RNA–Protein interactions for RNA: ENST00000562616.1

CCP110-206, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 3

Gene CCP110, Length 1,679 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-206ENST00000562616 STK24Q9Y6E0 443 aa13.52□□□□□ -0.25
CCP110-206ENST00000562616 CCNB3Q8WWL7 1395 aa13.52□□□□□ -0.25
CCP110-206ENST00000562616 FAM205CA6NFA0 338 aa13.51□□□□□ -0.25
CCP110-206ENST00000562616 CHRM1P11229 460 aaPredicted RBP13.5□□□□□ -0.25
CCP110-206ENST00000562616 WDR70Q9NW82 654 aa13.5□□□□□ -0.25
CCP110-206ENST00000562616 ARAP3Q8WWN8 1544 aa13.5□□□□□ -0.25
CCP110-206ENST00000562616 GPATCH8Q9UKJ3 1502 aaKnown RBP13.5□□□□□ -0.25
CCP110-206ENST00000562616 BCL11BQ9C0K0 894 aaPredicted RBP13.5□□□□□ -0.25
CCP110-206ENST00000562616 NEO1Q92859 1461 aa13.49□□□□□ -0.25
CCP110-206ENST00000562616 C3orf67Q6ZVT6 689 aa13.48□□□□□ -0.25
CCP110-206ENST00000562616 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.48□□□□□ -0.25
CCP110-206ENST00000562616 AKNAQ7Z591 1439 aa13.47□□□□□ -0.25
CCP110-206ENST00000562616 HECW2Q9P2P5 1572 aa13.47□□□□□ -0.25
CCP110-206ENST00000562616 EFCAB2Q5VUJ9 269 aa13.47□□□□□ -0.25
CCP110-206ENST00000562616 ZNF777Q9ULD5 760 aaPredicted RBP13.47□□□□□ -0.25
CCP110-206ENST00000562616 MYOM3Q5VTT5 1437 aa13.46□□□□□ -0.26
CCP110-206ENST00000562616 SAMD9LQ8IVG5 1584 aa13.46□□□□□ -0.26
CCP110-206ENST00000562616 FGD6Q6ZV73 1430 aa13.45□□□□□ -0.26
CCP110-206ENST00000562616 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.45□□□□□ -0.26
CCP110-206ENST00000562616 ZFP91Q96JP5 570 aaPredicted RBP13.45□□□□□ -0.26
CCP110-206ENST00000562616 CFDP1Q9UEE9 299 aaPredicted RBP13.45□□□□□ -0.26
CCP110-206ENST00000562616 ABCC1P33527 1531 aa13.43□□□□□ -0.26
CCP110-206ENST00000562616 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.43□□□□□ -0.26
CCP110-206ENST00000562616 FAM50AQ14320 339 aaKnown RBP13.43□□□□□ -0.26
CCP110-206ENST00000562616 L3MBTL3Q96JM7 780 aaPredicted RBP13.43□□□□□ -0.26
CCP110-206ENST00000562616 SCAPERQ9BY12 1400 aa13.42□□□□□ -0.26
CCP110-206ENST00000562616 RICTORQ6R327 1708 aa13.42□□□□□ -0.26
CCP110-206ENST00000562616 DENND4BO75064 1496 aaPredicted RBP13.42□□□□□ -0.26
CCP110-206ENST00000562616 SYCP2Q9BX26 1530 aa13.42□□□□□ -0.26
CCP110-206ENST00000562616 FRMPD1Q5SYB0 1578 aa13.41□□□□□ -0.26
CCP110-206ENST00000562616 KCNV2Q8TDN2 545 aa13.41□□□□□ -0.26
CCP110-206ENST00000562616 CAMSAP2Q08AD1 1489 aa13.41□□□□□ -0.26
CCP110-206ENST00000562616 RAPGEF3O95398 923 aa13.4□□□□□ -0.26
CCP110-206ENST00000562616 BRPF1P55201 1214 aaPredicted RBP13.4□□□□□ -0.26
CCP110-206ENST00000562616 ZNF644Q9H582 1327 aaPredicted RBP13.4□□□□□ -0.26
CCP110-206ENST00000562616 MIA2Q96PC5 1412 aa13.4□□□□□ -0.26
CCP110-206ENST00000562616 ARHGEF12Q9NZN5 1544 aa13.4□□□□□ -0.26
CCP110-206ENST00000562616 PDCD7Q8N8D1 485 aaKnown RBP13.39□□□□□ -0.27
CCP110-206ENST00000562616 PTPN23Q9H3S7 1636 aa13.38□□□□□ -0.27
CCP110-206ENST00000562616 PLEKHH2Q8IVE3 1493 aa13.38□□□□□ -0.27
CCP110-206ENST00000562616 POGZQ7Z3K3 1410 aa13.38□□□□□ -0.27
CCP110-206ENST00000562616 ITGAEP38570 1179 aa13.37□□□□□ -0.27
CCP110-206ENST00000562616 TCOF1Q13428 1488 aaKnown RBP13.37□□□□□ -0.27
CCP110-206ENST00000562616 TRAPPC8Q9Y2L5 1435 aa13.37□□□□□ -0.27
CCP110-206ENST00000562616 HNRNPMP52272 730 aaKnown RBP eCLIP13.37□□□□□ -0.27
CCP110-206ENST00000562616 ZNF518AQ6AHZ1 1483 aa13.36□□□□□ -0.27
CCP110-206ENST00000562616 KIAA1107Q9UPP5 1409 aa13.35□□□□□ -0.27
CCP110-206ENST00000562616 AFAP1Q8N556 730 aa13.34□□□□□ -0.27
CCP110-206ENST00000562616 PCDHB8Q9UN66 801 aa13.34□□□□□ -0.27
CCP110-206ENST00000562616 KDM5CP41229 1560 aa13.34□□□□□ -0.27
CCP110-206ENST00000562616 ZMYM4Q5VZL5 1548 aa13.34□□□□□ -0.27
CCP110-206ENST00000562616 PYGBP11216 843 aa13.34□□□□□ -0.27
CCP110-206ENST00000562616 MBD5Q9P267 1494 aa13.33□□□□□ -0.28
CCP110-206ENST00000562616 FBXO41Q8TF61 875 aa13.33□□□□□ -0.28
CCP110-206ENST00000562616 MYT1LQ9UL68 1186 aa13.33□□□□□ -0.28
CCP110-206ENST00000562616 ARHGEF5Q12774 1597 aa13.32□□□□□ -0.28
CCP110-206ENST00000562616 RNF166Q96A37 237 aaPredicted RBP13.32□□□□□ -0.28
CCP110-206ENST00000562616 CCDC141Q6ZP82 1450 aa13.32□□□□□ -0.28
CCP110-206ENST00000562616 ZFYVE16Q7Z3T8 1539 aa13.31□□□□□ -0.28
CCP110-206ENST00000562616 ARHGEF40Q8TER5 1519 aa13.31□□□□□ -0.28
CCP110-206ENST00000562616 MKRN3Q13064 507 aaKnown RBP13.31□□□□□ -0.28
CCP110-206ENST00000562616 NEUROD2Q15784 382 aa13.31□□□□□ -0.28
CCP110-206ENST00000562616 YEATS2Q9ULM3 1422 aa13.3□□□□□ -0.28
CCP110-206ENST00000562616 INO80Q9ULG1 1556 aaPredicted RBP13.3□□□□□ -0.28
CCP110-206ENST00000562616 CROCC2H7BZ55 1655 aa13.3□□□□□ -0.28
CCP110-206ENST00000562616 DNMT1P26358 1616 aaKnown RBP13.29□□□□□ -0.28
CCP110-206ENST00000562616 KIDINS220Q9ULH0 1771 aa13.29□□□□□ -0.28
CCP110-206ENST00000562616 GOLGA2Q08379 1002 aa13.29□□□□□ -0.28
CCP110-206ENST00000562616 ABCA6Q8N139 1617 aa13.29□□□□□ -0.28
CCP110-206ENST00000562616 ATP7AQ04656 1500 aa13.29□□□□□ -0.28
CCP110-206ENST00000562616 SPAG9O60271 1321 aaKnown RBP13.29□□□□□ -0.28
CCP110-206ENST00000562616 MAGI2Q86UL8 1455 aa13.28□□□□□ -0.28
CCP110-206ENST00000562616 PTPRKQ15262 1439 aa13.28□□□□□ -0.28
CCP110-206ENST00000562616 MLH3Q9UHC1 1453 aa13.28□□□□□ -0.28
CCP110-206ENST00000562616 DIP2CQ9Y2E4 1556 aa13.27□□□□□ -0.28
CCP110-206ENST00000562616 HRCP23327 699 aa13.27□□□□□ -0.29
CCP110-206ENST00000562616 CADPS2Q86UW7 1296 aa13.27□□□□□ -0.29
CCP110-206ENST00000562616 ZC3H15Q8WU90 426 aaKnown RBP13.27□□□□□ -0.29
CCP110-206ENST00000562616 DAPK1P53355 1430 aa13.27□□□□□ -0.29
CCP110-206ENST00000562616 ABCC5O15440 1437 aa13.26□□□□□ -0.29
CCP110-206ENST00000562616 RSPH4AQ5TD94 716 aa13.26□□□□□ -0.29
CCP110-206ENST00000562616 CCER1Q8TC90 406 aaPredicted RBP13.26□□□□□ -0.29
CCP110-206ENST00000562616 ARHGEF1Q92888 912 aaKnown RBP13.26□□□□□ -0.29
CCP110-206ENST00000562616 SETD5Q9C0A6 1442 aa13.25□□□□□ -0.29
CCP110-206ENST00000562616 MAST1Q9Y2H9 1570 aa13.25□□□□□ -0.29
CCP110-206ENST00000562616 C9orf84Q5VXU9 1444 aa13.25□□□□□ -0.29
CCP110-206ENST00000562616 PTPRMP28827 1452 aa13.25□□□□□ -0.29
CCP110-206ENST00000562616 TSPY4P0CV99 314 aa13.24□□□□□ -0.29
CCP110-206ENST00000562616 TSPY10P0CW01 314 aa13.24□□□□□ -0.29
CCP110-206ENST00000562616 ADGBQ8N7X0 1667 aa13.24□□□□□ -0.29
CCP110-206ENST00000562616 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.24□□□□□ -0.29
CCP110-206ENST00000562616 SIGLEC1Q9BZZ2 1709 aa13.23□□□□□ -0.29
CCP110-206ENST00000562616 ATP10AO60312 1499 aa13.23□□□□□ -0.29
CCP110-206ENST00000562616 SHANK2Q9UPX8 1470 aa13.23□□□□□ -0.29
CCP110-206ENST00000562616 RAB3GAP2Q9H2M9 1393 aa13.23□□□□□ -0.29
CCP110-206ENST00000562616 RTEL1-TNFRSF6BF6WH68 1400 aa13.23□□□□□ -0.29
CCP110-206ENST00000562616 ADAMTSL3P82987 1691 aa13.22□□□□□ -0.29
CCP110-206ENST00000562616 CHIC2Q9UKJ5 165 aa13.22□□□□□ -0.29
CCP110-206ENST00000562616 HFM1A2PYH4 1435 aa13.22□□□□□ -0.29
CCP110-206ENST00000562616 HOXB1P14653 301 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms