RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 SPATA31D1Q6ZQQ2 1576 aa13.29□□□□□ -0.28
CDH13-205ENST00000562307 CLTCQ00610 1675 aaKnown RBP13.29□□□□□ -0.28
CDH13-205ENST00000562307 CHGAP10645 457 aaKnown RBP13.29□□□□□ -0.28
CDH13-205ENST00000562307 ZFYVE9O95405 1425 aa13.29□□□□□ -0.28
CDH13-205ENST00000562307 MLECQ14165 292 aa13.28□□□□□ -0.28
CDH13-205ENST00000562307 CFAP65Q6ZU64 1925 aaKnown RBP13.28□□□□□ -0.28
CDH13-205ENST00000562307 ZMYM3Q14202 1370 aa13.28□□□□□ -0.28
CDH13-205ENST00000562307 VGFO15240 615 aaPredicted RBP13.27□□□□□ -0.29
CDH13-205ENST00000562307 PPLO60437 1756 aa13.27□□□□□ -0.29
CDH13-205ENST00000562307 TMEM131LA2VDJ0 1609 aa13.26□□□□□ -0.29
CDH13-205ENST00000562307 PIK3C2GO75747 1445 aa13.26□□□□□ -0.29
CDH13-205ENST00000562307 TESK2Q96S53 571 aa13.26□□□□□ -0.29
CDH13-205ENST00000562307 SCAF11Q99590 1463 aaKnown RBP13.26□□□□□ -0.29
CDH13-205ENST00000562307 ESF1Q9H501 851 aaKnown RBP13.26□□□□□ -0.29
CDH13-205ENST00000562307 C14orf93Q9H972 538 aaKnown RBP13.26□□□□□ -0.29
CDH13-205ENST00000562307 NEXMIFQ5QGS0 1516 aa13.25□□□□□ -0.29
CDH13-205ENST00000562307 CFAP70Q5T0N1 1121 aa13.25□□□□□ -0.29
CDH13-205ENST00000562307 IQGAP1P46940 1657 aa13.24□□□□□ -0.29
CDH13-205ENST00000562307 ANP32CO43423 234 aa13.24□□□□□ -0.29
CDH13-205ENST00000562307 SETBP1Q9Y6X0 1596 aa13.24□□□□□ -0.29
CDH13-205ENST00000562307 CCER2I3L3R5 266 aa13.22□□□□□ -0.29
CDH13-205ENST00000562307 SLC24A1O60721 1099 aa13.21□□□□□ -0.29
CDH13-205ENST00000562307 A2ML1A8K2U0 1454 aa13.21□□□□□ -0.3
CDH13-205ENST00000562307 EIF3AQ14152 1382 aaKnown RBP13.2□□□□□ -0.3
CDH13-205ENST00000562307 ADGRB1O14514 1584 aa13.2□□□□□ -0.3
CDH13-205ENST00000562307 TNRQ92752 1358 aa13.2□□□□□ -0.3
CDH13-205ENST00000562307 TMF1P82094 1093 aa13.19□□□□□ -0.3
CDH13-205ENST00000562307 DISP3Q9P2K9 1392 aa13.18□□□□□ -0.3
CDH13-205ENST00000562307 STAG3Q9UJ98 1225 aa13.17□□□□□ -0.3
CDH13-205ENST00000562307 SBNO2Q9Y2G9 1366 aa13.17□□□□□ -0.3
CDH13-205ENST00000562307 MYO5BQ9ULV0 1848 aa13.16□□□□□ -0.3
CDH13-205ENST00000562307 KDM5AP29375 1690 aaKnown RBP13.16□□□□□ -0.3
CDH13-205ENST00000562307 CDCA8Q53HL2 280 aa13.16□□□□□ -0.3
CDH13-205ENST00000562307 RIMS2Q9UQ26 1411 aa13.15□□□□□ -0.3
CDH13-205ENST00000562307 MYO3AQ8NEV4 1616 aa13.15□□□□□ -0.3
CDH13-205ENST00000562307 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.15□□□□□ -0.3
CDH13-205ENST00000562307 PRKRIP1Q9H875 184 aaPredicted RBP13.15□□□□□ -0.3
CDH13-205ENST00000562307 NLRP1Q9C000 1473 aa13.15□□□□□ -0.3
CDH13-205ENST00000562307 NUTM2DQ5VT03 806 aaPredicted RBP13.14□□□□□ -0.31
CDH13-205ENST00000562307 HDGFP51858 240 aaKnown RBP13.13□□□□□ -0.31
CDH13-205ENST00000562307 POLR3GLQ9BT43 218 aa13.13□□□□□ -0.31
CDH13-205ENST00000562307 TMEM132EQ6IEE7 984 aa13.12□□□□□ -0.31
CDH13-205ENST00000562307 CENPJQ9HC77 1338 aaPredicted RBP13.12□□□□□ -0.31
CDH13-205ENST00000562307 PER1O15534 1290 aaPredicted RBP13.11□□□□□ -0.31
CDH13-205ENST00000562307 CEBPAP49715 358 aaPredicted RBP13.11□□□□□ -0.31
CDH13-205ENST00000562307 TRAK1Q9UPV9 953 aa13.11□□□□□ -0.31
CDH13-205ENST00000562307 C3P01024 1663 aa13.11□□□□□ -0.31
CDH13-205ENST00000562307 ALKQ9UM73 1620 aa13.1□□□□□ -0.31
CDH13-205ENST00000562307 TMEM2Q9UHN6 1383 aa13.1□□□□□ -0.31
CDH13-205ENST00000562307 FER1L4A9Z1Z3 1794 aa13.1□□□□□ -0.31
CDH13-205ENST00000562307 ASXL1Q8IXJ9 1541 aa13.1□□□□□ -0.31
CDH13-205ENST00000562307 CENPBP07199 599 aaPredicted RBP13.1□□□□□ -0.31
CDH13-205ENST00000562307 PUS7Q96PZ0 661 aaKnown RBP13.1□□□□□ -0.31
CDH13-205ENST00000562307 KTN1Q86UP2 1357 aaKnown RBP13.09□□□□□ -0.31
CDH13-205ENST00000562307 UBR1Q8IWV7 1749 aa13.09□□□□□ -0.31
CDH13-205ENST00000562307 YTHDC2Q9H6S0 1430 aaKnown RBP13.07□□□□□ -0.32
CDH13-205ENST00000562307 YTHDC1Q96MU7 727 aaKnown RBP13.07□□□□□ -0.32
CDH13-205ENST00000562307 PANK3Q9H999 370 aa13.07□□□□□ -0.32
CDH13-205ENST00000562307 ADAMTSL3P82987 1691 aa13.07□□□□□ -0.32
CDH13-205ENST00000562307 PTPRMP28827 1452 aa13.06□□□□□ -0.32
CDH13-205ENST00000562307 AEBP2Q6ZN18 517 aaPredicted RBP13.06□□□□□ -0.32
CDH13-205ENST00000562307 ARHGAP23Q9P227 1491 aa13.05□□□□□ -0.32
CDH13-205ENST00000562307 SLIT1O75093 1534 aa13.05□□□□□ -0.32
CDH13-205ENST00000562307 DLC1Q96QB1 1528 aa13.05□□□□□ -0.32
CDH13-205ENST00000562307 RALBP1Q15311 655 aa13.05□□□□□ -0.32
CDH13-205ENST00000562307 LRPPRCP42704 1394 aaKnown RBP13.05□□□□□ -0.32
CDH13-205ENST00000562307 ABCC11Q96J66 1382 aa13.05□□□□□ -0.32
CDH13-205ENST00000562307 ARHGEF28Q8N1W1 1705 aaKnown RBP13.05□□□□□ -0.32
CDH13-205ENST00000562307 NRXN3Q9Y4C0 1643 aa13.04□□□□□ -0.32
CDH13-205ENST00000562307 SIRT1Q96EB6 747 aa13.04□□□□□ -0.32
CDH13-205ENST00000562307 SETD1AO15047 1707 aaKnown RBP13.04□□□□□ -0.32
CDH13-205ENST00000562307 PLEKHG1Q9ULL1 1385 aa13.04□□□□□ -0.32
CDH13-205ENST00000562307 QRICH2Q9H0J4 1663 aa13.03□□□□□ -0.32
CDH13-205ENST00000562307 THEMISQ8N1K5 641 aaPredicted RBP13.03□□□□□ -0.32
CDH13-205ENST00000562307 LTKP29376 864 aa13.02□□□□□ -0.33
CDH13-205ENST00000562307 STK26Q9P289 416 aa13.02□□□□□ -0.33
CDH13-205ENST00000562307 EVC2Q86UK5 1308 aa13.02□□□□□ -0.33
CDH13-205ENST00000562307 PARD3Q8TEW0 1356 aa13.02□□□□□ -0.33
CDH13-205ENST00000562307 CCDC184Q52MB2 194 aa13.01□□□□□ -0.33
CDH13-205ENST00000562307 METP08581 1390 aa13.01□□□□□ -0.33
CDH13-205ENST00000562307 NPC1L1Q9UHC9 1359 aa13.01□□□□□ -0.33
CDH13-205ENST00000562307 ADAMTS13Q76LX8 1427 aa13.01□□□□□ -0.33
CDH13-205ENST00000562307 MED14O60244 1454 aa13.01□□□□□ -0.33
CDH13-205ENST00000562307 MYOM1P52179 1685 aa13.01□□□□□ -0.33
CDH13-205ENST00000562307 RIMS1Q86UR5 1692 aaKnown RBP13□□□□□ -0.33
CDH13-205ENST00000562307 TECPR2O15040 1411 aa13□□□□□ -0.33
CDH13-205ENST00000562307 TXNDC2Q86VQ3 553 aa13□□□□□ -0.33
CDH13-205ENST00000562307 PRAM1Q96QH2 718 aa13□□□□□ -0.33
CDH13-205ENST00000562307 EID1Q9Y6B2 187 aa13□□□□□ -0.33
CDH13-205ENST00000562307 TULP4Q9NRJ4 1543 aa12.99□□□□□ -0.33
CDH13-205ENST00000562307 MYBBP1AQ9BQG0 1328 aaKnown RBP12.99□□□□□ -0.33
CDH13-205ENST00000562307 AMER1Q5JTC6 1135 aaPredicted RBP12.99□□□□□ -0.33
CDH13-205ENST00000562307 MRS2Q9HD23 443 aa12.99□□□□□ -0.33
CDH13-205ENST00000562307 FAM135BQ49AJ0 1406 aa12.98□□□□□ -0.33
CDH13-205ENST00000562307 POGKQ9P215 609 aa12.98□□□□□ -0.33
CDH13-205ENST00000562307 KNSTRNQ9Y448 316 aa12.98□□□□□ -0.33
CDH13-205ENST00000562307 TBX22Q9Y458 520 aa12.98□□□□□ -0.33
CDH13-205ENST00000562307 BRD4O60885 1362 aaPredicted RBP12.97□□□□□ -0.33
CDH13-205ENST00000562307 SENP3Q9H4L4 574 aaPredicted RBP12.97□□□□□ -0.33
CDH13-205ENST00000562307 CEP170BQ9Y4F5 1589 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms