RNA–Protein interactions for RNA: ENST00000561374.1

PDE8A-216, Transcript of phosphodiesterase 8A, humanhuman

TSL 4

Gene PDE8A, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-216ENST00000561374 AHDC1Q5TGY3 1603 aaPredicted RBP23.33■■□□□ 1.32
PDE8A-216ENST00000561374 AFF2P51816 1311 aa23.33■■□□□ 1.32
PDE8A-216ENST00000561374 NUTM2DQ5VT03 806 aaPredicted RBP23.31■■□□□ 1.32
PDE8A-216ENST00000561374 DUOX2Q9NRD8 1548 aa23.3■■□□□ 1.32
PDE8A-216ENST00000561374 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.29■■□□□ 1.32
PDE8A-216ENST00000561374 ADGRB3O60242 1522 aa23.28■■□□□ 1.32
PDE8A-216ENST00000561374 IDI1Q13907 227 aa23.27■■□□□ 1.32
PDE8A-216ENST00000561374 CHD2O14647 1828 aaKnown RBP23.26■■□□□ 1.31
PDE8A-216ENST00000561374 DIP2AQ14689 1571 aa23.24■■□□□ 1.31
PDE8A-216ENST00000561374 ZRANB1Q9UGI0 708 aa23.23■■□□□ 1.31
PDE8A-216ENST00000561374 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.22■■□□□ 1.31
PDE8A-216ENST00000561374 C8orf37Q96NL8 207 aa23.22■■□□□ 1.31
PDE8A-216ENST00000561374 KIF15Q9NS87 1388 aa23.22■■□□□ 1.31
PDE8A-216ENST00000561374 SETBP1Q9Y6X0 1596 aa23.22■■□□□ 1.31
PDE8A-216ENST00000561374 ATF3P18847 181 aa23.21■■□□□ 1.31
PDE8A-216ENST00000561374 RBM6P78332 1123 aaKnown RBP23.21■■□□□ 1.31
PDE8A-216ENST00000561374 CADPS2Q86UW7 1296 aa23.21■■□□□ 1.31
PDE8A-216ENST00000561374 KANK1Q14678 1352 aa23.21■■□□□ 1.31
PDE8A-216ENST00000561374 PPP1R15AO75807 674 aaPredicted RBP23.2■■□□□ 1.3
PDE8A-216ENST00000561374 QTRT2Q9H974 415 aaKnown RBP23.2■■□□□ 1.3
PDE8A-216ENST00000561374 ERBINQ96RT1 1412 aa23.19■■□□□ 1.3
PDE8A-216ENST00000561374 ATAD2Q6PL18 1390 aa23.19■■□□□ 1.3
PDE8A-216ENST00000561374 FOXD1Q16676 465 aa23.19■■□□□ 1.3
PDE8A-216ENST00000561374 NCOA3Q9Y6Q9 1424 aa23.17■■□□□ 1.3
PDE8A-216ENST00000561374 PLEKHG1Q9ULL1 1385 aa23.17■■□□□ 1.3
PDE8A-216ENST00000561374 BRINP3Q76B58 766 aa23.16■■□□□ 1.3
PDE8A-216ENST00000561374 RRP7BPQ9NSQ0 103 aa23.15■■□□□ 1.3
PDE8A-216ENST00000561374 C19orf44Q9H6X5 657 aa23.14■■□□□ 1.29
PDE8A-216ENST00000561374 MYO5BQ9ULV0 1848 aa23.14■■□□□ 1.29
PDE8A-216ENST00000561374 ASXL1Q8IXJ9 1541 aa23.13■■□□□ 1.29
PDE8A-216ENST00000561374 ZFYVE9O95405 1425 aa23.12■■□□□ 1.29
PDE8A-216ENST00000561374 NOS1P29475 1434 aa23.11■■□□□ 1.29
PDE8A-216ENST00000561374 MYOM3Q5VTT5 1437 aa23.11■■□□□ 1.29
PDE8A-216ENST00000561374 RIMS2Q9UQ26 1411 aa23.11■■□□□ 1.29
PDE8A-216ENST00000561374 LMTK2Q8IWU2 1503 aa23.11■■□□□ 1.29
PDE8A-216ENST00000561374 NGLY1Q96IV0 654 aa23.1■■□□□ 1.29
PDE8A-216ENST00000561374 CROCC2H7BZ55 1655 aa23.09■■□□□ 1.29
PDE8A-216ENST00000561374 GCC2Q8IWJ2 1684 aa23.09■■□□□ 1.29
PDE8A-216ENST00000561374 SETD5Q9C0A6 1442 aa23.09■■□□□ 1.29
PDE8A-216ENST00000561374 NHSL1Q5SYE7 1610 aa23.07■■□□□ 1.28
PDE8A-216ENST00000561374 ADAMTS2O95450 1211 aa23.06■■□□□ 1.28
PDE8A-216ENST00000561374 SLC52A1Q9NWF4 448 aa23.06■■□□□ 1.28
PDE8A-216ENST00000561374 TBX22Q9Y458 520 aa23.06■■□□□ 1.28
PDE8A-216ENST00000561374 PNPLA6Q8IY17 1366 aa23.04■■□□□ 1.28
PDE8A-216ENST00000561374 LRRC59Q96AG4 307 aaKnown RBP23.04■■□□□ 1.28
PDE8A-216ENST00000561374 HDGFP51858 240 aaKnown RBP23.03■■□□□ 1.28
PDE8A-216ENST00000561374 ADAMTS13Q76LX8 1427 aa23.01■■□□□ 1.27
PDE8A-216ENST00000561374 DDX17Q92841 729 aaKnown RBP23.01■■□□□ 1.27
PDE8A-216ENST00000561374 EP400Q96L91 3159 aa23.01■■□□□ 1.27
PDE8A-216ENST00000561374 ABCC5O15440 1437 aa23■■□□□ 1.27
PDE8A-216ENST00000561374 DCCP43146 1447 aa23■■□□□ 1.27
PDE8A-216ENST00000561374 TMEM131LA2VDJ0 1609 aa23■■□□□ 1.27
PDE8A-216ENST00000561374 CHGAP10645 457 aaKnown RBP22.99■■□□□ 1.27
PDE8A-216ENST00000561374 MST1RQ04912 1400 aa22.99■■□□□ 1.27
PDE8A-216ENST00000561374 USP21Q9UK80 565 aa22.98■■□□□ 1.27
PDE8A-216ENST00000561374 TRPM2O94759 1503 aa22.98■■□□□ 1.27
PDE8A-216ENST00000561374 TRPC5Q9UL62 973 aaPredicted RBP22.97■■□□□ 1.27
PDE8A-216ENST00000561374 PIK3R4Q99570 1358 aa22.97■■□□□ 1.27
PDE8A-216ENST00000561374 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.96■■□□□ 1.27
PDE8A-216ENST00000561374 AMOTL2Q9Y2J4 779 aa22.96■■□□□ 1.27
PDE8A-216ENST00000561374 PTPRUQ92729 1446 aa22.94■■□□□ 1.26
PDE8A-216ENST00000561374 DAPK1P53355 1430 aa22.93■■□□□ 1.26
PDE8A-216ENST00000561374 RPRD2Q5VT52 1461 aaKnown RBP22.92■■□□□ 1.26
PDE8A-216ENST00000561374 CHIC2Q9UKJ5 165 aa22.92■■□□□ 1.26
PDE8A-216ENST00000561374 ANKRD30AQ9BXX3 1397 aa22.91■■□□□ 1.26
PDE8A-216ENST00000561374 PTPN23Q9H3S7 1636 aa22.91■■□□□ 1.26
PDE8A-216ENST00000561374 CCDC125Q86Z20 511 aa22.91■■□□□ 1.26
PDE8A-216ENST00000561374 ATRNO75882 1429 aa22.91■■□□□ 1.26
PDE8A-216ENST00000561374 KANK4Q5T7N3 995 aaPredicted RBP22.9■■□□□ 1.26
PDE8A-216ENST00000561374 LRP5O75197 1615 aa22.9■■□□□ 1.26
PDE8A-216ENST00000561374 XRN1Q8IZH2 1706 aaKnown RBP22.88■■□□□ 1.25
PDE8A-216ENST00000561374 UNC13BO14795 1591 aa22.86■■□□□ 1.25
PDE8A-216ENST00000561374 PTCH1Q13635 1447 aa22.83■■□□□ 1.25
PDE8A-216ENST00000561374 ADGRL3Q9HAR2 1447 aa22.82■■□□□ 1.24
PDE8A-216ENST00000561374 FNBP4Q8N3X1 1017 aaPredicted RBP22.82■■□□□ 1.24
PDE8A-216ENST00000561374 NALCNQ8IZF0 1738 aa22.82■■□□□ 1.24
PDE8A-216ENST00000561374 BLMP54132 1417 aaPredicted RBP22.82■■□□□ 1.24
PDE8A-216ENST00000561374 DEFB132Q7Z7B7 95 aa22.81■■□□□ 1.24
PDE8A-216ENST00000561374 VPS8Q8N3P4 1428 aa22.81■■□□□ 1.24
PDE8A-216ENST00000561374 NRXN3Q9Y4C0 1643 aa22.78■■□□□ 1.24
PDE8A-216ENST00000561374 C1orf167Q5SNV9 1468 aa22.78■■□□□ 1.24
PDE8A-216ENST00000561374 SF3B2Q13435 895 aaKnown RBP22.77■■□□□ 1.24
PDE8A-216ENST00000561374 LAMC1P11047 1609 aa22.75■■□□□ 1.23
PDE8A-216ENST00000561374 BCL9LQ86UU0 1499 aa22.74■■□□□ 1.23
PDE8A-216ENST00000561374 PSDA5PKW4 1024 aaPredicted RBP22.74■■□□□ 1.23
PDE8A-216ENST00000561374 SOS2Q07890 1332 aaPredicted RBP22.74■■□□□ 1.23
PDE8A-216ENST00000561374 COL22A1Q8NFW1 1626 aaPredicted RBP22.74■■□□□ 1.23
PDE8A-216ENST00000561374 GJD4Q96KN9 370 aaPredicted RBP22.73■■□□□ 1.23
PDE8A-216ENST00000561374 E9PCH4 1651 aa22.73■■□□□ 1.23
PDE8A-216ENST00000561374 METP08581 1390 aa22.73■■□□□ 1.23
PDE8A-216ENST00000561374 ANKRD50Q9ULJ7 1429 aa22.73■■□□□ 1.23
PDE8A-216ENST00000561374 MARF1Q9Y4F3 1742 aaKnown RBP22.71■■□□□ 1.23
PDE8A-216ENST00000561374 ORAI2Q96SN7 254 aa22.71■■□□□ 1.23
PDE8A-216ENST00000561374 MYOM2P54296 1465 aa22.71■■□□□ 1.23
PDE8A-216ENST00000561374 ADGRL2O95490 1459 aa22.7■■□□□ 1.22
PDE8A-216ENST00000561374 BRWD3Q6RI45 1802 aa22.68■■□□□ 1.22
PDE8A-216ENST00000561374 GLI3P10071 1580 aa22.67■■□□□ 1.22
PDE8A-216ENST00000561374 RALGAPBQ86X10 1494 aa22.67■■□□□ 1.22
PDE8A-216ENST00000561374 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.66■■□□□ 1.22
PDE8A-216ENST00000561374 HRCP23327 699 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms