RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 EID1Q9Y6B2 187 aa14.09□□□□□ -0.15
CHRFAM7A-204ENST00000562729 LMTK2Q8IWU2 1503 aa14.09□□□□□ -0.15
CHRFAM7A-204ENST00000562729 SPDYE2BA6NHP3 402 aa14.08□□□□□ -0.16
CHRFAM7A-204ENST00000562729 SPDYE6P0CI01 402 aa14.08□□□□□ -0.16
CHRFAM7A-204ENST00000562729 SPDYE2Q495Y8 402 aa14.08□□□□□ -0.16
CHRFAM7A-204ENST00000562729 EFCAB6Q5THR3 1501 aa14.08□□□□□ -0.16
CHRFAM7A-204ENST00000562729 NPHP4O75161 1426 aaPredicted RBP14.07□□□□□ -0.16
CHRFAM7A-204ENST00000562729 UBR1Q8IWV7 1749 aa14.07□□□□□ -0.16
CHRFAM7A-204ENST00000562729 LTBP4Q8N2S1 1624 aa14.07□□□□□ -0.16
CHRFAM7A-204ENST00000562729 VWDEQ8N2E2 1590 aa14.06□□□□□ -0.16
CHRFAM7A-204ENST00000562729 NEURL4Q96JN8 1562 aa14.06□□□□□ -0.16
CHRFAM7A-204ENST00000562729 IQGAP1P46940 1657 aa14.06□□□□□ -0.16
CHRFAM7A-204ENST00000562729 PIK3C2BO00750 1634 aa14.05□□□□□ -0.16
CHRFAM7A-204ENST00000562729 TXNDC2Q86VQ3 553 aa14.05□□□□□ -0.16
CHRFAM7A-204ENST00000562729 UNC13BO14795 1591 aa14.05□□□□□ -0.16
CHRFAM7A-204ENST00000562729 TET3O43151 1660 aa14.04□□□□□ -0.16
CHRFAM7A-204ENST00000562729 BCANQ96GW7 911 aa14.04□□□□□ -0.16
CHRFAM7A-204ENST00000562729 NUP155O75694 1391 aa14.04□□□□□ -0.16
CHRFAM7A-204ENST00000562729 IQSEC2Q5JU85 1478 aa14.04□□□□□ -0.16
CHRFAM7A-204ENST00000562729 RPRD2Q5VT52 1461 aaKnown RBP14.04□□□□□ -0.16
CHRFAM7A-204ENST00000562729 IDI1Q13907 227 aa14.03□□□□□ -0.16
CHRFAM7A-204ENST00000562729 SLC52A1Q9NWF4 448 aa14.03□□□□□ -0.16
CHRFAM7A-204ENST00000562729 SCAF11Q99590 1463 aaKnown RBP14.03□□□□□ -0.16
CHRFAM7A-204ENST00000562729 GCC2Q8IWJ2 1684 aa14.03□□□□□ -0.16
CHRFAM7A-204ENST00000562729 MED14O60244 1454 aa14.02□□□□□ -0.16
CHRFAM7A-204ENST00000562729 RRBP1Q9P2E9 1410 aaKnown RBP14.02□□□□□ -0.16
CHRFAM7A-204ENST00000562729 UBAP1LF5GYI3 381 aa14.02□□□□□ -0.17
CHRFAM7A-204ENST00000562729 CHGAP10645 457 aaKnown RBP14.02□□□□□ -0.17
CHRFAM7A-204ENST00000562729 CPS1P31327 1500 aa14.01□□□□□ -0.17
CHRFAM7A-204ENST00000562729 SYNMO15061 1565 aa14□□□□□ -0.17
CHRFAM7A-204ENST00000562729 PPP1R15AO75807 674 aaPredicted RBP14□□□□□ -0.17
CHRFAM7A-204ENST00000562729 IQGAP3Q86VI3 1631 aa14□□□□□ -0.17
CHRFAM7A-204ENST00000562729 SLIT1O75093 1534 aa14□□□□□ -0.17
CHRFAM7A-204ENST00000562729 NOS1P29475 1434 aa13.99□□□□□ -0.17
CHRFAM7A-204ENST00000562729 TMEM2Q9UHN6 1383 aa13.99□□□□□ -0.17
CHRFAM7A-204ENST00000562729 KDM5AP29375 1690 aaKnown RBP13.99□□□□□ -0.17
CHRFAM7A-204ENST00000562729 HDGFP51858 240 aaKnown RBP13.99□□□□□ -0.17
CHRFAM7A-204ENST00000562729 MKRN4PQ13434 485 aaPredicted RBP13.99□□□□□ -0.17
CHRFAM7A-204ENST00000562729 ADGRB3O60242 1522 aa13.99□□□□□ -0.17
CHRFAM7A-204ENST00000562729 LTKP29376 864 aa13.98□□□□□ -0.17
CHRFAM7A-204ENST00000562729 EVX2Q03828 476 aa13.97□□□□□ -0.17
CHRFAM7A-204ENST00000562729 TRIM52Q96A61 297 aa13.97□□□□□ -0.17
CHRFAM7A-204ENST00000562729 ARHGAP23Q9P227 1491 aa13.97□□□□□ -0.17
CHRFAM7A-204ENST00000562729 E9PCH4 1651 aa13.97□□□□□ -0.17
CHRFAM7A-204ENST00000562729 TOM1O60784 492 aa13.96□□□□□ -0.17
CHRFAM7A-204ENST00000562729 PIP4K2BP78356 416 aa13.95□□□□□ -0.18
CHRFAM7A-204ENST00000562729 NAIPQ13075 1403 aa13.92□□□□□ -0.18
CHRFAM7A-204ENST00000562729 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.92□□□□□ -0.18
CHRFAM7A-204ENST00000562729 SLC26A8Q96RN1 970 aa13.92□□□□□ -0.18
CHRFAM7A-204ENST00000562729 MYO5BQ9ULV0 1848 aa13.92□□□□□ -0.18
CHRFAM7A-204ENST00000562729 RIMS2Q9UQ26 1411 aa13.91□□□□□ -0.18
CHRFAM7A-204ENST00000562729 ZNF326Q5BKZ1 582 aaKnown RBP13.91□□□□□ -0.18
CHRFAM7A-204ENST00000562729 HFM1A2PYH4 1435 aa13.9□□□□□ -0.18
CHRFAM7A-204ENST00000562729 TMEM131LA2VDJ0 1609 aa13.9□□□□□ -0.18
CHRFAM7A-204ENST00000562729 SPHKAPQ2M3C7 1700 aa13.9□□□□□ -0.18
CHRFAM7A-204ENST00000562729 SPDYE1Q8NFV5 336 aaPredicted RBP13.9□□□□□ -0.18
CHRFAM7A-204ENST00000562729 NUTM2DQ5VT03 806 aaPredicted RBP13.89□□□□□ -0.19
CHRFAM7A-204ENST00000562729 CLEC11AQ9Y240 323 aa13.89□□□□□ -0.19
CHRFAM7A-204ENST00000562729 STRCP1A6NGW2 1772 aa13.88□□□□□ -0.19
CHRFAM7A-204ENST00000562729 PRKAR2AP13861 404 aaKnown RBP13.88□□□□□ -0.19
CHRFAM7A-204ENST00000562729 SSUH2Q9Y2M2 353 aa13.88□□□□□ -0.19
CHRFAM7A-204ENST00000562729 LRRC7Q96NW7 1537 aa13.88□□□□□ -0.19
CHRFAM7A-204ENST00000562729 ZNF692Q9BU19 519 aaPredicted RBP13.87□□□□□ -0.19
CHRFAM7A-204ENST00000562729 PLEKHG1Q9ULL1 1385 aa13.86□□□□□ -0.19
CHRFAM7A-204ENST00000562729 KCNA6P17658 529 aa13.86□□□□□ -0.19
CHRFAM7A-204ENST00000562729 PROSER2Q86WR7 435 aaPredicted RBP13.86□□□□□ -0.19
CHRFAM7A-204ENST00000562729 ZFYVE9O95405 1425 aa13.85□□□□□ -0.19
CHRFAM7A-204ENST00000562729 C14orf37Q86TY3 774 aa13.84□□□□□ -0.19
CHRFAM7A-204ENST00000562729 DISP3Q9P2K9 1392 aa13.83□□□□□ -0.19
CHRFAM7A-204ENST00000562729 KIF1BO60333 1816 aa13.83□□□□□ -0.2
CHRFAM7A-204ENST00000562729 TRPM2O94759 1503 aa13.82□□□□□ -0.2
CHRFAM7A-204ENST00000562729 TMEM94Q12767 1356 aa13.82□□□□□ -0.2
CHRFAM7A-204ENST00000562729 HSPA1LP34931 641 aa13.81□□□□□ -0.2
CHRFAM7A-204ENST00000562729 RBM33Q96EV2 1170 aaKnown RBP13.81□□□□□ -0.2
CHRFAM7A-204ENST00000562729 NKTRP30414 1462 aaKnown RBP13.8□□□□□ -0.2
CHRFAM7A-204ENST00000562729 DIP2AQ14689 1571 aa13.8□□□□□ -0.2
CHRFAM7A-204ENST00000562729 CLTCL1P53675 1640 aa13.8□□□□□ -0.2
CHRFAM7A-204ENST00000562729 TBX22Q9Y458 520 aa13.8□□□□□ -0.2
CHRFAM7A-204ENST00000562729 ACIN1Q9UKV3 1341 aaKnown RBP13.8□□□□□ -0.2
CHRFAM7A-204ENST00000562729 MSH6P52701 1360 aa13.8□□□□□ -0.2
CHRFAM7A-204ENST00000562729 NWD1Q149M9 1564 aa13.78□□□□□ -0.2
CHRFAM7A-204ENST00000562729 CHD2O14647 1828 aaKnown RBP13.78□□□□□ -0.2
CHRFAM7A-204ENST00000562729 XIRP1Q702N8 1843 aaKnown RBP13.78□□□□□ -0.2
CHRFAM7A-204ENST00000562729 SETD5Q9C0A6 1442 aa13.76□□□□□ -0.21
CHRFAM7A-204ENST00000562729 MPHOSPH9Q99550 1183 aa13.76□□□□□ -0.21
CHRFAM7A-204ENST00000562729 CCDC144AA2RUR9 1427 aa13.75□□□□□ -0.21
CHRFAM7A-204ENST00000562729 ADAMTS13Q76LX8 1427 aa13.75□□□□□ -0.21
CHRFAM7A-204ENST00000562729 PIK3R4Q99570 1358 aa13.75□□□□□ -0.21
CHRFAM7A-204ENST00000562729 C19orf67A6NJJ6 358 aa13.75□□□□□ -0.21
CHRFAM7A-204ENST00000562729 VGFO15240 615 aaPredicted RBP13.75□□□□□ -0.21
CHRFAM7A-204ENST00000562729 ATF3P18847 181 aa13.74□□□□□ -0.21
CHRFAM7A-204ENST00000562729 AMOTL2Q9Y2J4 779 aa13.74□□□□□ -0.21
CHRFAM7A-204ENST00000562729 ALKQ9UM73 1620 aa13.73□□□□□ -0.21
CHRFAM7A-204ENST00000562729 NEXMIFQ5QGS0 1516 aa13.73□□□□□ -0.21
CHRFAM7A-204ENST00000562729 RPGRIP1LQ68CZ1 1315 aa13.72□□□□□ -0.21
CHRFAM7A-204ENST00000562729 SETBP1Q9Y6X0 1596 aa13.72□□□□□ -0.21
CHRFAM7A-204ENST00000562729 RGL3Q3MIN7 710 aa13.71□□□□□ -0.21
CHRFAM7A-204ENST00000562729 SLAIN2Q9P270 581 aa13.71□□□□□ -0.21
CHRFAM7A-204ENST00000562729 CADPS2Q86UW7 1296 aa13.7□□□□□ -0.22
CHRFAM7A-204ENST00000562729 RAB3GAP2Q9H2M9 1393 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms