RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 CLTCQ00610 1675 aaKnown RBP23.01■■□□□ 1.27
PKD1-225ENST00000562297 PPP6R1Q9UPN7 881 aa23■■□□□ 1.27
PKD1-225ENST00000562297 ADGRF5Q8IZF2 1346 aa23■■□□□ 1.27
PKD1-225ENST00000562297 TESK2Q96S53 571 aa22.99■■□□□ 1.27
PKD1-225ENST00000562297 MYO5BQ9ULV0 1848 aa22.97■■□□□ 1.27
PKD1-225ENST00000562297 SCAF11Q99590 1463 aaKnown RBP22.96■■□□□ 1.27
PKD1-225ENST00000562297 ERVK-7P63135 1459 aa22.95■■□□□ 1.26
PKD1-225ENST00000562297 NEXMIFQ5QGS0 1516 aa22.94■■□□□ 1.26
PKD1-225ENST00000562297 RPGRIP1LQ68CZ1 1315 aa22.94■■□□□ 1.26
PKD1-225ENST00000562297 CHGAP10645 457 aaKnown RBP22.94■■□□□ 1.26
PKD1-225ENST00000562297 TMEM131LA2VDJ0 1609 aa22.94■■□□□ 1.26
PKD1-225ENST00000562297 PIK3C2GO75747 1445 aa22.93■■□□□ 1.26
PKD1-225ENST00000562297 IDI1Q13907 227 aa22.93■■□□□ 1.26
PKD1-225ENST00000562297 SLC52A1Q9NWF4 448 aa22.93■■□□□ 1.26
PKD1-225ENST00000562297 PRKRIP1Q9H875 184 aaPredicted RBP22.92■■□□□ 1.26
PKD1-225ENST00000562297 DISP3Q9P2K9 1392 aa22.92■■□□□ 1.26
PKD1-225ENST00000562297 CFAP70Q5T0N1 1121 aa22.91■■□□□ 1.26
PKD1-225ENST00000562297 SETBP1Q9Y6X0 1596 aa22.91■■□□□ 1.26
PKD1-225ENST00000562297 POLR3GLQ9BT43 218 aa22.91■■□□□ 1.26
PKD1-225ENST00000562297 FBXO31Q5XUX0 539 aaPredicted RBP22.9■■□□□ 1.26
PKD1-225ENST00000562297 SPATA31D1Q6ZQQ2 1576 aa22.9■■□□□ 1.26
PKD1-225ENST00000562297 MLECQ14165 292 aa22.86■■□□□ 1.25
PKD1-225ENST00000562297 ADGRB1O14514 1584 aa22.86■■□□□ 1.25
PKD1-225ENST00000562297 ZFYVE9O95405 1425 aa22.84■■□□□ 1.25
PKD1-225ENST00000562297 MYO3AQ8NEV4 1616 aa22.84■■□□□ 1.25
PKD1-225ENST00000562297 C14orf93Q9H972 538 aaKnown RBP22.84■■□□□ 1.25
PKD1-225ENST00000562297 EIF3AQ14152 1382 aaKnown RBP22.83■■□□□ 1.25
PKD1-225ENST00000562297 TMF1P82094 1093 aa22.83■■□□□ 1.25
PKD1-225ENST00000562297 GTF3C3Q9Y5Q9 886 aa22.81■■□□□ 1.24
PKD1-225ENST00000562297 TRHP20396 242 aaPredicted RBP22.81■■□□□ 1.24
PKD1-225ENST00000562297 VGFO15240 615 aaPredicted RBP22.8■■□□□ 1.24
PKD1-225ENST00000562297 ZMYM3Q14202 1370 aa22.79■■□□□ 1.24
PKD1-225ENST00000562297 CCDC184Q52MB2 194 aa22.77■■□□□ 1.24
PKD1-225ENST00000562297 NUTM2DQ5VT03 806 aaPredicted RBP22.76■■□□□ 1.23
PKD1-225ENST00000562297 MYOM1P52179 1685 aa22.75■■□□□ 1.23
PKD1-225ENST00000562297 A2ML1A8K2U0 1454 aa22.75■■□□□ 1.23
PKD1-225ENST00000562297 SBNO2Q9Y2G9 1366 aa22.75■■□□□ 1.23
PKD1-225ENST00000562297 PER1O15534 1290 aaPredicted RBP22.74■■□□□ 1.23
PKD1-225ENST00000562297 KDM5AP29375 1690 aaKnown RBP22.73■■□□□ 1.23
PKD1-225ENST00000562297 ASXL1Q8IXJ9 1541 aa22.72■■□□□ 1.23
PKD1-225ENST00000562297 ARHGEF28Q8N1W1 1705 aaKnown RBP22.72■■□□□ 1.23
PKD1-225ENST00000562297 QRICH2Q9H0J4 1663 aa22.72■■□□□ 1.23
PKD1-225ENST00000562297 TMEM132EQ6IEE7 984 aa22.71■■□□□ 1.23
PKD1-225ENST00000562297 ESF1Q9H501 851 aaKnown RBP22.71■■□□□ 1.23
PKD1-225ENST00000562297 CDCA8Q53HL2 280 aa22.69■■□□□ 1.22
PKD1-225ENST00000562297 KTN1Q86UP2 1357 aaKnown RBP22.69■■□□□ 1.22
PKD1-225ENST00000562297 SLC24A1O60721 1099 aa22.68■■□□□ 1.22
PKD1-225ENST00000562297 PANK3Q9H999 370 aa22.67■■□□□ 1.22
PKD1-225ENST00000562297 CENPJQ9HC77 1338 aaPredicted RBP22.67■■□□□ 1.22
PKD1-225ENST00000562297 MRS2Q9HD23 443 aa22.67■■□□□ 1.22
PKD1-225ENST00000562297 TRAK1Q9UPV9 953 aa22.67■■□□□ 1.22
PKD1-225ENST00000562297 STAG3Q9UJ98 1225 aa22.65■■□□□ 1.22
PKD1-225ENST00000562297 ALKQ9UM73 1620 aa22.65■■□□□ 1.22
PKD1-225ENST00000562297 PARD3Q8TEW0 1356 aa22.65■■□□□ 1.22
PKD1-225ENST00000562297 TNRQ92752 1358 aa22.65■■□□□ 1.22
PKD1-225ENST00000562297 FER1L4A9Z1Z3 1794 aa22.65■■□□□ 1.22
PKD1-225ENST00000562297 SETD1AO15047 1707 aaKnown RBP22.64■■□□□ 1.21
PKD1-225ENST00000562297 RIMS2Q9UQ26 1411 aa22.64■■□□□ 1.21
PKD1-225ENST00000562297 CNGB1Q14028 1251 aaPredicted RBP22.64■■□□□ 1.21
PKD1-225ENST00000562297 UBR1Q8IWV7 1749 aa22.63■■□□□ 1.21
PKD1-225ENST00000562297 C3P01024 1663 aa22.63■■□□□ 1.21
PKD1-225ENST00000562297 RALBP1Q15311 655 aa22.63■■□□□ 1.21
PKD1-225ENST00000562297 NRXN3Q9Y4C0 1643 aa22.6■■□□□ 1.21
PKD1-225ENST00000562297 MYBBP1AQ9BQG0 1328 aaKnown RBP22.59■■□□□ 1.21
PKD1-225ENST00000562297 PTPRMP28827 1452 aa22.58■■□□□ 1.21
PKD1-225ENST00000562297 YTHDC2Q9H6S0 1430 aaKnown RBP22.57■■□□□ 1.2
PKD1-225ENST00000562297 PELP1Q8IZL8 1130 aaKnown RBP22.57■■□□□ 1.2
PKD1-225ENST00000562297 TULP4Q9NRJ4 1543 aa22.56■■□□□ 1.2
PKD1-225ENST00000562297 BRD4O60885 1362 aaPredicted RBP22.55■■□□□ 1.2
PKD1-225ENST00000562297 FAM9BQ8IZU0 186 aa22.55■■□□□ 1.2
PKD1-225ENST00000562297 SENP3Q9H4L4 574 aaPredicted RBP22.55■■□□□ 1.2
PKD1-225ENST00000562297 NLRP1Q9C000 1473 aa22.55■■□□□ 1.2
PKD1-225ENST00000562297 HNRNPUQ00839 825 aaKnown RBP eCLIP22.54■■□□□ 1.2
PKD1-225ENST00000562297 CEBPAP49715 358 aaPredicted RBP22.53■■□□□ 1.2
PKD1-225ENST00000562297 AMER1Q5JTC6 1135 aaPredicted RBP22.53■■□□□ 1.2
PKD1-225ENST00000562297 CC2D1BQ5T0F9 858 aaKnown RBP22.52■■□□□ 1.2
PKD1-225ENST00000562297 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.52■■□□□ 1.19
PKD1-225ENST00000562297 PNISRQ8TF01 805 aaKnown RBP22.52■■□□□ 1.19
PKD1-225ENST00000562297 TMEM2Q9UHN6 1383 aa22.51■■□□□ 1.19
PKD1-225ENST00000562297 NLRP13Q86W25 1043 aa22.5■■□□□ 1.19
PKD1-225ENST00000562297 STK26Q9P289 416 aa22.5■■□□□ 1.19
PKD1-225ENST00000562297 KNSTRNQ9Y448 316 aa22.5■■□□□ 1.19
PKD1-225ENST00000562297 NPC1L1Q9UHC9 1359 aa22.5■■□□□ 1.19
PKD1-225ENST00000562297 TMC1Q8TDI8 760 aa22.5■■□□□ 1.19
PKD1-225ENST00000562297 PUS7Q96PZ0 661 aaKnown RBP22.49■■□□□ 1.19
PKD1-225ENST00000562297 DLC1Q96QB1 1528 aa22.49■■□□□ 1.19
PKD1-225ENST00000562297 LRPPRCP42704 1394 aaKnown RBP22.47■■□□□ 1.19
PKD1-225ENST00000562297 EVC2Q86UK5 1308 aa22.47■■□□□ 1.19
PKD1-225ENST00000562297 CARD14Q9BXL6 1004 aa22.47■■□□□ 1.19
PKD1-225ENST00000562297 PRAM1Q96QH2 718 aa22.45■■□□□ 1.18
PKD1-225ENST00000562297 HDGFP51858 240 aaKnown RBP22.44■■□□□ 1.18
PKD1-225ENST00000562297 KNDC1Q76NI1 1749 aa22.44■■□□□ 1.18
PKD1-225ENST00000562297 SAFB2Q14151 953 aaKnown RBP eCLIP22.43■■□□□ 1.18
PKD1-225ENST00000562297 ABCC11Q96J66 1382 aa22.43■■□□□ 1.18
PKD1-225ENST00000562297 METP08581 1390 aa22.43■■□□□ 1.18
PKD1-225ENST00000562297 SLIT1O75093 1534 aa22.43■■□□□ 1.18
PKD1-225ENST00000562297 RIMS1Q86UR5 1692 aaKnown RBP22.42■■□□□ 1.18
PKD1-225ENST00000562297 ZBED9Q6R2W3 1325 aa22.42■■□□□ 1.18
PKD1-225ENST00000562297 SLC12A5Q9H2X9 1139 aa22.41■■□□□ 1.18
PKD1-225ENST00000562297 ARHGAP23Q9P227 1491 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms