RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 AFF2P51816 1311 aa28.87■■■□□ 2.21
E4F1-203ENST00000563643 ERBINQ96RT1 1412 aa28.86■■■□□ 2.21
E4F1-203ENST00000563643 NUTM2BA6NNL0 878 aaPredicted RBP28.86■■■□□ 2.21
E4F1-203ENST00000563643 NUTM2EB1AL46 878 aaPredicted RBP28.86■■■□□ 2.21
E4F1-203ENST00000563643 NUTM2AQ8IVF1 878 aaPredicted RBP28.86■■■□□ 2.21
E4F1-203ENST00000563643 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.86■■■□□ 2.214e-8■■□□□ 14.5
E4F1-203ENST00000563643 KIF15Q9NS87 1388 aa28.86■■■□□ 2.21
E4F1-203ENST00000563643 NCOA3Q9Y6Q9 1424 aa28.86■■■□□ 2.21
E4F1-203ENST00000563643 DIP2AQ14689 1571 aa28.84■■■□□ 2.21
E4F1-203ENST00000563643 C14orf37Q86TY3 774 aa28.83■■■□□ 2.21
E4F1-203ENST00000563643 CHD2O14647 1828 aaKnown RBP28.83■■■□□ 2.21
E4F1-203ENST00000563643 KANK1Q14678 1352 aa28.82■■■□□ 2.2
E4F1-203ENST00000563643 CADPS2Q86UW7 1296 aa28.81■■■□□ 2.2
E4F1-203ENST00000563643 PLEKHG1Q9ULL1 1385 aa28.8■■■□□ 2.2
E4F1-203ENST00000563643 LMTK2Q8IWU2 1503 aa28.79■■■□□ 2.2
E4F1-203ENST00000563643 NOS1P29475 1434 aa28.78■■■□□ 2.2
E4F1-203ENST00000563643 MYOM3Q5VTT5 1437 aa28.77■■■□□ 2.2
E4F1-203ENST00000563643 ATF3P18847 181 aa28.77■■■□□ 2.2
E4F1-203ENST00000563643 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.77■■■□□ 2.2
E4F1-203ENST00000563643 ZFYVE9O95405 1425 aa28.77■■■□□ 2.2
E4F1-203ENST00000563643 RBM6P78332 1123 aaKnown RBP28.76■■■□□ 2.19
E4F1-203ENST00000563643 NUTM2DQ5VT03 806 aaPredicted RBP28.76■■■□□ 2.19
E4F1-203ENST00000563643 C19orf44Q9H6X5 657 aa28.76■■■□□ 2.19
E4F1-203ENST00000563643 BRINP3Q76B58 766 aa28.75■■■□□ 2.19
E4F1-203ENST00000563643 RRP7BPQ9NSQ0 103 aa28.75■■■□□ 2.19
E4F1-203ENST00000563643 PPP1R15AO75807 674 aaPredicted RBP28.73■■■□□ 2.19
E4F1-203ENST00000563643 QTRT2Q9H974 415 aaKnown RBP28.73■■■□□ 2.19
E4F1-203ENST00000563643 SLC52A1Q9NWF4 448 aa28.73■■■□□ 2.19
E4F1-203ENST00000563643 ZRANB1Q9UGI0 708 aa28.72■■■□□ 2.19
E4F1-203ENST00000563643 C8orf37Q96NL8 207 aa28.71■■■□□ 2.19
E4F1-203ENST00000563643 TBX22Q9Y458 520 aa28.7■■■□□ 2.18
E4F1-203ENST00000563643 ATAD2Q6PL18 1390 aa28.7■■■□□ 2.18
E4F1-203ENST00000563643 SETD5Q9C0A6 1442 aa28.69■■■□□ 2.18
E4F1-203ENST00000563643 FOXD1Q16676 465 aa28.69■■■□□ 2.18
E4F1-203ENST00000563643 RIMS2Q9UQ26 1411 aa28.69■■■□□ 2.18
E4F1-203ENST00000563643 SETBP1Q9Y6X0 1596 aa28.67■■■□□ 2.18
E4F1-203ENST00000563643 ASXL1Q8IXJ9 1541 aa28.66■■■□□ 2.18
E4F1-203ENST00000563643 CROCC2H7BZ55 1655 aa28.66■■■□□ 2.18
E4F1-203ENST00000563643 ABCC5O15440 1437 aa28.65■■■□□ 2.18
E4F1-203ENST00000563643 HDGFP51858 240 aaKnown RBP28.64■■■□□ 2.18
E4F1-203ENST00000563643 EP400Q96L91 3159 aa28.63■■■□□ 2.17
E4F1-203ENST00000563643 ADAMTS13Q76LX8 1427 aa28.62■■■□□ 2.17
E4F1-203ENST00000563643 NGLY1Q96IV0 654 aa28.62■■■□□ 2.17
E4F1-203ENST00000563643 PIK3R4Q99570 1358 aa28.61■■■□□ 2.17
E4F1-203ENST00000563643 DCCP43146 1447 aa28.6■■■□□ 2.17
E4F1-203ENST00000563643 LRRC59Q96AG4 307 aaKnown RBP28.6■■■□□ 2.17
E4F1-203ENST00000563643 PNPLA6Q8IY17 1366 aa28.59■■■□□ 2.17
E4F1-203ENST00000563643 NHSL1Q5SYE7 1610 aa28.58■■■□□ 2.17
E4F1-203ENST00000563643 MYO5BQ9ULV0 1848 aa28.58■■■□□ 2.17
E4F1-203ENST00000563643 GCC2Q8IWJ2 1684 aa28.58■■■□□ 2.16
E4F1-203ENST00000563643 TMEM131LA2VDJ0 1609 aa28.56■■■□□ 2.16
E4F1-203ENST00000563643 RPRD2Q5VT52 1461 aaKnown RBP28.56■■■□□ 2.16
E4F1-203ENST00000563643 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.55■■■□□ 2.16
E4F1-203ENST00000563643 MST1RQ04912 1400 aa28.54■■■□□ 2.16
E4F1-203ENST00000563643 KANK4Q5T7N3 995 aaPredicted RBP28.54■■■□□ 2.16
E4F1-203ENST00000563643 DAPK1P53355 1430 aa28.53■■■□□ 2.16
E4F1-203ENST00000563643 AMOTL2Q9Y2J4 779 aa28.52■■■□□ 2.16
E4F1-203ENST00000563643 ADAMTS2O95450 1211 aa28.51■■■□□ 2.15
E4F1-203ENST00000563643 PTPRUQ92729 1446 aa28.51■■■□□ 2.15
E4F1-203ENST00000563643 TRPM2O94759 1503 aa28.5■■■□□ 2.15
E4F1-203ENST00000563643 DDX17Q92841 729 aaKnown RBP28.5■■■□□ 2.15
E4F1-203ENST00000563643 ANKRD30AQ9BXX3 1397 aa28.5■■■□□ 2.15
E4F1-203ENST00000563643 USP21Q9UK80 565 aa28.47■■■□□ 2.15
E4F1-203ENST00000563643 TRPC5Q9UL62 973 aaPredicted RBP28.46■■■□□ 2.15
E4F1-203ENST00000563643 PTPN23Q9H3S7 1636 aa28.46■■■□□ 2.15
E4F1-203ENST00000563643 CHGAP10645 457 aaKnown RBP28.45■■■□□ 2.14
E4F1-203ENST00000563643 CCDC125Q86Z20 511 aa28.45■■■□□ 2.14
E4F1-203ENST00000563643 CHIC2Q9UKJ5 165 aa28.45■■■□□ 2.14
E4F1-203ENST00000563643 VPS8Q8N3P4 1428 aa28.43■■■□□ 2.14
E4F1-203ENST00000563643 XRN1Q8IZH2 1706 aaKnown RBP28.4■■■□□ 2.14
E4F1-203ENST00000563643 ATRNO75882 1429 aa28.39■■■□□ 2.14
E4F1-203ENST00000563643 UNC13BO14795 1591 aa28.38■■■□□ 2.13
E4F1-203ENST00000563643 FNBP4Q8N3X1 1017 aaPredicted RBP28.38■■■□□ 2.13
E4F1-203ENST00000563643 PTCH1Q13635 1447 aa28.35■■■□□ 2.13
E4F1-203ENST00000563643 ADGRL3Q9HAR2 1447 aa28.35■■■□□ 2.13
E4F1-203ENST00000563643 LRP5O75197 1615 aa28.3■■■□□ 2.12
E4F1-203ENST00000563643 LAMC1P11047 1609 aa28.29■■■□□ 2.12
E4F1-203ENST00000563643 ADGRL2O95490 1459 aa28.29■■■□□ 2.12
E4F1-203ENST00000563643 NRXN3Q9Y4C0 1643 aa28.29■■■□□ 2.12
E4F1-203ENST00000563643 ANKRD50Q9ULJ7 1429 aa28.28■■■□□ 2.12
E4F1-203ENST00000563643 C1orf167Q5SNV9 1468 aa28.27■■■□□ 2.12
E4F1-203ENST00000563643 BLMP54132 1417 aaPredicted RBP28.27■■■□□ 2.12
E4F1-203ENST00000563643 SOS2Q07890 1332 aaPredicted RBP28.27■■■□□ 2.12
E4F1-203ENST00000563643 NALCNQ8IZF0 1738 aa28.26■■■□□ 2.12
E4F1-203ENST00000563643 LOC105371045A0A1W2PR82 267 aa28.26■■■□□ 2.11
E4F1-203ENST00000563643 METP08581 1390 aa28.24■■■□□ 2.11
E4F1-203ENST00000563643 BCL9LQ86UU0 1499 aa28.24■■■□□ 2.11
E4F1-203ENST00000563643 E9PCH4 1651 aa28.22■■■□□ 2.11
E4F1-203ENST00000563643 COL22A1Q8NFW1 1626 aaPredicted RBP28.21■■■□□ 2.11
E4F1-203ENST00000563643 DEFB132Q7Z7B7 95 aa28.21■■■□□ 2.11
E4F1-203ENST00000563643 GJD4Q96KN9 370 aaPredicted RBP28.21■■■□□ 2.11
E4F1-203ENST00000563643 MYOM2P54296 1465 aa28.2■■■□□ 2.1
E4F1-203ENST00000563643 ORAI2Q96SN7 254 aa28.19■■■□□ 2.1
E4F1-203ENST00000563643 IQGAP3Q86VI3 1631 aa28.13■■■□□ 2.09
E4F1-203ENST00000563643 SF3B2Q13435 895 aaKnown RBP28.12■■■□□ 2.09
E4F1-203ENST00000563643 GLI3P10071 1580 aa28.1■■■□□ 2.09
E4F1-203ENST00000563643 RALGAPBQ86X10 1494 aa28.09■■■□□ 2.09
E4F1-203ENST00000563643 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.07■■■□□ 2.08
E4F1-203ENST00000563643 MARF1Q9Y4F3 1742 aaKnown RBP28.07■■■□□ 2.08
E4F1-203ENST00000563643 PSDA5PKW4 1024 aaPredicted RBP28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms