RNA–Protein interactions for RNA: ENST00000564511.1

TUBGCP4-209, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-209ENST00000564511 DDX12PQ92771 950 aa9.24□□□□□ -0.93
TUBGCP4-209ENST00000564511 EPAS1Q99814 870 aa9.24□□□□□ -0.93
TUBGCP4-209ENST00000564511 C6orf132Q5T0Z8 1188 aa9.23□□□□□ -0.93
TUBGCP4-209ENST00000564511 WDR70Q9NW82 654 aa9.23□□□□□ -0.93
TUBGCP4-209ENST00000564511 TTBK1Q5TCY1 1321 aaPredicted RBP9.23□□□□□ -0.93
TUBGCP4-209ENST00000564511 TOP2BQ02880 1626 aa9.23□□□□□ -0.93
TUBGCP4-209ENST00000564511 PDIA6Q15084 440 aa9.22□□□□□ -0.93
TUBGCP4-209ENST00000564511 PROX2Q3B8N5 592 aa9.22□□□□□ -0.93
TUBGCP4-209ENST00000564511 ADCY10Q96PN6 1610 aa9.22□□□□□ -0.93
TUBGCP4-209ENST00000564511 TSPOAP1O95153 1857 aa9.21□□□□□ -0.94
TUBGCP4-209ENST00000564511 BIVM-ERCC5R4GMW8 1640 aa9.2□□□□□ -0.94
TUBGCP4-209ENST00000564511 SPDYE16A6NNV3 312 aaPredicted RBP9.2□□□□□ -0.94
TUBGCP4-209ENST00000564511 MRPL50Q8N5N7 158 aaKnown RBP9.2□□□□□ -0.94
TUBGCP4-209ENST00000564511 RBM33Q96EV2 1170 aaKnown RBP9.2□□□□□ -0.94
TUBGCP4-209ENST00000564511 ARIH1Q9Y4X5 557 aaPredicted RBP9.2□□□□□ -0.94
TUBGCP4-209ENST00000564511 RUSC2Q8N2Y8 1516 aa9.2□□□□□ -0.94
TUBGCP4-209ENST00000564511 RABGEF1Q9UJ41 708 aa9.19□□□□□ -0.94
TUBGCP4-209ENST00000564511 ADGRL1O94910 1474 aa9.18□□□□□ -0.94
TUBGCP4-209ENST00000564511 PTPRGP23470 1445 aa9.18□□□□□ -0.94
TUBGCP4-209ENST00000564511 PTPN5P54829 565 aa9.18□□□□□ -0.94
TUBGCP4-209ENST00000564511 NBPF3Q9H094 633 aa9.18□□□□□ -0.94
TUBGCP4-209ENST00000564511 TSHZ2Q9NRE2 1034 aa9.18□□□□□ -0.94
TUBGCP4-209ENST00000564511 KIAA0586Q9BVV6 1533 aa9.17□□□□□ -0.94
TUBGCP4-209ENST00000564511 GOLGA8CPA6NN73 597 aa9.17□□□□□ -0.94
TUBGCP4-209ENST00000564511 NBR1Q14596 966 aa9.17□□□□□ -0.94
TUBGCP4-209ENST00000564511 PLA2G2EQ9NZK7 142 aa9.17□□□□□ -0.94
TUBGCP4-209ENST00000564511 THSD4Q6ZMP0 1018 aa9.16□□□□□ -0.94
TUBGCP4-209ENST00000564511 WNT2BQ93097 391 aa9.16□□□□□ -0.94
TUBGCP4-209ENST00000564511 KIAA1468Q9P260 1216 aa9.16□□□□□ -0.94
TUBGCP4-209ENST00000564511 ONECUT3O60422 494 aaPredicted RBP9.15□□□□□ -0.94
TUBGCP4-209ENST00000564511 EN1Q05925 392 aaPredicted RBP9.15□□□□□ -0.94
TUBGCP4-209ENST00000564511 PRIM1P49642 420 aaKnown RBP9.14□□□□□ -0.95
TUBGCP4-209ENST00000564511 TSR1Q2NL82 804 aaKnown RBP9.14□□□□□ -0.95
TUBGCP4-209ENST00000564511 ASXL2Q76L83 1435 aa9.14□□□□□ -0.95
TUBGCP4-209ENST00000564511 IGF1RP08069 1367 aa9.13□□□□□ -0.95
TUBGCP4-209ENST00000564511 MAP3K7O43318 606 aa9.13□□□□□ -0.95
TUBGCP4-209ENST00000564511 PLB1Q6P1J6 1458 aa9.13□□□□□ -0.95
TUBGCP4-209ENST00000564511 ABCC2Q92887 1545 aa9.12□□□□□ -0.95
TUBGCP4-209ENST00000564511 GRXCR2A6NFK2 248 aa9.12□□□□□ -0.95
TUBGCP4-209ENST00000564511 TRIM6-TRIM34B2RNG4 842 aa9.12□□□□□ -0.95
TUBGCP4-209ENST00000564511 COL17A1Q9UMD9 1497 aaPredicted RBP9.12□□□□□ -0.95
TUBGCP4-209ENST00000564511 CARMIL2Q6F5E8 1435 aa9.12□□□□□ -0.95
TUBGCP4-209ENST00000564511 TNIKQ9UKE5 1360 aa9.12□□□□□ -0.95
TUBGCP4-209ENST00000564511 LAPTM4BQ86VI4 370 aa9.11□□□□□ -0.95
TUBGCP4-209ENST00000564511 GLI2P10070 1586 aa9.1□□□□□ -0.95
TUBGCP4-209ENST00000564511 KIF27Q86VH2 1401 aa9.09□□□□□ -0.95
TUBGCP4-209ENST00000564511 OSBPP22059 807 aa9.09□□□□□ -0.95
TUBGCP4-209ENST00000564511 SEPT9Q9UHD8 586 aaPredicted RBP9.09□□□□□ -0.95
TUBGCP4-209ENST00000564511 PPRC1Q5VV67 1664 aaKnown RBP9.08□□□□□ -0.96
TUBGCP4-209ENST00000564511 ANKK1Q8NFD2 765 aa9.08□□□□□ -0.96
TUBGCP4-209ENST00000564511 ZFRQ96KR1 1074 aaKnown RBP9.08□□□□□ -0.96
TUBGCP4-209ENST00000564511 TSKSQ9UJT2 592 aa9.08□□□□□ -0.96
TUBGCP4-209ENST00000564511 UACAQ9BZF9 1416 aa9.07□□□□□ -0.96
TUBGCP4-209ENST00000564511 EPRSP07814 1512 aaKnown RBP9.07□□□□□ -0.96
TUBGCP4-209ENST00000564511 CARMIL1Q5VZK9 1371 aa9.07□□□□□ -0.96
TUBGCP4-209ENST00000564511 TEX14Q8IWB6 1497 aa9.07□□□□□ -0.96
TUBGCP4-209ENST00000564511 BCAMP50895 628 aa9.06□□□□□ -0.96
TUBGCP4-209ENST00000564511 UHRF1BP1LA0JNW5 1464 aa9.06□□□□□ -0.96
TUBGCP4-209ENST00000564511 CUL7Q14999 1698 aa9.05□□□□□ -0.96
TUBGCP4-209ENST00000564511 SOWAHBA6NEL2 793 aa9.05□□□□□ -0.96
TUBGCP4-209ENST00000564511 CDCA7LQ96GN5 454 aa9.05□□□□□ -0.96
TUBGCP4-209ENST00000564511 FAM198AQ9UFP1 575 aa9.05□□□□□ -0.96
TUBGCP4-209ENST00000564511 PRSS12P56730 875 aa9.04□□□□□ -0.96
TUBGCP4-209ENST00000564511 FAM98CQ17RN3 349 aaKnown RBP9.04□□□□□ -0.96
TUBGCP4-209ENST00000564511 PACS2Q86VP3 889 aa9.04□□□□□ -0.96
TUBGCP4-209ENST00000564511 KCNV2Q8TDN2 545 aa9.04□□□□□ -0.96
TUBGCP4-209ENST00000564511 ARHGEF1Q92888 912 aaKnown RBP9.04□□□□□ -0.96
TUBGCP4-209ENST00000564511 CDHR5Q9HBB8 845 aa9.04□□□□□ -0.96
TUBGCP4-209ENST00000564511 CERKQ8TCT0 537 aa9.03□□□□□ -0.96
TUBGCP4-209ENST00000564511 KDM5BQ9UGL1 1544 aa9.03□□□□□ -0.96
TUBGCP4-209ENST00000564511 IQGAP2Q13576 1575 aa9.03□□□□□ -0.96
TUBGCP4-209ENST00000564511 MAP3K4Q9Y6R4 1608 aa9.02□□□□□ -0.96
TUBGCP4-209ENST00000564511 C3orf80F5H4A9 247 aa9.02□□□□□ -0.97
TUBGCP4-209ENST00000564511 DISP1Q96F81 1524 aa9.01□□□□□ -0.97
TUBGCP4-209ENST00000564511 SMAPO00193 183 aa9.01□□□□□ -0.97
TUBGCP4-209ENST00000564511 IFFO2Q5TF58 517 aa9.01□□□□□ -0.97
TUBGCP4-209ENST00000564511 CD109Q6YHK3 1445 aa9□□□□□ -0.97
TUBGCP4-209ENST00000564511 MLLT3P42568 568 aaPredicted RBP9□□□□□ -0.97
TUBGCP4-209ENST00000564511 WBP1LQ9NX94 342 aa9□□□□□ -0.97
TUBGCP4-209ENST00000564511 ZCCHC11Q5TAX3 1644 aaKnown RBP8.99□□□□□ -0.97
TUBGCP4-209ENST00000564511 NPDC1Q9NQX5 325 aaPredicted RBP8.99□□□□□ -0.97
TUBGCP4-209ENST00000564511 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.99□□□□□ -0.97
TUBGCP4-209ENST00000564511 WDR7Q9Y4E6 1490 aa8.99□□□□□ -0.97
TUBGCP4-209ENST00000564511 TATDN2Q93075 761 aa8.98□□□□□ -0.97
TUBGCP4-209ENST00000564511 PLCB2Q00722 1185 aa8.97□□□□□ -0.97
TUBGCP4-209ENST00000564511 LRCH3Q96II8 777 aa8.97□□□□□ -0.97
TUBGCP4-209ENST00000564511 TSR3Q9UJK0 312 aaKnown RBP8.97□□□□□ -0.97
TUBGCP4-209ENST00000564511 MAGI3Q5TCQ9 1506 aa8.96□□□□□ -0.97
TUBGCP4-209ENST00000564511 NYAP1Q6ZVC0 841 aa8.96□□□□□ -0.98
TUBGCP4-209ENST00000564511 TTC13Q8NBP0 860 aa8.96□□□□□ -0.98
TUBGCP4-209ENST00000564511 PNMA3Q9UL41 463 aa8.96□□□□□ -0.98
TUBGCP4-209ENST00000564511 HPS5Q9UPZ3 1129 aa8.96□□□□□ -0.98
TUBGCP4-209ENST00000564511 NUDT18Q6ZVK8 323 aa8.95□□□□□ -0.98
TUBGCP4-209ENST00000564511 SAMD7Q7Z3H4 446 aa8.95□□□□□ -0.98
TUBGCP4-209ENST00000564511 RBM27Q9P2N5 1060 aaKnown RBP8.95□□□□□ -0.98
TUBGCP4-209ENST00000564511 UGGT2Q9NYU1 1516 aa8.95□□□□□ -0.98
TUBGCP4-209ENST00000564511 NBPF26B4DH59 902 aa8.94□□□□□ -0.98
TUBGCP4-209ENST00000564511 ITGBL1O95965 494 aaPredicted RBP8.94□□□□□ -0.98
TUBGCP4-209ENST00000564511 PTPRMP28827 1452 aa8.94□□□□□ -0.98
TUBGCP4-209ENST00000564511 KIF21BO75037 1637 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms