RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 CHGAP10645 457 aaKnown RBP23.89■■□□□ 1.41
HDDC3-206ENST00000561036 IDI1Q13907 227 aa23.89■■□□□ 1.41
HDDC3-206ENST00000561036 MLECQ14165 292 aa23.88■■□□□ 1.41
HDDC3-206ENST00000561036 KIF7Q2M1P5 1343 aa23.87■■□□□ 1.41
HDDC3-206ENST00000561036 ST20-MTHFSA0A0A6YYL1 179 aa23.86■■□□□ 1.41
HDDC3-206ENST00000561036 FBXO31Q5XUX0 539 aaPredicted RBP23.85■■□□□ 1.41
HDDC3-206ENST00000561036 ZMYM3Q14202 1370 aa23.85■■□□□ 1.41
HDDC3-206ENST00000561036 ADGRF5Q8IZF2 1346 aa23.84■■□□□ 1.41
HDDC3-206ENST00000561036 ZFYVE9O95405 1425 aa23.84■■□□□ 1.41
HDDC3-206ENST00000561036 TMEM131LA2VDJ0 1609 aa23.84■■□□□ 1.41
HDDC3-206ENST00000561036 IQGAP1P46940 1657 aa23.83■■□□□ 1.41
HDDC3-206ENST00000561036 SCAF11Q99590 1463 aaKnown RBP23.83■■□□□ 1.41
HDDC3-206ENST00000561036 NEXMIFQ5QGS0 1516 aa23.83■■□□□ 1.41
HDDC3-206ENST00000561036 VGFO15240 615 aaPredicted RBP23.82■■□□□ 1.4
HDDC3-206ENST00000561036 PIK3C2GO75747 1445 aa23.82■■□□□ 1.4
HDDC3-206ENST00000561036 SETBP1Q9Y6X0 1596 aa23.82■■□□□ 1.4
HDDC3-206ENST00000561036 ANP32CO43423 234 aa23.79■■□□□ 1.4
HDDC3-206ENST00000561036 EIF3AQ14152 1382 aaKnown RBP23.78■■□□□ 1.4
HDDC3-206ENST00000561036 C14orf93Q9H972 538 aaKnown RBP23.77■■□□□ 1.4
HDDC3-206ENST00000561036 CFAP70Q5T0N1 1121 aa23.76■■□□□ 1.39
HDDC3-206ENST00000561036 SLC24A1O60721 1099 aa23.75■■□□□ 1.39
HDDC3-206ENST00000561036 TESK2Q96S53 571 aa23.75■■□□□ 1.39
HDDC3-206ENST00000561036 MYO5BQ9ULV0 1848 aa23.73■■□□□ 1.39
HDDC3-206ENST00000561036 STAG3Q9UJ98 1225 aa23.72■■□□□ 1.39
HDDC3-206ENST00000561036 TNRQ92752 1358 aa23.72■■□□□ 1.39
HDDC3-206ENST00000561036 A2ML1A8K2U0 1454 aa23.72■■□□□ 1.39
HDDC3-206ENST00000561036 KDM5AP29375 1690 aaKnown RBP23.71■■□□□ 1.39
HDDC3-206ENST00000561036 CCER2I3L3R5 266 aa23.71■■□□□ 1.39
HDDC3-206ENST00000561036 TMF1P82094 1093 aa23.7■■□□□ 1.38
HDDC3-206ENST00000561036 ADGRB1O14514 1584 aa23.69■■□□□ 1.38
HDDC3-206ENST00000561036 FER1L4A9Z1Z3 1794 aa23.67■■□□□ 1.38
HDDC3-206ENST00000561036 MYO3AQ8NEV4 1616 aa23.66■■□□□ 1.38
HDDC3-206ENST00000561036 NLRP1Q9C000 1473 aa23.65■■□□□ 1.38
HDDC3-206ENST00000561036 CDCA8Q53HL2 280 aa23.65■■□□□ 1.38
HDDC3-206ENST00000561036 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.64■■□□□ 1.37
HDDC3-206ENST00000561036 DISP3Q9P2K9 1392 aa23.64■■□□□ 1.37
HDDC3-206ENST00000561036 SBNO2Q9Y2G9 1366 aa23.64■■□□□ 1.37
HDDC3-206ENST00000561036 POLR3GLQ9BT43 218 aa23.63■■□□□ 1.37
HDDC3-206ENST00000561036 RIMS2Q9UQ26 1411 aa23.63■■□□□ 1.37
HDDC3-206ENST00000561036 HDGFP51858 240 aaKnown RBP23.62■■□□□ 1.37
HDDC3-206ENST00000561036 C3P01024 1663 aa23.62■■□□□ 1.37
HDDC3-206ENST00000561036 NUTM2DQ5VT03 806 aaPredicted RBP23.59■■□□□ 1.37
HDDC3-206ENST00000561036 UBR1Q8IWV7 1749 aa23.57■■□□□ 1.36
HDDC3-206ENST00000561036 CENPJQ9HC77 1338 aaPredicted RBP23.57■■□□□ 1.36
HDDC3-206ENST00000561036 CENPBP07199 599 aaPredicted RBP23.56■■□□□ 1.36
HDDC3-206ENST00000561036 PRKRIP1Q9H875 184 aaPredicted RBP23.56■■□□□ 1.36
HDDC3-206ENST00000561036 ALKQ9UM73 1620 aa23.55■■□□□ 1.36
HDDC3-206ENST00000561036 TMEM132EQ6IEE7 984 aa23.54■■□□□ 1.36
HDDC3-206ENST00000561036 ASXL1Q8IXJ9 1541 aa23.54■■□□□ 1.36
HDDC3-206ENST00000561036 TMEM2Q9UHN6 1383 aa23.53■■□□□ 1.36
HDDC3-206ENST00000561036 TRAK1Q9UPV9 953 aa23.53■■□□□ 1.36
HDDC3-206ENST00000561036 CEBPAP49715 358 aaPredicted RBP23.52■■□□□ 1.36
HDDC3-206ENST00000561036 KTN1Q86UP2 1357 aaKnown RBP23.52■■□□□ 1.36
HDDC3-206ENST00000561036 ADAMTSL3P82987 1691 aa23.51■■□□□ 1.35
HDDC3-206ENST00000561036 ARHGEF28Q8N1W1 1705 aaKnown RBP23.5■■□□□ 1.35
HDDC3-206ENST00000561036 QRICH2Q9H0J4 1663 aa23.5■■□□□ 1.35
HDDC3-206ENST00000561036 YTHDC2Q9H6S0 1430 aaKnown RBP23.49■■□□□ 1.35
HDDC3-206ENST00000561036 PUS7Q96PZ0 661 aaKnown RBP23.48■■□□□ 1.35
HDDC3-206ENST00000561036 YTHDC1Q96MU7 727 aaKnown RBP23.47■■□□□ 1.35
HDDC3-206ENST00000561036 SETD1AO15047 1707 aaKnown RBP23.46■■□□□ 1.35
HDDC3-206ENST00000561036 RIMS1Q86UR5 1692 aaKnown RBP23.46■■□□□ 1.35
HDDC3-206ENST00000561036 SLIT1O75093 1534 aa23.45■■□□□ 1.34
HDDC3-206ENST00000561036 DLC1Q96QB1 1528 aa23.45■■□□□ 1.34
HDDC3-206ENST00000561036 PER1O15534 1290 aaPredicted RBP23.45■■□□□ 1.34
HDDC3-206ENST00000561036 NRXN3Q9Y4C0 1643 aa23.44■■□□□ 1.34
HDDC3-206ENST00000561036 ARHGAP23Q9P227 1491 aa23.44■■□□□ 1.34
HDDC3-206ENST00000561036 LRPPRCP42704 1394 aaKnown RBP23.44■■□□□ 1.34
HDDC3-206ENST00000561036 PTPRMP28827 1452 aa23.43■■□□□ 1.34
HDDC3-206ENST00000561036 RALBP1Q15311 655 aa23.43■■□□□ 1.34
HDDC3-206ENST00000561036 THEMISQ8N1K5 641 aaPredicted RBP23.43■■□□□ 1.34
HDDC3-206ENST00000561036 PANK3Q9H999 370 aa23.43■■□□□ 1.34
HDDC3-206ENST00000561036 ABCC11Q96J66 1382 aa23.41■■□□□ 1.34
HDDC3-206ENST00000561036 PLEKHG1Q9ULL1 1385 aa23.41■■□□□ 1.34
HDDC3-206ENST00000561036 EID1Q9Y6B2 187 aa23.41■■□□□ 1.34
HDDC3-206ENST00000561036 MYOM1P52179 1685 aa23.41■■□□□ 1.34
HDDC3-206ENST00000561036 EVC2Q86UK5 1308 aa23.4■■□□□ 1.34
HDDC3-206ENST00000561036 STK26Q9P289 416 aa23.38■■□□□ 1.33
HDDC3-206ENST00000561036 SIRT1Q96EB6 747 aa23.37■■□□□ 1.33
HDDC3-206ENST00000561036 CEP170BQ9Y4F5 1589 aaPredicted RBP23.36■■□□□ 1.33
HDDC3-206ENST00000561036 TXNDC2Q86VQ3 553 aa23.36■■□□□ 1.33
HDDC3-206ENST00000561036 TECPR2O15040 1411 aa23.35■■□□□ 1.33
HDDC3-206ENST00000561036 POGKQ9P215 609 aa23.35■■□□□ 1.33
HDDC3-206ENST00000561036 PARD3Q8TEW0 1356 aa23.35■■□□□ 1.33
HDDC3-206ENST00000561036 TULP4Q9NRJ4 1543 aa23.34■■□□□ 1.33
HDDC3-206ENST00000561036 KNDC1Q76NI1 1749 aa23.34■■□□□ 1.33
HDDC3-206ENST00000561036 LTKP29376 864 aa23.34■■□□□ 1.33
HDDC3-206ENST00000561036 PRAM1Q96QH2 718 aa23.34■■□□□ 1.33
HDDC3-206ENST00000561036 NPC1L1Q9UHC9 1359 aa23.34■■□□□ 1.33
HDDC3-206ENST00000561036 ADAMTS13Q76LX8 1427 aa23.33■■□□□ 1.33
HDDC3-206ENST00000561036 ZNF142P52746 1687 aaPredicted RBP23.33■■□□□ 1.33
HDDC3-206ENST00000561036 MED14O60244 1454 aa23.33■■□□□ 1.33
HDDC3-206ENST00000561036 METP08581 1390 aa23.33■■□□□ 1.33
HDDC3-206ENST00000561036 PLPPR3Q6T4P5 718 aa23.33■■□□□ 1.33
HDDC3-206ENST00000561036 KNSTRNQ9Y448 316 aa23.33■■□□□ 1.33
HDDC3-206ENST00000561036 MYBBP1AQ9BQG0 1328 aaKnown RBP23.33■■□□□ 1.32
HDDC3-206ENST00000561036 MRS2Q9HD23 443 aa23.32■■□□□ 1.32
HDDC3-206ENST00000561036 FAM135BQ49AJ0 1406 aa23.32■■□□□ 1.32
HDDC3-206ENST00000561036 NINLQ9Y2I6 1382 aa23.31■■□□□ 1.32
HDDC3-206ENST00000561036 BCANQ96GW7 911 aa23.31■■□□□ 1.32
HDDC3-206ENST00000561036 SENP3Q9H4L4 574 aaPredicted RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms