RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 SPATA31A6Q5VVP1 1343 aa12.53□□□□□ -0.4
HERPUD1-206ENST00000563343 TRIM52Q96A61 297 aa12.52□□□□□ -0.41
HERPUD1-206ENST00000563343 LMTK2Q8IWU2 1503 aa12.52□□□□□ -0.41
HERPUD1-206ENST00000563343 ZNF772Q68DY9 489 aaPredicted RBP12.51□□□□□ -0.41
HERPUD1-206ENST00000563343 ERBINQ96RT1 1412 aa12.5□□□□□ -0.41
HERPUD1-206ENST00000563343 GCC2Q8IWJ2 1684 aa12.5□□□□□ -0.41
HERPUD1-206ENST00000563343 NOS1P29475 1434 aa12.49□□□□□ -0.41
HERPUD1-206ENST00000563343 IDI1Q13907 227 aa12.49□□□□□ -0.41
HERPUD1-206ENST00000563343 NHSL1Q5SYE7 1610 aa12.48□□□□□ -0.41
HERPUD1-206ENST00000563343 ZFYVE9O95405 1425 aa12.47□□□□□ -0.41
HERPUD1-206ENST00000563343 NCOA3Q9Y6Q9 1424 aa12.47□□□□□ -0.41
HERPUD1-206ENST00000563343 RXRBP28702 533 aa12.47□□□□□ -0.41
HERPUD1-206ENST00000563343 PPP4R3CPQ6ZMV5 832 aa12.47□□□□□ -0.41
HERPUD1-206ENST00000563343 RGS12O14924 1447 aa12.46□□□□□ -0.41
HERPUD1-206ENST00000563343 KIF15Q9NS87 1388 aa12.46□□□□□ -0.41
HERPUD1-206ENST00000563343 TMEM131LA2VDJ0 1609 aa12.46□□□□□ -0.41
HERPUD1-206ENST00000563343 MEX3CQ5U5Q3 659 aaKnown RBP12.45□□□□□ -0.42
HERPUD1-206ENST00000563343 MYOM3Q5VTT5 1437 aa12.45□□□□□ -0.42
HERPUD1-206ENST00000563343 PLEKHG1Q9ULL1 1385 aa12.44□□□□□ -0.42
HERPUD1-206ENST00000563343 STAG3Q9UJ98 1225 aa12.44□□□□□ -0.42
HERPUD1-206ENST00000563343 ABCC5O15440 1437 aa12.43□□□□□ -0.42
HERPUD1-206ENST00000563343 AFF2P51816 1311 aa12.41□□□□□ -0.42
HERPUD1-206ENST00000563343 ADAMTS13Q76LX8 1427 aa12.41□□□□□ -0.42
HERPUD1-206ENST00000563343 SETD5Q9C0A6 1442 aa12.41□□□□□ -0.42
HERPUD1-206ENST00000563343 PTPN23Q9H3S7 1636 aa12.4□□□□□ -0.42
HERPUD1-206ENST00000563343 SETBP1Q9Y6X0 1596 aa12.4□□□□□ -0.42
HERPUD1-206ENST00000563343 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.4□□□□□ -0.42
HERPUD1-206ENST00000563343 ASXL1Q8IXJ9 1541 aa12.4□□□□□ -0.42
HERPUD1-206ENST00000563343 KANK1Q14678 1352 aa12.4□□□□□ -0.42
HERPUD1-206ENST00000563343 RIMS2Q9UQ26 1411 aa12.39□□□□□ -0.43
HERPUD1-206ENST00000563343 BRINP3Q76B58 766 aa12.39□□□□□ -0.43
HERPUD1-206ENST00000563343 TBX22Q9Y458 520 aa12.39□□□□□ -0.43
HERPUD1-206ENST00000563343 XRN1Q8IZH2 1706 aaKnown RBP12.39□□□□□ -0.43
HERPUD1-206ENST00000563343 EP400Q96L91 3159 aa12.38□□□□□ -0.43
HERPUD1-206ENST00000563343 CADPS2Q86UW7 1296 aa12.38□□□□□ -0.43
HERPUD1-206ENST00000563343 RRP7BPQ9NSQ0 103 aa12.38□□□□□ -0.43
HERPUD1-206ENST00000563343 SLC52A1Q9NWF4 448 aa12.38□□□□□ -0.43
HERPUD1-206ENST00000563343 RPRD2Q5VT52 1461 aaKnown RBP12.38□□□□□ -0.43
HERPUD1-206ENST00000563343 DAPK1P53355 1430 aa12.37□□□□□ -0.43
HERPUD1-206ENST00000563343 C19orf44Q9H6X5 657 aa12.37□□□□□ -0.43
HERPUD1-206ENST00000563343 PIK3R4Q99570 1358 aa12.37□□□□□ -0.43
HERPUD1-206ENST00000563343 LAMC1P11047 1609 aa12.37□□□□□ -0.43
HERPUD1-206ENST00000563343 DCCP43146 1447 aa12.37□□□□□ -0.43
HERPUD1-206ENST00000563343 PTPRUQ92729 1446 aa12.37□□□□□ -0.43
HERPUD1-206ENST00000563343 UNC13BO14795 1591 aa12.36□□□□□ -0.43
HERPUD1-206ENST00000563343 NUTM2BA6NNL0 878 aaPredicted RBP12.36□□□□□ -0.43
HERPUD1-206ENST00000563343 NUTM2EB1AL46 878 aaPredicted RBP12.36□□□□□ -0.43
HERPUD1-206ENST00000563343 RBM6P78332 1123 aaKnown RBP12.36□□□□□ -0.43
HERPUD1-206ENST00000563343 KANK4Q5T7N3 995 aaPredicted RBP12.36□□□□□ -0.43
HERPUD1-206ENST00000563343 NUTM2AQ8IVF1 878 aaPredicted RBP12.36□□□□□ -0.43
HERPUD1-206ENST00000563343 NRXN3Q9Y4C0 1643 aa12.36□□□□□ -0.43
HERPUD1-206ENST00000563343 BCANQ96GW7 911 aa12.35□□□□□ -0.43
HERPUD1-206ENST00000563343 TRPM2O94759 1503 aa12.35□□□□□ -0.43
HERPUD1-206ENST00000563343 MST1RQ04912 1400 aa12.35□□□□□ -0.43
HERPUD1-206ENST00000563343 ATF3P18847 181 aa12.34□□□□□ -0.43
HERPUD1-206ENST00000563343 QTRT2Q9H974 415 aaKnown RBP12.34□□□□□ -0.43
HERPUD1-206ENST00000563343 E9PCH4 1651 aa12.34□□□□□ -0.43
HERPUD1-206ENST00000563343 VPS8Q8N3P4 1428 aa12.34□□□□□ -0.43
HERPUD1-206ENST00000563343 NALCNQ8IZF0 1738 aa12.34□□□□□ -0.43
HERPUD1-206ENST00000563343 PNPLA6Q8IY17 1366 aa12.33□□□□□ -0.44
HERPUD1-206ENST00000563343 ATAD2Q6PL18 1390 aa12.32□□□□□ -0.44
HERPUD1-206ENST00000563343 MARF1Q9Y4F3 1742 aaKnown RBP12.32□□□□□ -0.44
HERPUD1-206ENST00000563343 MAPK8IP2Q13387 824 aaPredicted RBP12.32□□□□□ -0.44
HERPUD1-206ENST00000563343 C14orf37Q86TY3 774 aa12.32□□□□□ -0.44
HERPUD1-206ENST00000563343 NUTM2DQ5VT03 806 aaPredicted RBP12.31□□□□□ -0.44
HERPUD1-206ENST00000563343 C8orf37Q96NL8 207 aa12.31□□□□□ -0.44
HERPUD1-206ENST00000563343 ADGRL2O95490 1459 aa12.31□□□□□ -0.44
HERPUD1-206ENST00000563343 ANKRD30AQ9BXX3 1397 aa12.3□□□□□ -0.44
HERPUD1-206ENST00000563343 COL22A1Q8NFW1 1626 aaPredicted RBP12.29□□□□□ -0.44
HERPUD1-206ENST00000563343 PPP1R15AO75807 674 aaPredicted RBP12.29□□□□□ -0.44
HERPUD1-206ENST00000563343 HDGFP51858 240 aaKnown RBP12.29□□□□□ -0.44
HERPUD1-206ENST00000563343 LRRC59Q96AG4 307 aaKnown RBP12.29□□□□□ -0.44
HERPUD1-206ENST00000563343 LRP5O75197 1615 aa12.29□□□□□ -0.44
HERPUD1-206ENST00000563343 IQGAP3Q86VI3 1631 aa12.29□□□□□ -0.44
HERPUD1-206ENST00000563343 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.28□□□□□ -0.44
HERPUD1-206ENST00000563343 ZRANB1Q9UGI0 708 aa12.28□□□□□ -0.44
HERPUD1-206ENST00000563343 AMOTL2Q9Y2J4 779 aa12.28□□□□□ -0.44
HERPUD1-206ENST00000563343 ATRNO75882 1429 aa12.28□□□□□ -0.44
HERPUD1-206ENST00000563343 DDX17Q92841 729 aaKnown RBP12.27□□□□□ -0.45
HERPUD1-206ENST00000563343 BRWD3Q6RI45 1802 aa12.27□□□□□ -0.45
HERPUD1-206ENST00000563343 NGLY1Q96IV0 654 aa12.26□□□□□ -0.45
HERPUD1-206ENST00000563343 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.25□□□□□ -0.45
HERPUD1-206ENST00000563343 CHIC2Q9UKJ5 165 aa12.25□□□□□ -0.45
HERPUD1-206ENST00000563343 ADGRL3Q9HAR2 1447 aa12.25□□□□□ -0.45
HERPUD1-206ENST00000563343 PTCH1Q13635 1447 aa12.23□□□□□ -0.45
HERPUD1-206ENST00000563343 ANKRD50Q9ULJ7 1429 aa12.23□□□□□ -0.45
HERPUD1-206ENST00000563343 ADAMTS2O95450 1211 aa12.23□□□□□ -0.45
HERPUD1-206ENST00000563343 FNBP4Q8N3X1 1017 aaPredicted RBP12.23□□□□□ -0.45
HERPUD1-206ENST00000563343 SPHKAPQ2M3C7 1700 aa12.23□□□□□ -0.45
HERPUD1-206ENST00000563343 C1orf167Q5SNV9 1468 aa12.22□□□□□ -0.45
HERPUD1-206ENST00000563343 USP21Q9UK80 565 aa12.22□□□□□ -0.45
HERPUD1-206ENST00000563343 TRPC5Q9UL62 973 aaPredicted RBP12.22□□□□□ -0.45
HERPUD1-206ENST00000563343 BCL9LQ86UU0 1499 aa12.21□□□□□ -0.45
HERPUD1-206ENST00000563343 METP08581 1390 aa12.21□□□□□ -0.45
HERPUD1-206ENST00000563343 SOS2Q07890 1332 aaPredicted RBP12.21□□□□□ -0.45
HERPUD1-206ENST00000563343 CCDC125Q86Z20 511 aa12.21□□□□□ -0.45
HERPUD1-206ENST00000563343 GLI3P10071 1580 aa12.21□□□□□ -0.46
HERPUD1-206ENST00000563343 MYOM2P54296 1465 aa12.21□□□□□ -0.46
HERPUD1-206ENST00000563343 CHGAP10645 457 aaKnown RBP12.2□□□□□ -0.46
HERPUD1-206ENST00000563343 NEXMIFQ5QGS0 1516 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms