RNA–Protein interactions for RNA: ENST00000560964.1

WHAMM-202, Transcript of WAS protein homolog associated with actin, golgi membranes and microtubules, humanhuman

TSL 2

Gene WHAMM, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WHAMM-202ENST00000560964 PCDHB3Q9Y5E6 796 aa11.66□□□□□ -0.54
WHAMM-202ENST00000560964 RCCD1A6NED2 376 aa11.65□□□□□ -0.54
WHAMM-202ENST00000560964 ZPR1O75312 459 aa11.65□□□□□ -0.54
WHAMM-202ENST00000560964 SMYD5Q6GMV2 418 aa11.65□□□□□ -0.54
WHAMM-202ENST00000560964 KMT5BQ4FZB7 885 aa11.64□□□□□ -0.55
WHAMM-202ENST00000560964 NKX2-3Q8TAU0 364 aa11.64□□□□□ -0.55
WHAMM-202ENST00000560964 TMUB1Q9BVT8 246 aa11.64□□□□□ -0.55
WHAMM-202ENST00000560964 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.63□□□□□ -0.55
WHAMM-202ENST00000560964 OATP04181 439 aa11.63□□□□□ -0.55
WHAMM-202ENST00000560964 GFRA3O60609 400 aa11.62□□□□□ -0.55
WHAMM-202ENST00000560964 HIC1Q14526 733 aa11.61□□□□□ -0.55
WHAMM-202ENST00000560964 FAM161AQ3B820 660 aa11.6□□□□□ -0.55
WHAMM-202ENST00000560964 TESPA1A2RU30 521 aaPredicted RBP11.59□□□□□ -0.55
WHAMM-202ENST00000560964 ACTN4O43707 911 aaKnown RBP11.59□□□□□ -0.55
WHAMM-202ENST00000560964 BLOC1S3Q6QNY0 202 aa11.59□□□□□ -0.55
WHAMM-202ENST00000560964 NRG2O14511 850 aaPredicted RBP11.57□□□□□ -0.56
WHAMM-202ENST00000560964 CFHP08603 1231 aa11.57□□□□□ -0.56
WHAMM-202ENST00000560964 RSPH4AQ5TD94 716 aa11.57□□□□□ -0.56
WHAMM-202ENST00000560964 PXYLP1Q8TE99 480 aa11.57□□□□□ -0.56
WHAMM-202ENST00000560964 RBM26Q5T8P6 1007 aaKnown RBP11.54□□□□□ -0.56
WHAMM-202ENST00000560964 GNPATO15228 680 aa11.53□□□□□ -0.56
WHAMM-202ENST00000560964 METTL3Q86U44 580 aaKnown RBP11.53□□□□□ -0.56
WHAMM-202ENST00000560964 NR1I2O75469 434 aa11.52□□□□□ -0.57
WHAMM-202ENST00000560964 SLC10A3P09131 477 aa11.52□□□□□ -0.57
WHAMM-202ENST00000560964 TRAF7Q6Q0C0 670 aa11.52□□□□□ -0.57
WHAMM-202ENST00000560964 RNF223E7ERA6 249 aa11.5□□□□□ -0.57
WHAMM-202ENST00000560964 PDZRN3Q9UPQ7 1066 aa11.5□□□□□ -0.57
WHAMM-202ENST00000560964 TLL1O43897 1013 aa11.49□□□□□ -0.57
WHAMM-202ENST00000560964 SLC19A1P41440 591 aa11.48□□□□□ -0.57
WHAMM-202ENST00000560964 ANKLE1Q8NAG6 615 aa11.48□□□□□ -0.57
WHAMM-202ENST00000560964 ADH1BP00325 375 aa11.47□□□□□ -0.57
WHAMM-202ENST00000560964 HAP1P54257 671 aaPredicted RBP11.47□□□□□ -0.57
WHAMM-202ENST00000560964 DAXXQ9UER7 740 aaPredicted RBP11.47□□□□□ -0.57
WHAMM-202ENST00000560964 S1PR4O95977 384 aa11.45□□□□□ -0.58
WHAMM-202ENST00000560964 GPR37O15354 613 aa11.44□□□□□ -0.58
WHAMM-202ENST00000560964 FECHP22830 423 aa11.44□□□□□ -0.58
WHAMM-202ENST00000560964 SCUBE3Q8IX30 993 aa11.43□□□□□ -0.58
WHAMM-202ENST00000560964 LCE2BO14633 110 aa11.42□□□□□ -0.58
WHAMM-202ENST00000560964 RDH13Q8NBN7 331 aa11.42□□□□□ -0.58
WHAMM-202ENST00000560964 SLC6A16Q9GZN6 736 aa11.42□□□□□ -0.58
WHAMM-202ENST00000560964 SPRYD7Q5W111 196 aa11.41□□□□□ -0.58
WHAMM-202ENST00000560964 GPIHBP1Q8IV16 184 aa11.41□□□□□ -0.58
WHAMM-202ENST00000560964 SULF1Q8IWU6 871 aa11.41□□□□□ -0.58
WHAMM-202ENST00000560964 PPEF1O14829 653 aaPredicted RBP11.4□□□□□ -0.58
WHAMM-202ENST00000560964 ZNF598Q86UK7 904 aaKnown RBP11.4□□□□□ -0.58
WHAMM-202ENST00000560964 DDX11L8A8MPP1 907 aa11.39□□□□□ -0.59
WHAMM-202ENST00000560964 PUS10Q3MIT2 529 aaKnown RBP11.39□□□□□ -0.59
WHAMM-202ENST00000560964 SPSB2Q99619 263 aa11.39□□□□□ -0.59
WHAMM-202ENST00000560964 EMID1Q96A84 441 aaPredicted RBP11.38□□□□□ -0.59
WHAMM-202ENST00000560964 TULP1O00294 542 aaPredicted RBP11.36□□□□□ -0.59
WHAMM-202ENST00000560964 ATP6V1AP38606 617 aa11.36□□□□□ -0.59
WHAMM-202ENST00000560964 PRR20EP86478 221 aa11.36□□□□□ -0.59
WHAMM-202ENST00000560964 PRR20CP86479 221 aa11.36□□□□□ -0.59
WHAMM-202ENST00000560964 PRR20DP86480 221 aa11.36□□□□□ -0.59
WHAMM-202ENST00000560964 PRR20BP86481 221 aa11.36□□□□□ -0.59
WHAMM-202ENST00000560964 PRR20AP86496 221 aa11.36□□□□□ -0.59
WHAMM-202ENST00000560964 LIAT1Q6ZQX7 453 aa11.36□□□□□ -0.59
WHAMM-202ENST00000560964 TRIM67Q6ZTA4 783 aa11.36□□□□□ -0.59
WHAMM-202ENST00000560964 KDM2AQ9Y2K7 1162 aa11.36□□□□□ -0.59
WHAMM-202ENST00000560964 MORN1Q5T089 497 aa11.35□□□□□ -0.59
WHAMM-202ENST00000560964 ZNF697Q5TEC3 545 aa11.35□□□□□ -0.59
WHAMM-202ENST00000560964 GCGRP47871 477 aa11.34□□□□□ -0.59
WHAMM-202ENST00000560964 FUT2Q10981 343 aa11.34□□□□□ -0.59
WHAMM-202ENST00000560964 DGAT1O75907 488 aa11.32□□□□□ -0.6
WHAMM-202ENST00000560964 FMNL1O95466 1100 aaPredicted RBP11.32□□□□□ -0.6
WHAMM-202ENST00000560964 GRIPAP1Q4V328 841 aa11.32□□□□□ -0.6
WHAMM-202ENST00000560964 PKDCCQ504Y2 493 aa11.32□□□□□ -0.6
WHAMM-202ENST00000560964 NLRP7Q8WX94 980 aa11.32□□□□□ -0.6
WHAMM-202ENST00000560964 PHOX2BQ99453 314 aa11.32□□□□□ -0.6
WHAMM-202ENST00000560964 SALL2Q9Y467 1007 aaPredicted RBP11.31□□□□□ -0.6
WHAMM-202ENST00000560964 VSIG10Q8N0Z9 540 aa11.3□□□□□ -0.6
WHAMM-202ENST00000560964 THAP11Q96EK4 314 aa11.3□□□□□ -0.6
WHAMM-202ENST00000560964 PLA2G2CQ5R387 149 aa11.29□□□□□ -0.6
WHAMM-202ENST00000560964 ZNF787Q6DD87 383 aa11.29□□□□□ -0.6
WHAMM-202ENST00000560964 SLC27A5Q9Y2P5 690 aa11.29□□□□□ -0.6
WHAMM-202ENST00000560964 GDF9O60383 454 aa11.28□□□□□ -0.6
WHAMM-202ENST00000560964 MAP2K5Q13163 448 aa11.28□□□□□ -0.6
WHAMM-202ENST00000560964 RPIAP49247 311 aa11.27□□□□□ -0.61
WHAMM-202ENST00000560964 LMOD2Q6P5Q4 547 aa11.27□□□□□ -0.61
WHAMM-202ENST00000560964 TNFRSF10AO00220 468 aa11.25□□□□□ -0.61
WHAMM-202ENST00000560964 BRICD5Q6PL45 260 aa11.25□□□□□ -0.61
WHAMM-202ENST00000560964 CD2BP2O95400 341 aaKnown RBP11.24□□□□□ -0.61
WHAMM-202ENST00000560964 FAM160A2Q8N612 972 aaPredicted RBP11.24□□□□□ -0.61
WHAMM-202ENST00000560964 FCF1Q9Y324 198 aaKnown RBP11.24□□□□□ -0.61
WHAMM-202ENST00000560964 FAM187AA6NFU0 413 aa11.23□□□□□ -0.61
WHAMM-202ENST00000560964 IRF6O14896 467 aa11.23□□□□□ -0.61
WHAMM-202ENST00000560964 MYT1Q01538 1121 aa11.23□□□□□ -0.61
WHAMM-202ENST00000560964 Q3C1V9 767 aa11.23□□□□□ -0.61
WHAMM-202ENST00000560964 MSS51Q4VC12 460 aa11.22□□□□□ -0.61
WHAMM-202ENST00000560964 MINK1Q8N4C8 1332 aaPredicted RBP11.22□□□□□ -0.61
WHAMM-202ENST00000560964 CD46P15529 392 aa11.21□□□□□ -0.61
WHAMM-202ENST00000560964 ZBTB24O43167 697 aaPredicted RBP11.19□□□□□ -0.62
WHAMM-202ENST00000560964 FOXC1Q12948 553 aa11.19□□□□□ -0.62
WHAMM-202ENST00000560964 PKD2L1Q9P0L9 805 aa11.19□□□□□ -0.62
WHAMM-202ENST00000560964 KDM4AO75164 1064 aa11.18□□□□□ -0.62
WHAMM-202ENST00000560964 USP46P62068 366 aa11.18□□□□□ -0.62
WHAMM-202ENST00000560964 RNF19BQ6ZMZ0 732 aa11.17□□□□□ -0.62
WHAMM-202ENST00000560964 PRDM9Q9NQV7 894 aa11.17□□□□□ -0.62
WHAMM-202ENST00000560964 MDM2Q00987 491 aaPredicted RBP11.16□□□□□ -0.62
WHAMM-202ENST00000560964 CYP4X1Q8N118 509 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms