RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 PHOX2BQ99453 314 aa7.5□□□□□ -1.21
LINC01416-201ENST00000563553 HDGFP51858 240 aaKnown RBP7.5□□□□□ -1.21
LINC01416-201ENST00000563553 GNPATO15228 680 aa7.49□□□□□ -1.21
LINC01416-201ENST00000563553 COPS2P61201 443 aa7.49□□□□□ -1.21
LINC01416-201ENST00000563553 PPP1R18Q6NYC8 613 aa7.49□□□□□ -1.21
LINC01416-201ENST00000563553 VSIG10Q8N0Z9 540 aa7.48□□□□□ -1.21
LINC01416-201ENST00000563553 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.47□□□□□ -1.21
LINC01416-201ENST00000563553 NLRP7Q8WX94 980 aa7.47□□□□□ -1.21
LINC01416-201ENST00000563553 BLOC1S3Q6QNY0 202 aa7.47□□□□□ -1.21
LINC01416-201ENST00000563553 ZPR1O75312 459 aa7.46□□□□□ -1.22
LINC01416-201ENST00000563553 SMYD5Q6GMV2 418 aa7.46□□□□□ -1.22
LINC01416-201ENST00000563553 OATP04181 439 aa7.45□□□□□ -1.22
LINC01416-201ENST00000563553 CFHP08603 1231 aa7.45□□□□□ -1.22
LINC01416-201ENST00000563553 TLL1O43897 1013 aa7.45□□□□□ -1.22
LINC01416-201ENST00000563553 NECTIN2Q92692 538 aa7.45□□□□□ -1.22
LINC01416-201ENST00000563553 ACTN4O43707 911 aaKnown RBP7.44□□□□□ -1.22
LINC01416-201ENST00000563553 PCDHB3Q9Y5E6 796 aa7.44□□□□□ -1.22
LINC01416-201ENST00000563553 GPIHBP1Q8IV16 184 aa7.44□□□□□ -1.22
LINC01416-201ENST00000563553 EMID1Q96A84 441 aaPredicted RBP7.44□□□□□ -1.22
LINC01416-201ENST00000563553 IRX2Q9BZI1 471 aaPredicted RBP7.44□□□□□ -1.22
LINC01416-201ENST00000563553 LCE2BO14633 110 aa7.42□□□□□ -1.22
LINC01416-201ENST00000563553 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.42□□□□□ -1.22
LINC01416-201ENST00000563553 PRR14Q9BWN1 585 aa7.41□□□□□ -1.22
LINC01416-201ENST00000563553 PRKD2Q9BZL6 878 aa7.4□□□□□ -1.22
LINC01416-201ENST00000563553 SLC4A3P48751 1232 aa7.4□□□□□ -1.23
LINC01416-201ENST00000563553 DAXXQ9UER7 740 aaPredicted RBP7.39□□□□□ -1.23
LINC01416-201ENST00000563553 RNF223E7ERA6 249 aa7.38□□□□□ -1.23
LINC01416-201ENST00000563553 PUS10Q3MIT2 529 aaKnown RBP7.38□□□□□ -1.23
LINC01416-201ENST00000563553 KMT5BQ4FZB7 885 aa7.38□□□□□ -1.23
LINC01416-201ENST00000563553 V9GY48 417 aaPredicted RBP7.37□□□□□ -1.23
LINC01416-201ENST00000563553 MAP2K5Q13163 448 aa7.36□□□□□ -1.23
LINC01416-201ENST00000563553 TMUB1Q9BVT8 246 aa7.36□□□□□ -1.23
LINC01416-201ENST00000563553 S1PR4O95977 384 aa7.35□□□□□ -1.23
LINC01416-201ENST00000563553 SCUBE3Q8IX30 993 aa7.35□□□□□ -1.23
LINC01416-201ENST00000563553 DDX11L8A8MPP1 907 aa7.35□□□□□ -1.23
LINC01416-201ENST00000563553 PPEF1O14829 653 aaPredicted RBP7.35□□□□□ -1.23
LINC01416-201ENST00000563553 FUT2Q10981 343 aa7.35□□□□□ -1.23
LINC01416-201ENST00000563553 IRF6O14896 467 aa7.34□□□□□ -1.23
LINC01416-201ENST00000563553 PLA2G2CQ5R387 149 aa7.34□□□□□ -1.23
LINC01416-201ENST00000563553 MORN1Q5T089 497 aa7.34□□□□□ -1.23
LINC01416-201ENST00000563553 TRIM67Q6ZTA4 783 aa7.34□□□□□ -1.23
LINC01416-201ENST00000563553 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.34□□□□□ -1.23
LINC01416-201ENST00000563553 THAP11Q96EK4 314 aa7.34□□□□□ -1.23
LINC01416-201ENST00000563553 ADH1BP00325 375 aa7.34□□□□□ -1.23
LINC01416-201ENST00000563553 GCGRP47871 477 aa7.34□□□□□ -1.23
LINC01416-201ENST00000563553 RDH13Q8NBN7 331 aa7.33□□□□□ -1.24
LINC01416-201ENST00000563553 NR1I2O75469 434 aa7.32□□□□□ -1.24
LINC01416-201ENST00000563553 ANKLE1Q8NAG6 615 aa7.32□□□□□ -1.24
LINC01416-201ENST00000563553 CCDC102AQ96A19 550 aa7.32□□□□□ -1.24
LINC01416-201ENST00000563553 LIAT1Q6ZQX7 453 aa7.31□□□□□ -1.24
LINC01416-201ENST00000563553 SLC27A5Q9Y2P5 690 aa7.31□□□□□ -1.24
LINC01416-201ENST00000563553 GFRA3O60609 400 aa7.3□□□□□ -1.24
LINC01416-201ENST00000563553 CD46P15529 392 aa7.3□□□□□ -1.24
LINC01416-201ENST00000563553 GGCXP38435 758 aa7.3□□□□□ -1.24
LINC01416-201ENST00000563553 Q6ZNB5 142 aa7.3□□□□□ -1.24
LINC01416-201ENST00000563553 FAM160A2Q8N612 972 aaPredicted RBP7.3□□□□□ -1.24
LINC01416-201ENST00000563553 MINK1Q8N4C8 1332 aaPredicted RBP7.3□□□□□ -1.24
LINC01416-201ENST00000563553 ATP6V1AP38606 617 aa7.29□□□□□ -1.24
LINC01416-201ENST00000563553 SULF1Q8IWU6 871 aa7.29□□□□□ -1.24
LINC01416-201ENST00000563553 SPSB2Q99619 263 aa7.29□□□□□ -1.24
LINC01416-201ENST00000563553 REPIN1Q9BWE0 567 aaKnown RBP7.29□□□□□ -1.24
LINC01416-201ENST00000563553 MDM2Q00987 491 aaPredicted RBP7.28□□□□□ -1.24
LINC01416-201ENST00000563553 SLC6A16Q9GZN6 736 aa7.28□□□□□ -1.24
LINC01416-201ENST00000563553 PRDM9Q9NQV7 894 aa7.28□□□□□ -1.24
LINC01416-201ENST00000563553 NRG2O14511 850 aaPredicted RBP7.28□□□□□ -1.24
LINC01416-201ENST00000563553 RSPH4AQ5TD94 716 aa7.28□□□□□ -1.24
LINC01416-201ENST00000563553 SPRYD7Q5W111 196 aa7.28□□□□□ -1.24
LINC01416-201ENST00000563553 LMOD2Q6P5Q4 547 aa7.28□□□□□ -1.24
LINC01416-201ENST00000563553 RNF19BQ6ZMZ0 732 aa7.28□□□□□ -1.24
LINC01416-201ENST00000563553 HLA-CQ95604 372 aa7.28□□□□□ -1.24
LINC01416-201ENST00000563553 SLC19A1P41440 591 aa7.27□□□□□ -1.25
LINC01416-201ENST00000563553 LAPTM4AQ15012 233 aa7.27□□□□□ -1.25
LINC01416-201ENST00000563553 BRICD5Q6PL45 260 aa7.27□□□□□ -1.25
LINC01416-201ENST00000563553 PDZRN3Q9UPQ7 1066 aa7.26□□□□□ -1.25
LINC01416-201ENST00000563553 SALL2Q9Y467 1007 aaPredicted RBP7.26□□□□□ -1.25
LINC01416-201ENST00000563553 ZMYND10O75800 440 aa7.24□□□□□ -1.25
LINC01416-201ENST00000563553 FAM217BQ9NTX9 383 aaPredicted RBP7.24□□□□□ -1.25
LINC01416-201ENST00000563553 TULP1O00294 542 aaPredicted RBP7.24□□□□□ -1.25
LINC01416-201ENST00000563553 ZNF598Q86UK7 904 aaKnown RBP7.24□□□□□ -1.25
LINC01416-201ENST00000563553 GDF9O60383 454 aa7.23□□□□□ -1.25
LINC01416-201ENST00000563553 ZC3H15Q8WU90 426 aaKnown RBP7.23□□□□□ -1.25
LINC01416-201ENST00000563553 BARGINQ6ZT62 677 aa7.23□□□□□ -1.25
LINC01416-201ENST00000563553 TRAF7Q6Q0C0 670 aa7.22□□□□□ -1.25
LINC01416-201ENST00000563553 GPCPD1Q9NPB8 672 aa7.22□□□□□ -1.25
LINC01416-201ENST00000563553 FCF1Q9Y324 198 aaKnown RBP7.22□□□□□ -1.25
LINC01416-201ENST00000563553 KDM4AO75164 1064 aa7.22□□□□□ -1.25
LINC01416-201ENST00000563553 FMNL1O95466 1100 aaPredicted RBP7.22□□□□□ -1.25
LINC01416-201ENST00000563553 PRR20EP86478 221 aa7.22□□□□□ -1.25
LINC01416-201ENST00000563553 PRR20CP86479 221 aa7.22□□□□□ -1.25
LINC01416-201ENST00000563553 PRR20DP86480 221 aa7.22□□□□□ -1.25
LINC01416-201ENST00000563553 PRR20BP86481 221 aa7.22□□□□□ -1.25
LINC01416-201ENST00000563553 PRR20AP86496 221 aa7.22□□□□□ -1.25
LINC01416-201ENST00000563553 MSS51Q4VC12 460 aa7.22□□□□□ -1.25
LINC01416-201ENST00000563553 HOXA2O43364 376 aa7.21□□□□□ -1.26
LINC01416-201ENST00000563553 GUCA2AQ02747 115 aa7.21□□□□□ -1.26
LINC01416-201ENST00000563553 ZNF697Q5TEC3 545 aa7.21□□□□□ -1.26
LINC01416-201ENST00000563553 PKD2L1Q9P0L9 805 aa7.21□□□□□ -1.26
LINC01416-201ENST00000563553 CLCN1P35523 988 aa7.19□□□□□ -1.26
LINC01416-201ENST00000563553 TNFRSF10AO00220 468 aa7.18□□□□□ -1.26
LINC01416-201ENST00000563553 MMP16P51512 607 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms