RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 UBR1Q8IWV7 1749 aa11.43□□□□□ -0.58
GABPB1-211ENST00000561010 WASHC2CQ9Y4E1 1318 aa11.43□□□□□ -0.58
GABPB1-211ENST00000561010 IQGAP1P46940 1657 aa11.43□□□□□ -0.58
GABPB1-211ENST00000561010 FAM135AQ9P2D6 1515 aa11.42□□□□□ -0.58
GABPB1-211ENST00000561010 TSPY4P0CV99 314 aa11.42□□□□□ -0.58
GABPB1-211ENST00000561010 TSPY10P0CW01 314 aa11.42□□□□□ -0.58
GABPB1-211ENST00000561010 MNX1P50219 401 aaPredicted RBP11.42□□□□□ -0.58
GABPB1-211ENST00000561010 AMER1Q5JTC6 1135 aaPredicted RBP11.42□□□□□ -0.58
GABPB1-211ENST00000561010 MYO5BQ9ULV0 1848 aa11.42□□□□□ -0.58
GABPB1-211ENST00000561010 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.41□□□□□ -0.58
GABPB1-211ENST00000561010 SPATA31D1Q6ZQQ2 1576 aa11.41□□□□□ -0.58
GABPB1-211ENST00000561010 UGGT1Q9NYU2 1555 aa11.41□□□□□ -0.58
GABPB1-211ENST00000561010 CLCN6P51797 869 aa11.41□□□□□ -0.58
GABPB1-211ENST00000561010 RSPH4AQ5TD94 716 aa11.41□□□□□ -0.58
GABPB1-211ENST00000561010 IFNLR1Q8IU57 520 aaPredicted RBP11.41□□□□□ -0.58
GABPB1-211ENST00000561010 OTUD5Q96G74 571 aa11.41□□□□□ -0.58
GABPB1-211ENST00000561010 IQSEC2Q5JU85 1478 aa11.4□□□□□ -0.58
GABPB1-211ENST00000561010 PKD2Q13563 968 aa11.4□□□□□ -0.58
GABPB1-211ENST00000561010 DCBLD2Q96PD2 775 aa11.4□□□□□ -0.58
GABPB1-211ENST00000561010 MIA2Q96PC5 1412 aa11.4□□□□□ -0.58
GABPB1-211ENST00000561010 DUOX2Q9NRD8 1548 aa11.4□□□□□ -0.59
GABPB1-211ENST00000561010 XIRP1Q702N8 1843 aaKnown RBP11.39□□□□□ -0.59
GABPB1-211ENST00000561010 ERVK-7P63135 1459 aa11.39□□□□□ -0.59
GABPB1-211ENST00000561010 DEPDC5O75140 1603 aa11.39□□□□□ -0.59
GABPB1-211ENST00000561010 ABCC5O15440 1437 aa11.39□□□□□ -0.59
GABPB1-211ENST00000561010 VWDEQ8N2E2 1590 aa11.39□□□□□ -0.59
GABPB1-211ENST00000561010 PHF12Q96QT6 1004 aa11.39□□□□□ -0.59
GABPB1-211ENST00000561010 DISP3Q9P2K9 1392 aa11.39□□□□□ -0.59
GABPB1-211ENST00000561010 ILDR2Q71H61 639 aa11.38□□□□□ -0.59
GABPB1-211ENST00000561010 KLHL34Q8N239 644 aa11.38□□□□□ -0.59
GABPB1-211ENST00000561010 PIK3C2BO00750 1634 aa11.38□□□□□ -0.59
GABPB1-211ENST00000561010 NLRP1Q9C000 1473 aa11.38□□□□□ -0.59
GABPB1-211ENST00000561010 PRDM15P57071 1507 aaPredicted RBP11.37□□□□□ -0.59
GABPB1-211ENST00000561010 UBAP1LF5GYI3 381 aa11.37□□□□□ -0.59
GABPB1-211ENST00000561010 PELP1Q8IZL8 1130 aaKnown RBP11.37□□□□□ -0.59
GABPB1-211ENST00000561010 RRP7BPQ9NSQ0 103 aa11.37□□□□□ -0.59
GABPB1-211ENST00000561010 KIF15Q9NS87 1388 aa11.37□□□□□ -0.59
GABPB1-211ENST00000561010 DAPK1P53355 1430 aa11.36□□□□□ -0.59
GABPB1-211ENST00000561010 FGD6Q6ZV73 1430 aa11.36□□□□□ -0.59
GABPB1-211ENST00000561010 ZBTB47Q9UFB7 747 aaPredicted RBP11.35□□□□□ -0.59
GABPB1-211ENST00000561010 CHIC2Q9UKJ5 165 aa11.35□□□□□ -0.59
GABPB1-211ENST00000561010 SHANK2Q9UPX8 1470 aa11.35□□□□□ -0.59
GABPB1-211ENST00000561010 ALKQ9UM73 1620 aa11.35□□□□□ -0.59
GABPB1-211ENST00000561010 NPHP4O75161 1426 aaPredicted RBP11.35□□□□□ -0.59
GABPB1-211ENST00000561010 RTN4Q9NQC3 1192 aaKnown RBP11.34□□□□□ -0.59
GABPB1-211ENST00000561010 ANKLE2Q86XL3 938 aa11.33□□□□□ -0.6
GABPB1-211ENST00000561010 THEMISQ8N1K5 641 aaPredicted RBP11.33□□□□□ -0.6
GABPB1-211ENST00000561010 CPS1P31327 1500 aa11.33□□□□□ -0.6
GABPB1-211ENST00000561010 SYNMO15061 1565 aa11.33□□□□□ -0.6
GABPB1-211ENST00000561010 MED14O60244 1454 aa11.32□□□□□ -0.6
GABPB1-211ENST00000561010 PIP4K2BP78356 416 aa11.32□□□□□ -0.6
GABPB1-211ENST00000561010 ERBINQ96RT1 1412 aa11.32□□□□□ -0.6
GABPB1-211ENST00000561010 GCC2Q8IWJ2 1684 aa11.31□□□□□ -0.6
GABPB1-211ENST00000561010 POTEJP0CG39 1038 aa11.29□□□□□ -0.6
GABPB1-211ENST00000561010 SPOCK2Q92563 424 aa11.29□□□□□ -0.6
GABPB1-211ENST00000561010 SCAF11Q99590 1463 aaKnown RBP11.29□□□□□ -0.6
GABPB1-211ENST00000561010 LTKP29376 864 aa11.28□□□□□ -0.6
GABPB1-211ENST00000561010 HSPA1LP34931 641 aa11.28□□□□□ -0.6
GABPB1-211ENST00000561010 FAM50AQ14320 339 aaKnown RBP11.28□□□□□ -0.6
GABPB1-211ENST00000561010 SLIT1O75093 1534 aa11.28□□□□□ -0.6
GABPB1-211ENST00000561010 LRRC7Q96NW7 1537 aa11.28□□□□□ -0.6
GABPB1-211ENST00000561010 KDM5AP29375 1690 aaKnown RBP11.27□□□□□ -0.6
GABPB1-211ENST00000561010 ARHGAP23Q9P227 1491 aa11.27□□□□□ -0.6
GABPB1-211ENST00000561010 EFCAB6Q5THR3 1501 aa11.27□□□□□ -0.61
GABPB1-211ENST00000561010 MED1Q15648 1581 aaPredicted RBP11.27□□□□□ -0.61
GABPB1-211ENST00000561010 ANKRD30AQ9BXX3 1397 aa11.27□□□□□ -0.61
GABPB1-211ENST00000561010 E9PCH4 1651 aa11.27□□□□□ -0.61
GABPB1-211ENST00000561010 ARHGAP31Q2M1Z3 1444 aa11.26□□□□□ -0.61
GABPB1-211ENST00000561010 TET3O43151 1660 aa11.26□□□□□ -0.61
GABPB1-211ENST00000561010 ADGRL2O95490 1459 aa11.25□□□□□ -0.61
GABPB1-211ENST00000561010 LMTK2Q8IWU2 1503 aa11.25□□□□□ -0.61
GABPB1-211ENST00000561010 PPARGC1BQ86YN6 1023 aaKnown RBP11.25□□□□□ -0.61
GABPB1-211ENST00000561010 KANK1Q14678 1352 aa11.25□□□□□ -0.61
GABPB1-211ENST00000561010 TXNDC2Q86VQ3 553 aa11.24□□□□□ -0.61
GABPB1-211ENST00000561010 PLSCR2Q9NRY7 297 aa11.24□□□□□ -0.61
GABPB1-211ENST00000561010 ADGRB3O60242 1522 aa11.24□□□□□ -0.61
GABPB1-211ENST00000561010 UNC13BO14795 1591 aa11.24□□□□□ -0.61
GABPB1-211ENST00000561010 TOM1O60784 492 aa11.23□□□□□ -0.61
GABPB1-211ENST00000561010 CHD2O14647 1828 aaKnown RBP11.23□□□□□ -0.61
GABPB1-211ENST00000561010 IDI1Q13907 227 aa11.22□□□□□ -0.61
GABPB1-211ENST00000561010 TMEM131LA2VDJ0 1609 aa11.21□□□□□ -0.61
GABPB1-211ENST00000561010 NOS1P29475 1434 aa11.21□□□□□ -0.61
GABPB1-211ENST00000561010 ANKRD50Q9ULJ7 1429 aa11.21□□□□□ -0.61
GABPB1-211ENST00000561010 TMEM2Q9UHN6 1383 aa11.21□□□□□ -0.61
GABPB1-211ENST00000561010 MS4A3Q96HJ5 214 aa11.21□□□□□ -0.61
GABPB1-211ENST00000561010 SOCS7O14512 581 aa11.2□□□□□ -0.62
GABPB1-211ENST00000561010 RBM33Q96EV2 1170 aaKnown RBP11.2□□□□□ -0.62
GABPB1-211ENST00000561010 IQGAP3Q86VI3 1631 aa11.2□□□□□ -0.62
GABPB1-211ENST00000561010 ASTLQ6HA08 431 aaPredicted RBP11.19□□□□□ -0.62
GABPB1-211ENST00000561010 SLC26A8Q96RN1 970 aa11.19□□□□□ -0.62
GABPB1-211ENST00000561010 EID1Q9Y6B2 187 aa11.19□□□□□ -0.62
GABPB1-211ENST00000561010 ROBO1Q9Y6N7 1651 aa11.18□□□□□ -0.62
GABPB1-211ENST00000561010 ITGAEP38570 1179 aa11.18□□□□□ -0.62
GABPB1-211ENST00000561010 SPHKAPQ2M3C7 1700 aa11.18□□□□□ -0.62
GABPB1-211ENST00000561010 NWD1Q149M9 1564 aa11.17□□□□□ -0.62
GABPB1-211ENST00000561010 LCE2DQ5TA82 110 aaPredicted RBP11.17□□□□□ -0.62
GABPB1-211ENST00000561010 ATMINO43313 823 aaPredicted RBP11.16□□□□□ -0.62
GABPB1-211ENST00000561010 RPRD2Q5VT52 1461 aaKnown RBP11.15□□□□□ -0.62
GABPB1-211ENST00000561010 NUTM2DQ5VT03 806 aaPredicted RBP11.15□□□□□ -0.62
GABPB1-211ENST00000561010 ZFYVE9O95405 1425 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms