RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 CARNS1A5YM72 827 aa2.94□□□□□ -1.94
RTF1-207ENST00000561076 PALM3A6NDB9 673 aaPredicted RBP2.94□□□□□ -1.94
RTF1-207ENST00000561076 UNCXA6NJT0 531 aa2.94□□□□□ -1.94
RTF1-207ENST00000561076 PITPNM1O00562 1244 aa2.94□□□□□ -1.94
RTF1-207ENST00000561076 SOCS7O14512 581 aa2.94□□□□□ -1.94
RTF1-207ENST00000561076 EVI5O60447 810 aa2.94□□□□□ -1.94
RTF1-207ENST00000561076 ATG7O95352 703 aa2.94□□□□□ -1.94
RTF1-207ENST00000561076 USP17L8P0C7I0 530 aa2.94□□□□□ -1.94
RTF1-207ENST00000561076 ZC3H6P61129 1189 aaKnown RBP2.94□□□□□ -1.94
RTF1-207ENST00000561076 CFAP70Q5T0N1 1121 aa2.94□□□□□ -1.94
RTF1-207ENST00000561076 PPP2R2DQ66LE6 453 aa2.94□□□□□ -1.94
RTF1-207ENST00000561076 UBXN4Q92575 508 aa2.94□□□□□ -1.94
RTF1-207ENST00000561076 EPAS1Q99814 870 aa2.94□□□□□ -1.94
RTF1-207ENST00000561076 GNEQ9Y223 722 aaKnown RBP2.94□□□□□ -1.94
RTF1-207ENST00000561076 ANKRD62A6NC57 917 aa2.93□□□□□ -1.94
RTF1-207ENST00000561076 BRD2P25440 801 aaKnown RBP2.93□□□□□ -1.94
RTF1-207ENST00000561076 ITGAEP38570 1179 aa2.93□□□□□ -1.94
RTF1-207ENST00000561076 MARSP56192 900 aaKnown RBP2.93□□□□□ -1.94
RTF1-207ENST00000561076 VAC14Q08AM6 782 aa2.93□□□□□ -1.94
RTF1-207ENST00000561076 SULF1Q8IWU6 871 aa2.93□□□□□ -1.94
RTF1-207ENST00000561076 MICALL2Q8IY33 904 aa2.93□□□□□ -1.94
RTF1-207ENST00000561076 HELBQ8NG08 1087 aaPredicted RBP2.93□□□□□ -1.94
RTF1-207ENST00000561076 RBM46Q8TBY0 533 aaKnown RBP2.93□□□□□ -1.94
RTF1-207ENST00000561076 SPATA32Q96LK8 384 aa2.93□□□□□ -1.94
RTF1-207ENST00000561076 C8orf37Q96NL8 207 aa2.93□□□□□ -1.94
RTF1-207ENST00000561076 TMUB1Q9BVT8 246 aa2.93□□□□□ -1.94
RTF1-207ENST00000561076 LIMD1Q9UGP4 676 aa2.93□□□□□ -1.94
RTF1-207ENST00000561076 C2orf72A6NCS6 295 aa2.92□□□□□ -1.94
RTF1-207ENST00000561076 PRKAR2AP13861 404 aaKnown RBP2.92□□□□□ -1.94
RTF1-207ENST00000561076 ZNF16P17020 682 aaPredicted RBP2.92□□□□□ -1.94
RTF1-207ENST00000561076 EIF4G2P78344 907 aaKnown RBP eCLIP2.92□□□□□ -1.94
RTF1-207ENST00000561076 METTL3Q86U44 580 aaKnown RBP2.92□□□□□ -1.94
RTF1-207ENST00000561076 CERKQ8TCT0 537 aa2.92□□□□□ -1.94
RTF1-207ENST00000561076 NLRP7Q8WX94 980 aa2.92□□□□□ -1.94
RTF1-207ENST00000561076 CWC22Q9HCG8 908 aaKnown RBP2.92□□□□□ -1.94
RTF1-207ENST00000561076 ZRANB1Q9UGI0 708 aa2.92□□□□□ -1.94
RTF1-207ENST00000561076 SPTLC1O15269 473 aa2.91□□□□□ -1.94
RTF1-207ENST00000561076 PHF14O94880 888 aa2.91□□□□□ -1.94
RTF1-207ENST00000561076 CLSTN1O94985 981 aa2.91□□□□□ -1.94
RTF1-207ENST00000561076 EN1Q05925 392 aaPredicted RBP2.91□□□□□ -1.94
RTF1-207ENST00000561076 TUSC1Q2TAM9 212 aa2.91□□□□□ -1.94
RTF1-207ENST00000561076 FAM161AQ3B820 660 aa2.91□□□□□ -1.94
RTF1-207ENST00000561076 NAALADL2Q58DX5 795 aa2.91□□□□□ -1.94
RTF1-207ENST00000561076 RSBN1LQ6PCB5 846 aaPredicted RBP2.91□□□□□ -1.94
RTF1-207ENST00000561076 LARP1Q6PKG0 1096 aaKnown RBP2.91□□□□□ -1.94
RTF1-207ENST00000561076 NOL8Q76FK4 1167 aaKnown RBP2.91□□□□□ -1.94
RTF1-207ENST00000561076 SPIRE2Q8WWL2 714 aa2.91□□□□□ -1.94
RTF1-207ENST00000561076 L3MBTL3Q96JM7 780 aaPredicted RBP2.91□□□□□ -1.94
RTF1-207ENST00000561076 ZBTB3Q9H5J0 574 aa2.91□□□□□ -1.94
RTF1-207ENST00000561076 CDHR5Q9HBB8 845 aa2.91□□□□□ -1.94
RTF1-207ENST00000561076 RBM19Q9Y4C8 960 aaKnown RBP2.91□□□□□ -1.94
RTF1-207ENST00000561076 TMEM88BA6NKF7 163 aa2.9□□□□□ -1.95
RTF1-207ENST00000561076 DDX11L8A8MPP1 907 aa2.9□□□□□ -1.95
RTF1-207ENST00000561076 ATP9BO43861 1147 aa2.9□□□□□ -1.95
RTF1-207ENST00000561076 ERCC5P28715 1186 aaPredicted RBP2.9□□□□□ -1.95
RTF1-207ENST00000561076 TSNAXIP1Q2TAA8 658 aa2.9□□□□□ -1.95
RTF1-207ENST00000561076 ZSCAN29Q8IWY8 852 aaPredicted RBP2.9□□□□□ -1.95
RTF1-207ENST00000561076 RDH13Q8NBN7 331 aa2.9□□□□□ -1.95
RTF1-207ENST00000561076 FAM200AQ8TCP9 573 aa2.9□□□□□ -1.95
RTF1-207ENST00000561076 PXYLP1Q8TE99 480 aa2.9□□□□□ -1.95
RTF1-207ENST00000561076 PHOX2BQ99453 314 aa2.9□□□□□ -1.95
RTF1-207ENST00000561076 PSMD1Q99460 953 aa2.9□□□□□ -1.95
RTF1-207ENST00000561076 KIAA1522Q9P206 1035 aaPredicted RBP2.9□□□□□ -1.95
RTF1-207ENST00000561076 NOVA2Q9UNW9 492 aaKnown RBP2.9□□□□□ -1.95
RTF1-207ENST00000561076 BOLA1Q9Y3E2 137 aa2.9□□□□□ -1.95
RTF1-207ENST00000561076 MAFBQ9Y5Q3 323 aaPredicted RBP2.9□□□□□ -1.95
RTF1-207ENST00000561076 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP2.89□□□□□ -1.95
RTF1-207ENST00000561076 ANKRD33BA6NCL7 494 aa2.89□□□□□ -1.95
RTF1-207ENST00000561076 LILRB3O75022 631 aa2.89□□□□□ -1.95
RTF1-207ENST00000561076 ABL1P00519 1130 aa2.89□□□□□ -1.95
RTF1-207ENST00000561076 IBSPP21815 317 aaPredicted RBP2.89□□□□□ -1.95
RTF1-207ENST00000561076 MAPK1P28482 360 aa2.89□□□□□ -1.95
RTF1-207ENST00000561076 GJA5P36382 358 aa2.89□□□□□ -1.95
RTF1-207ENST00000561076 CACNB1Q02641 598 aaPredicted RBP2.89□□□□□ -1.95
RTF1-207ENST00000561076 RTL5Q5HYW3 569 aaPredicted RBP2.89□□□□□ -1.95
RTF1-207ENST00000561076 PRPF38BQ5VTL8 546 aaKnown RBP2.89□□□□□ -1.95
RTF1-207ENST00000561076 TYW1BQ6NUM6 668 aa2.89□□□□□ -1.95
RTF1-207ENST00000561076 PADI6Q6TGC4 694 aa2.89□□□□□ -1.95
RTF1-207ENST00000561076 SLAIN1Q8ND83 568 aa2.89□□□□□ -1.95
RTF1-207ENST00000561076 ADAMTS19Q8TE59 1207 aa2.89□□□□□ -1.95
RTF1-207ENST00000561076 HIRIP3Q9BW71 556 aaPredicted RBP2.89□□□□□ -1.95
RTF1-207ENST00000561076 ALG2Q9H553 416 aa2.89□□□□□ -1.95
RTF1-207ENST00000561076 TMA7Q9Y2S6 64 aaKnown RBP2.89□□□□□ -1.95
RTF1-207ENST00000561076 MOXD2PA6NHM9 499 aa2.88□□□□□ -1.95
RTF1-207ENST00000561076 SOWAHDA6NJG2 315 aa2.88□□□□□ -1.95
RTF1-207ENST00000561076 SKIP12755 728 aa2.88□□□□□ -1.95
RTF1-207ENST00000561076 NDUFV2P19404 249 aa2.88□□□□□ -1.95
RTF1-207ENST00000561076 SLC4A3P48751 1232 aa2.88□□□□□ -1.95
RTF1-207ENST00000561076 SRPK2P78362 688 aaKnown RBP2.88□□□□□ -1.95
RTF1-207ENST00000561076 GNL2Q13823 731 aaKnown RBP2.88□□□□□ -1.95
RTF1-207ENST00000561076 ELOAQ14241 798 aaKnown RBP2.88□□□□□ -1.95
RTF1-207ENST00000561076 QPCTQ16769 361 aa2.88□□□□□ -1.95
RTF1-207ENST00000561076 TMEM164Q5U3C3 297 aa2.88□□□□□ -1.95
RTF1-207ENST00000561076 TBC1D9Q6ZT07 1266 aa2.88□□□□□ -1.95
RTF1-207ENST00000561076 TXNDC2Q86VQ3 553 aa2.88□□□□□ -1.95
RTF1-207ENST00000561076 GLYCTKQ8IVS8 523 aa2.88□□□□□ -1.95
RTF1-207ENST00000561076 CABLES1Q8TDN4 633 aa2.88□□□□□ -1.95
RTF1-207ENST00000561076 ZNF592Q92610 1267 aa2.88□□□□□ -1.95
RTF1-207ENST00000561076 PHF12Q96QT6 1004 aa2.88□□□□□ -1.95
RTF1-207ENST00000561076 TANGO6Q9C0B7 1094 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms