RNA–Protein interactions for RNA: ENST00000564850.1

RBFOX1-216, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 293 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-216ENST00000564850 NBR1Q14596 966 aa9.57□□□□□ -0.88
RBFOX1-216ENST00000564850 NKX1-1Q15270 411 aaPredicted RBP9.57□□□□□ -0.88
RBFOX1-216ENST00000564850 LCE2CQ5TA81 110 aa9.57□□□□□ -0.88
RBFOX1-216ENST00000564850 PPEF1O14829 653 aaPredicted RBP9.56□□□□□ -0.88
RBFOX1-216ENST00000564850 PCDHB3Q9Y5E6 796 aa9.56□□□□□ -0.88
RBFOX1-216ENST00000564850 TERTO14746 1132 aaKnown RBP9.55□□□□□ -0.88
RBFOX1-216ENST00000564850 SLF2Q8IX21 1173 aa9.55□□□□□ -0.88
RBFOX1-216ENST00000564850 DPYSL4O14531 572 aa9.54□□□□□ -0.88
RBFOX1-216ENST00000564850 TLL1O43897 1013 aa9.54□□□□□ -0.88
RBFOX1-216ENST00000564850 S1PR4O95977 384 aa9.53□□□□□ -0.88
RBFOX1-216ENST00000564850 AVPP01185 164 aa9.53□□□□□ -0.88
RBFOX1-216ENST00000564850 FOXC1Q12948 553 aa9.53□□□□□ -0.88
RBFOX1-216ENST00000564850 CTC1Q2NKJ3 1217 aa9.53□□□□□ -0.88
RBFOX1-216ENST00000564850 LMOD2Q6P5Q4 547 aa9.53□□□□□ -0.88
RBFOX1-216ENST00000564850 PRR14Q9BWN1 585 aa9.53□□□□□ -0.88
RBFOX1-216ENST00000564850 SLC4A3P48751 1232 aa9.52□□□□□ -0.89
RBFOX1-216ENST00000564850 BLOC1S3Q6QNY0 202 aa9.52□□□□□ -0.89
RBFOX1-216ENST00000564850 NUDT18Q6ZVK8 323 aa9.52□□□□□ -0.89
RBFOX1-216ENST00000564850 CERKQ8TCT0 537 aa9.52□□□□□ -0.89
RBFOX1-216ENST00000564850 SWT1Q5T5J6 900 aaKnown RBP9.5□□□□□ -0.89
RBFOX1-216ENST00000564850 DNAJC5Q9H3Z4 198 aa9.5□□□□□ -0.89
RBFOX1-216ENST00000564850 PKD2L1Q9P0L9 805 aa9.5□□□□□ -0.89
RBFOX1-216ENST00000564850 SMCPP49901 116 aaPredicted RBP9.47□□□□□ -0.89
RBFOX1-216ENST00000564850 ZSCAN1Q8NBB4 408 aa9.47□□□□□ -0.89
RBFOX1-216ENST00000564850 SNRPBP14678 240 aaKnown RBP9.45□□□□□ -0.9
RBFOX1-216ENST00000564850 PLA2G2CQ5R387 149 aa9.44□□□□□ -0.9
RBFOX1-216ENST00000564850 CYP4X1Q8N118 509 aa9.44□□□□□ -0.9
RBFOX1-216ENST00000564850 TOR4AQ9NXH8 423 aa9.43□□□□□ -0.9
RBFOX1-216ENST00000564850 CAMK2BQ13554 666 aa9.42□□□□□ -0.9
RBFOX1-216ENST00000564850 ADH1BP00325 375 aa9.41□□□□□ -0.9
RBFOX1-216ENST00000564850 SLC16A10Q8TF71 515 aa9.41□□□□□ -0.9
RBFOX1-216ENST00000564850 SENP2Q9HC62 589 aa9.41□□□□□ -0.9
RBFOX1-216ENST00000564850 TRIM47Q96LD4 638 aa9.4□□□□□ -0.9
RBFOX1-216ENST00000564850 ATP13A2Q9NQ11 1180 aa9.4□□□□□ -0.9
RBFOX1-216ENST00000564850 RBM27Q9P2N5 1060 aaKnown RBP9.4□□□□□ -0.9
RBFOX1-216ENST00000564850 SLC6A16Q9GZN6 736 aa9.38□□□□□ -0.91
RBFOX1-216ENST00000564850 LORP23490 312 aaPredicted RBP9.37□□□□□ -0.91
RBFOX1-216ENST00000564850 GMPRP36959 345 aa9.37□□□□□ -0.91
RBFOX1-216ENST00000564850 TTC24A2A3L6 582 aaPredicted RBP9.34□□□□□ -0.91
RBFOX1-216ENST00000564850 GTPBP6O43824 516 aaPredicted RBP9.34□□□□□ -0.91
RBFOX1-216ENST00000564850 RPIAP49247 311 aa9.33□□□□□ -0.92
RBFOX1-216ENST00000564850 KIFC2Q96AC6 838 aa9.33□□□□□ -0.92
RBFOX1-216ENST00000564850 PDIA6Q15084 440 aa9.32□□□□□ -0.92
RBFOX1-216ENST00000564850 KMT5BQ4FZB7 885 aa9.32□□□□□ -0.92
RBFOX1-216ENST00000564850 CDHR5Q9HBB8 845 aa9.32□□□□□ -0.92
RBFOX1-216ENST00000564850 CD2BP2O95400 341 aaKnown RBP9.31□□□□□ -0.92
RBFOX1-216ENST00000564850 PRIM1P49642 420 aaKnown RBP9.31□□□□□ -0.92
RBFOX1-216ENST00000564850 KCTD17Q8N5Z5 321 aa9.31□□□□□ -0.92
RBFOX1-216ENST00000564850 IRF7Q92985 503 aa9.31□□□□□ -0.92
RBFOX1-216ENST00000564850 ACTN4O43707 911 aaKnown RBP9.3□□□□□ -0.92
RBFOX1-216ENST00000564850 NR1I2O75469 434 aa9.3□□□□□ -0.92
RBFOX1-216ENST00000564850 CADPS2Q86UW7 1296 aa9.3□□□□□ -0.92
RBFOX1-216ENST00000564850 NXF1Q9UBU9 619 aaKnown RBP9.29□□□□□ -0.92
RBFOX1-216ENST00000564850 SPDYE16A6NNV3 312 aaPredicted RBP9.28□□□□□ -0.92
RBFOX1-216ENST00000564850 PADI6Q6TGC4 694 aa9.28□□□□□ -0.92
RBFOX1-216ENST00000564850 TTC13Q8NBP0 860 aa9.27□□□□□ -0.93
RBFOX1-216ENST00000564850 GRXCR2A6NFK2 248 aa9.26□□□□□ -0.93
RBFOX1-216ENST00000564850 EYA1Q99502 592 aa9.25□□□□□ -0.93
RBFOX1-216ENST00000564850 CFHP08603 1231 aa9.24□□□□□ -0.93
RBFOX1-216ENST00000564850 SMPD1P17405 629 aa9.24□□□□□ -0.93
RBFOX1-216ENST00000564850 KCNMA1Q12791 1236 aa9.23□□□□□ -0.93
RBFOX1-216ENST00000564850 NPAS3Q8IXF0 933 aa9.23□□□□□ -0.93
RBFOX1-216ENST00000564850 SNIP1Q8TAD8 396 aaKnown RBP9.21□□□□□ -0.94
RBFOX1-216ENST00000564850 SPSB2Q99619 263 aa9.21□□□□□ -0.94
RBFOX1-216ENST00000564850 FCF1Q9Y324 198 aaKnown RBP9.21□□□□□ -0.94
RBFOX1-216ENST00000564850 DNAJB2P25686 324 aa9.19□□□□□ -0.94
RBFOX1-216ENST00000564850 VEGFBP49765 207 aa9.19□□□□□ -0.94
RBFOX1-216ENST00000564850 SCUBE3Q8IX30 993 aa9.18□□□□□ -0.94
RBFOX1-216ENST00000564850 H3BM21 787 aa9.17□□□□□ -0.94
RBFOX1-216ENST00000564850 ERBB4Q15303 1308 aa9.16□□□□□ -0.94
RBFOX1-216ENST00000564850 OSBPP22059 807 aa9.16□□□□□ -0.94
RBFOX1-216ENST00000564850 TMEM151AQ8N4L1 468 aa9.16□□□□□ -0.94
RBFOX1-216ENST00000564850 J3QL48 77 aa9.15□□□□□ -0.94
RBFOX1-216ENST00000564850 WNT7AO00755 349 aa9.15□□□□□ -0.94
RBFOX1-216ENST00000564850 ZBTB24O43167 697 aaPredicted RBP9.15□□□□□ -0.94
RBFOX1-216ENST00000564850 HPS1Q92902 700 aa9.15□□□□□ -0.94
RBFOX1-216ENST00000564850 GSK3AP49840 483 aa9.14□□□□□ -0.95
RBFOX1-216ENST00000564850 XP32Q5T750 250 aa9.14□□□□□ -0.95
RBFOX1-216ENST00000564850 TMEM134Q9H6X4 195 aa9.14□□□□□ -0.95
RBFOX1-216ENST00000564850 NPDC1Q9NQX5 325 aaPredicted RBP9.13□□□□□ -0.95
RBFOX1-216ENST00000564850 GDF11O95390 407 aa9.12□□□□□ -0.95
RBFOX1-216ENST00000564850 PUS10Q3MIT2 529 aaKnown RBP9.1□□□□□ -0.95
RBFOX1-216ENST00000564850 RBM46Q8TBY0 533 aaKnown RBP9.09□□□□□ -0.95
RBFOX1-216ENST00000564850 MRGPRX2Q96LB1 330 aa9.09□□□□□ -0.95
RBFOX1-216ENST00000564850 SLC10A3P09131 477 aa9.08□□□□□ -0.96
RBFOX1-216ENST00000564850 RASSF7Q02833 373 aa9.08□□□□□ -0.96
RBFOX1-216ENST00000564850 RNF225M0QZC1 329 aaPredicted RBP9.05□□□□□ -0.96
RBFOX1-216ENST00000564850 REPIN1Q9BWE0 567 aaKnown RBP9.05□□□□□ -0.96
RBFOX1-216ENST00000564850 RCCD1A6NED2 376 aa9.04□□□□□ -0.96
RBFOX1-216ENST00000564850 BMP1P13497 986 aa9.04□□□□□ -0.96
RBFOX1-216ENST00000564850 KRTAP4-8Q9BYQ9 185 aa9.04□□□□□ -0.96
RBFOX1-216ENST00000564850 TRIM32Q13049 653 aa9.03□□□□□ -0.96
RBFOX1-216ENST00000564850 GPAT2Q6NUI2 795 aa9.01□□□□□ -0.97
RBFOX1-216ENST00000564850 FAM160A2Q8N612 972 aaPredicted RBP9.01□□□□□ -0.97
RBFOX1-216ENST00000564850 PRDM9Q9NQV7 894 aa9.01□□□□□ -0.97
RBFOX1-216ENST00000564850 FMNL1O95466 1100 aaPredicted RBP9□□□□□ -0.97
RBFOX1-216ENST00000564850 TRIM46Q7Z4K8 759 aa9□□□□□ -0.97
RBFOX1-216ENST00000564850 RSPH4AQ5TD94 716 aa8.99□□□□□ -0.97
RBFOX1-216ENST00000564850 THAP11Q96EK4 314 aa8.99□□□□□ -0.97
RBFOX1-216ENST00000564850 ADGRG1Q9Y653 693 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms