0.96
CDH1-211ENST00000567320 ZPR1O75312 459 aa9.06□□□□□ -0.96
CDH1-211ENST00000567320 RSPH4AQ5TD94 716 aa9.06□□□□□ -0.96
CDH1-211ENST00000567320 BLOC1S3Q6QNY0 202 aa9.06□□□□□ -0.96
CDH1-211ENST00000567320 PXYLP1Q8TE99 480 aa9.06□□□□□ -0.96
CDH1-211ENST00000567320 PRKD2Q9BZL6 878 aa9.06□□□□□ -0.96
CDH1-211ENST00000567320 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.06□□□□□ -0.96
CDH1-211ENST00000567320 FECHP22830 423 aa9.05□□□□□ -0.96
CDH1-211ENST00000567320 GPIHBP1Q8IV16 184 aa9.05□□□□□ -0.96
CDH1-211ENST00000567320 VSIG10Q8N0Z9 540 aa9.05□□□□□ -0.96
CDH1-211ENST00000567320 METTL3Q86U44 580 aaKnown RBP9.04□□□□□ -0.96
CDH1-211ENST00000567320 Q6ZNB5 142 aa9.03□□□□□ -0.96
CDH1-211ENST00000567320 ACTN4O43707 911 aaKnown RBP9.02□□□□□ -0.97
CDH1-211ENST00000567320 SLC10A3P09131 477 aa9.02□□□□□ -0.97
CDH1-211ENST00000567320 RDH13Q8NBN7 331 aa9.02□□□□□ -0.97
CDH1-211ENST00000567320 NLRP7Q8WX94 980 aa9.01□□□□□ -0.97
CDH1-211ENST00000567320 TLL1O43897 1013 aa9□□□□□ -0.97
CDH1-211ENST00000567320 DDX11L8A8MPP1 907 aa8.99□□□□□ -0.97
CDH1-211ENST00000567320 GPR37O15354 613 aa8.99□□□□□ -0.97
CDH1-211ENST00000567320 GFRA3O60609 400 aa8.99□□□□□ -0.97
CDH1-211ENST00000567320 NR1I2O75469 434 aa8.99□□□□□ -0.97
CDH1-211ENST00000567320 PUS10Q3MIT2 529 aaKnown RBP8.97□□□□□ -0.97
CDH1-211ENST00000567320 TMUB1Q9BVT8 246 aa8.97□□□□□ -0.97
CDH1-211ENST00000567320 DAXXQ9UER7 740 aaPredicted RBP8.97□□□□□ -0.97
CDH1-211ENST00000567320 V9GY48 417 aaPredicted RBP8.97□□□□□ -0.97
CDH1-211ENST00000567320 LAPTM4AQ15012 233 aa8.96□□□□□ -0.98
CDH1-211ENST00000567320 RNF223E7ERA6 249 aa8.94□□□□□ -0.98
CDH1-211ENST00000567320 S1PR4O95977 384 aa8.94□□□□□ -0.98
CDH1-211ENST00000567320 SULF1Q8IWU6 871 aa8.94□□□□□ -0.98
CDH1-211ENST00000567320 PPEF1O14829 653 aaPredicted RBP8.93□□□□□ -0.98
CDH1-211ENST00000567320 SCUBE3Q8IX30 993 aa8.93□□□□□ -0.98
CDH1-211ENST00000567320 ADH1BP00325 375 aa8.92□□□□□ -0.98
CDH1-211ENST00000567320 PHOX2BQ99453 314 aa8.92□□□□□ -0.98
CDH1-211ENST00000567320 PDZRN3Q9UPQ7 1066 aa8.92□□□□□ -0.98
CDH1-211ENST00000567320 SLC19A1P41440 591 aa8.91□□□□□ -0.98
CDH1-211ENST00000567320 SLC6A16Q9GZN6 736 aa8.91□□□□□ -0.98
CDH1-211ENST00000567320 FUT2Q10981 343 aa8.9□□□□□ -0.98
CDH1-211ENST00000567320 SPSB2Q99619 263 aa8.9□□□□□ -0.98
CDH1-211ENST00000567320 NRG2O14511 850 aaPredicted RBP8.89□□□□□ -0.99
CDH1-211ENST00000567320 ATP6V1AP38606 617 aa8.89□□□□□ -0.99
CDH1-211ENST00000567320 MAP2K5Q13163 448 aa8.89□□□□□ -0.99
CDH1-211ENST00000567320 ANKLE1Q8NAG6 615 aa8.89□□□□□ -0.99
CDH1-211ENST00000567320 GCGRP47871 477 aa8.88□□□□□ -0.99
CDH1-211ENST00000567320 IRF6O14896 467 aa8.86□□□□□ -0.99
CDH1-211ENST00000567320 GRIPAP1Q4V328 841 aa8.86□□□□□ -0.99
CDH1-211ENST00000567320 MORN1Q5T089 497 aa8.86□□□□□ -0.99
CDH1-211ENST00000567320 KRI1Q8N9T8 703 aaKnown RBP8.86□□□□□ -0.99
CDH1-211ENST00000567320 FMNL1O95466 1100 aaPredicted RBP8.85□□□□□ -0.99
CDH1-211ENST00000567320 MDM2Q00987 491 aaPredicted RBP8.85□□□□□ -0.99
CDH1-211ENST00000567320 TRAF7Q6Q0C0 670 aa8.85□□□□□ -0.99
CDH1-211ENST00000567320 SLC27A5Q9Y2P5 690 aa8.85□□□□□ -0.99
CDH1-211ENST00000567320 MINK1Q8N4C8 1332 aaPredicted RBP8.84□□□□□ -0.99
CDH1-211ENST00000567320 SPRYD7Q5W111 196 aa8.84□□□□□ -0.99
CDH1-211ENST00000567320 LIAT1Q6ZQX7 453 aa8.83□□□□□ -1
CDH1-211ENST00000567320 ZNF697Q5TEC3 545 aa8.82□□□□□ -1
CDH1-211ENST00000567320 ZNF598Q86UK7 904 aaKnown RBP8.82□□□□□ -1
CDH1-211ENST00000567320 CCDC102AQ96A19 550 aa8.82□□□□□ -1
CDH1-211ENST00000567320 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.81□□□□□ -1
CDH1-211ENST00000567320 EMID1Q96A84 441 aaPredicted RBP8.81□□□□□ -1
CDH1-211ENST00000567320 LMOD2Q6P5Q4 547 aa8.8□□□□□ -1
CDH1-211ENST00000567320 TNFRSF10AO00220 468 aa8.79□□□□□ -1
CDH1-211ENST00000567320 KDM4AO75164 1064 aa8.79□□□□□ -1
CDH1-211ENST00000567320 CD46P15529 392 aa8.79□□□□□ -1
CDH1-211ENST00000567320 PKDCCQ504Y2 493 aa8.79□□□□□ -1
CDH1-211ENST00000567320 PLA2G2CQ5R387 149 aa8.79□□□□□ -1
CDH1-211ENST00000567320 THAP11Q96EK4 314 aa8.79□□□□□ -1
CDH1-211ENST00000567320 FCF1Q9Y324 198 aaKnown RBP8.79□□□□□ -1
CDH1-211ENST00000567320 CLCN1P35523 988 aa8.78□□□□□ -1
CDH1-211ENST00000567320 FOXC1Q12948 553 aa8.78□□□□□ -1
CDH1-211ENST00000567320 Q3C1V9 767 aa8.78□□□□□ -1
CDH1-211ENST00000567320 BRICD5Q6PL45 260 aa8.78□□□□□ -1
CDH1-211ENST00000567320 RNF19BQ6ZMZ0 732 aa8.78□□□□□ -1
CDH1-211ENST00000567320 PRDM9Q9NQV7 894 aa8.78□□□□□ -1
CDH1-211ENST00000567320 TRIM67Q6ZTA4 783 aa8.77□□□□□ -1.01
CDH1-211ENST00000567320 FAM160A2Q8N612 972 aaPredicted RBP8.77□□□□□ -1.01
CDH1-211ENST00000567320 GPCPD1Q9NPB8 672 aa8.77□□□□□ -1.01
CDH1-211ENST00000567320 LCE2BO14633 110 aa8.76□□□□□ -1.01
CDH1-211ENST00000567320 ZBTB24O43167 697 aaPredicted RBP8.76□□□□□ -1.01
CDH1-211ENST00000567320 SALL2Q9Y467 1007 aaPredicted RBP8.76□□□□□ -1.01
CDH1-211ENST00000567320 CD2BP2O95400 341 aaKnown RBP8.75□□□□□ -1.01
CDH1-211ENST00000567320 NUTM1Q86Y26 1132 aa8.75□□□□□ -1.01
CDH1-211ENST00000567320 FAM187AA6NFU0 413 aa8.74□□□□□ -1.01
CDH1-211ENST00000567320 RPIAP49247 311 aa8.73□□□□□ -1.01
CDH1-211ENST00000567320 USP46P62068 366 aa8.73□□□□□ -1.01
CDH1-211ENST00000567320 PRR20EP86478 221 aa8.73□□□□□ -1.01
CDH1-211ENST00000567320 PRR20CP86479 221 aa8.73□□□□□ -1.01
CDH1-211ENST00000567320 PRR20DP86480 221 aa8.73□□□□□ -1.01
CDH1-211ENST00000567320 PRR20BP86481 221 aa8.73□□□□□ -1.01
CDH1-211ENST00000567320 PRR20AP86496 221 aa8.73□□□□□ -1.01
CDH1-211ENST00000567320 TTLL12Q14166 644 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms