RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 PLSCR2Q9NRY7 297 aa7.83□□□□□ -1.16
PTPN9-204ENST00000564970 CGNQ9P2M7 1197 aaKnown RBP7.83□□□□□ -1.16
PTPN9-204ENST00000564970 KIAA1107Q9UPP5 1409 aa7.83□□□□□ -1.16
PTPN9-204ENST00000564970 HECW2Q9P2P5 1572 aa7.83□□□□□ -1.16
PTPN9-204ENST00000564970 ERBB4Q15303 1308 aa7.82□□□□□ -1.16
PTPN9-204ENST00000564970 CCDC88BA6NC98 1476 aa7.82□□□□□ -1.16
PTPN9-204ENST00000564970 MAFGO15525 162 aa7.82□□□□□ -1.16
PTPN9-204ENST00000564970 SYCP1Q15431 976 aa7.82□□□□□ -1.16
PTPN9-204ENST00000564970 CENPQQ7L2Z9 268 aaPredicted RBP7.82□□□□□ -1.16
PTPN9-204ENST00000564970 OGFRQ9NZT2 677 aa7.82□□□□□ -1.16
PTPN9-204ENST00000564970 CEP83Q9Y592 693 aa7.82□□□□□ -1.16
PTPN9-204ENST00000564970 SOX12O15370 315 aa7.81□□□□□ -1.16
PTPN9-204ENST00000564970 HSP90AB1P08238 724 aaKnown RBP7.81□□□□□ -1.16
PTPN9-204ENST00000564970 RRP1P56182 461 aaKnown RBP7.81□□□□□ -1.16
PTPN9-204ENST00000564970 KNSTRNQ9Y448 316 aa7.81□□□□□ -1.16
PTPN9-204ENST00000564970 ZMYM4Q5VZL5 1548 aa7.81□□□□□ -1.16
PTPN9-204ENST00000564970 ABCA5Q8WWZ7 1642 aa7.81□□□□□ -1.16
PTPN9-204ENST00000564970 KIF3CO14782 793 aa7.8□□□□□ -1.16
PTPN9-204ENST00000564970 TRAK2O60296 914 aa7.8□□□□□ -1.16
PTPN9-204ENST00000564970 KCNJ4P48050 445 aa7.8□□□□□ -1.16
PTPN9-204ENST00000564970 BRPF1P55201 1214 aaPredicted RBP7.8□□□□□ -1.16
PTPN9-204ENST00000564970 ZNF771Q7L3S4 317 aaPredicted RBP7.8□□□□□ -1.16
PTPN9-204ENST00000564970 BANK1Q8NDB2 785 aa7.8□□□□□ -1.16
PTPN9-204ENST00000564970 ZNF592Q92610 1267 aa7.8□□□□□ -1.16
PTPN9-204ENST00000564970 UPF2Q9HAU5 1272 aaKnown RBP7.8□□□□□ -1.16
PTPN9-204ENST00000564970 SMC4Q9NTJ3 1288 aa7.8□□□□□ -1.16
PTPN9-204ENST00000564970 CHMP5Q9NZZ3 219 aa7.8□□□□□ -1.16
PTPN9-204ENST00000564970 CIZ1Q9ULV3 898 aaPredicted RBP7.8□□□□□ -1.16
PTPN9-204ENST00000564970 R3HCC1Q9Y3T6 440 aaKnown RBP7.8□□□□□ -1.16
PTPN9-204ENST00000564970 VIRMAQ69YN4 1812 aaKnown RBP7.8□□□□□ -1.16
PTPN9-204ENST00000564970 CCDC172P0C7W6 258 aa7.79□□□□□ -1.16
PTPN9-204ENST00000564970 NEFHP12036 1026 aa7.79□□□□□ -1.16
PTPN9-204ENST00000564970 MAP2K1Q02750 393 aaPredicted RBP7.79□□□□□ -1.16
PTPN9-204ENST00000564970 TRDNQ13061 729 aa7.79□□□□□ -1.16
PTPN9-204ENST00000564970 ZKSCAN8Q15776 578 aaPredicted RBP7.79□□□□□ -1.16
PTPN9-204ENST00000564970 SLC26A8Q96RN1 970 aa7.79□□□□□ -1.16
PTPN9-204ENST00000564970 ANTXR1Q9H6X2 564 aa7.79□□□□□ -1.16
PTPN9-204ENST00000564970 SLC52A1Q9NWF4 448 aa7.79□□□□□ -1.16
PTPN9-204ENST00000564970 TERF2IPQ9NYB0 399 aa7.79□□□□□ -1.16
PTPN9-204ENST00000564970 CADPSQ9ULU8 1353 aa7.79□□□□□ -1.16
PTPN9-204ENST00000564970 GOLGA6L6A8MZA4 724 aa7.78□□□□□ -1.16
PTPN9-204ENST00000564970 GOLGA6L22H0YM25 854 aa7.78□□□□□ -1.16
PTPN9-204ENST00000564970 MYCNP04198 464 aaPredicted RBP7.78□□□□□ -1.16
PTPN9-204ENST00000564970 TNNT3P45378 269 aaPredicted RBP7.78□□□□□ -1.16
PTPN9-204ENST00000564970 NBPF10Q6P3W6 841 aaKnown RBP7.78□□□□□ -1.16
PTPN9-204ENST00000564970 GPATCH11Q8N954 259 aa7.78□□□□□ -1.16
PTPN9-204ENST00000564970 TACO1Q9BSH4 297 aaKnown RBP7.78□□□□□ -1.16
PTPN9-204ENST00000564970 PANK2Q9BZ23 570 aa7.78□□□□□ -1.16
PTPN9-204ENST00000564970 PRDM10Q9NQV6 1147 aa7.78□□□□□ -1.16
PTPN9-204ENST00000564970 CCDC39Q9UFE4 941 aa7.78□□□□□ -1.16
PTPN9-204ENST00000564970 ZKSCAN5Q9Y2L8 839 aa7.78□□□□□ -1.16
PTPN9-204ENST00000564970 CCNB3Q8WWL7 1395 aa7.78□□□□□ -1.16
PTPN9-204ENST00000564970 UHRF1BP1LA0JNW5 1464 aa7.78□□□□□ -1.16
PTPN9-204ENST00000564970 AKNAQ7Z591 1439 aa7.78□□□□□ -1.16
PTPN9-204ENST00000564970 SETD5Q9C0A6 1442 aa7.78□□□□□ -1.16
PTPN9-204ENST00000564970 ROCK2O75116 1388 aaKnown RBP7.77□□□□□ -1.17
PTPN9-204ENST00000564970 NRDCO43847 1150 aa7.77□□□□□ -1.17
PTPN9-204ENST00000564970 NBPF6Q5VWK0 638 aa7.77□□□□□ -1.17
PTPN9-204ENST00000564970 NBPF5PQ86XG9 351 aaPredicted RBP7.77□□□□□ -1.17
PTPN9-204ENST00000564970 GOLGA6L1Q8N7Z2 621 aa7.77□□□□□ -1.17
PTPN9-204ENST00000564970 NBPF4Q96M43 638 aa7.77□□□□□ -1.17
PTPN9-204ENST00000564970 FAM210AQ96ND0 272 aa7.77□□□□□ -1.17
PTPN9-204ENST00000564970 GBP4Q96PP9 640 aa7.77□□□□□ -1.17
PTPN9-204ENST00000564970 PRKRIP1Q9H875 184 aaPredicted RBP7.77□□□□□ -1.17
PTPN9-204ENST00000564970 KIF16BQ96L93 1317 aa7.77□□□□□ -1.17
PTPN9-204ENST00000564970 NASPP49321 788 aaPredicted RBP7.76□□□□□ -1.17
PTPN9-204ENST00000564970 PDLIM2Q96JY6 352 aa7.76□□□□□ -1.17
PTPN9-204ENST00000564970 MRS2Q9HD23 443 aa7.76□□□□□ -1.17
PTPN9-204ENST00000564970 MED4Q9NPJ6 270 aa7.76□□□□□ -1.17
PTPN9-204ENST00000564970 DIAPH3Q9NSV4 1193 aa7.76□□□□□ -1.17
PTPN9-204ENST00000564970 DONSONQ9NYP3 566 aa7.76□□□□□ -1.17
PTPN9-204ENST00000564970 SMARCA4P51532 1647 aa7.76□□□□□ -1.17
PTPN9-204ENST00000564970 ARHGAP31Q2M1Z3 1444 aa7.76□□□□□ -1.17
PTPN9-204ENST00000564970 DISP3Q9P2K9 1392 aa7.75□□□□□ -1.17
PTPN9-204ENST00000564970 MAP3K1Q13233 1512 aa7.75□□□□□ -1.17
PTPN9-204ENST00000564970 ZNF608Q9ULD9 1512 aaPredicted RBP7.75□□□□□ -1.17
PTPN9-204ENST00000564970 GTF2A1P52655 376 aaPredicted RBP7.75□□□□□ -1.17
PTPN9-204ENST00000564970 ANAPC15P60006 121 aa7.75□□□□□ -1.17
PTPN9-204ENST00000564970 SETDB1Q15047 1291 aa7.75□□□□□ -1.17
PTPN9-204ENST00000564970 OTUD6BQ8N6M0 293 aa7.75□□□□□ -1.17
PTPN9-204ENST00000564970 TMC1Q8TDI8 760 aa7.75□□□□□ -1.17
PTPN9-204ENST00000564970 SLKQ9H2G2 1235 aaPredicted RBP7.75□□□□□ -1.17
PTPN9-204ENST00000564970 MYOM3Q5VTT5 1437 aa7.75□□□□□ -1.17
PTPN9-204ENST00000564970 MAPK8IP3Q9UPT6 1336 aa7.75□□□□□ -1.17
PTPN9-204ENST00000564970 PLEKHH2Q8IVE3 1493 aa7.75□□□□□ -1.17
PTPN9-204ENST00000564970 HSPA5P11021 654 aaKnown RBP7.74□□□□□ -1.17
PTPN9-204ENST00000564970 LIG1P18858 919 aa7.74□□□□□ -1.17
PTPN9-204ENST00000564970 C8orf34Q49A92 452 aa7.74□□□□□ -1.17
PTPN9-204ENST00000564970 ICE2Q659A1 982 aa7.74□□□□□ -1.17
PTPN9-204ENST00000564970 YEATS2Q9ULM3 1422 aa7.74□□□□□ -1.17
PTPN9-204ENST00000564970 EIF3AQ14152 1382 aaKnown RBP7.73□□□□□ -1.17
PTPN9-204ENST00000564970 TONSLQ96HA7 1378 aa7.73□□□□□ -1.17
PTPN9-204ENST00000564970 RAB3GAP2Q9H2M9 1393 aa7.73□□□□□ -1.17
PTPN9-204ENST00000564970 TRIM6-TRIM34B2RNG4 842 aa7.73□□□□□ -1.17
PTPN9-204ENST00000564970 GOLIM4O00461 696 aa7.73□□□□□ -1.17
PTPN9-204ENST00000564970 GUCY2CP25092 1073 aa7.73□□□□□ -1.17
PTPN9-204ENST00000564970 KIAA2012Q0VF49 1180 aa7.73□□□□□ -1.17
PTPN9-204ENST00000564970 CHAF1AQ13111 956 aaPredicted RBP7.73□□□□□ -1.17
PTPN9-204ENST00000564970 TRIM34Q9BYJ4 488 aa7.73□□□□□ -1.17
PTPN9-204ENST00000564970 NBPF3Q9H094 633 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms