RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 MROH1Q8NDA8 1641 aa15.39■□□□□ 0.05
HERC1-210ENST00000560897 RGS12O14924 1447 aa15.39■□□□□ 0.05
HERC1-210ENST00000560897 TET3O43151 1660 aa15.38■□□□□ 0.05
HERC1-210ENST00000560897 ARHGAP31Q2M1Z3 1444 aa15.38■□□□□ 0.05
HERC1-210ENST00000560897 RBM6P78332 1123 aaKnown RBP15.38■□□□□ 0.05
HERC1-210ENST00000560897 ATAD2Q6PL18 1390 aa15.37■□□□□ 0.05
HERC1-210ENST00000560897 ATF3P18847 181 aa15.36■□□□□ 0.05
HERC1-210ENST00000560897 CADPS2Q86UW7 1296 aa15.36■□□□□ 0.05
HERC1-210ENST00000560897 MAST1Q9Y2H9 1570 aa15.36■□□□□ 0.05
HERC1-210ENST00000560897 NGLY1Q96IV0 654 aa15.34■□□□□ 0.05
HERC1-210ENST00000560897 QTRT2Q9H974 415 aaKnown RBP15.34■□□□□ 0.05
HERC1-210ENST00000560897 NCOA3Q9Y6Q9 1424 aa15.34■□□□□ 0.05
HERC1-210ENST00000560897 DUOX2Q9NRD8 1548 aa15.33■□□□□ 0.05
HERC1-210ENST00000560897 C8orf37Q96NL8 207 aa15.33■□□□□ 0.04
HERC1-210ENST00000560897 CHD2O14647 1828 aaKnown RBP15.33■□□□□ 0.04
HERC1-210ENST00000560897 PPP1R15AO75807 674 aaPredicted RBP15.32■□□□□ 0.04
HERC1-210ENST00000560897 KANK1Q14678 1352 aa15.32■□□□□ 0.04
HERC1-210ENST00000560897 IDI1Q13907 227 aa15.31■□□□□ 0.04
HERC1-210ENST00000560897 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.31■□□□□ 0.04
HERC1-210ENST00000560897 ADGRB3O60242 1522 aa15.31■□□□□ 0.04
HERC1-210ENST00000560897 SETBP1Q9Y6X0 1596 aa15.31■□□□□ 0.04
HERC1-210ENST00000560897 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.29■□□□□ 0.04
HERC1-210ENST00000560897 DIP2AQ14689 1571 aa15.29■□□□□ 0.04
HERC1-210ENST00000560897 C19orf44Q9H6X5 657 aa15.29■□□□□ 0.04
HERC1-210ENST00000560897 HDGFP51858 240 aaKnown RBP15.28■□□□□ 0.04
HERC1-210ENST00000560897 ERBINQ96RT1 1412 aa15.26■□□□□ 0.03
HERC1-210ENST00000560897 PLEKHG1Q9ULL1 1385 aa15.26■□□□□ 0.03
HERC1-210ENST00000560897 BRINP3Q76B58 766 aa15.26■□□□□ 0.03
HERC1-210ENST00000560897 LRRC59Q96AG4 307 aaKnown RBP15.25■□□□□ 0.03
HERC1-210ENST00000560897 SETD5Q9C0A6 1442 aa15.25■□□□□ 0.03
HERC1-210ENST00000560897 KIF15Q9NS87 1388 aa15.24■□□□□ 0.03
HERC1-210ENST00000560897 CCDC125Q86Z20 511 aa15.24■□□□□ 0.03
HERC1-210ENST00000560897 SLC52A1Q9NWF4 448 aa15.24■□□□□ 0.03
HERC1-210ENST00000560897 ASXL1Q8IXJ9 1541 aa15.23■□□□□ 0.03
HERC1-210ENST00000560897 TBX22Q9Y458 520 aa15.22■□□□□ 0.03
HERC1-210ENST00000560897 ADAMTS2O95450 1211 aa15.21■□□□□ 0.03
HERC1-210ENST00000560897 TRPC5Q9UL62 973 aaPredicted RBP15.21■□□□□ 0.03
HERC1-210ENST00000560897 NHSL1Q5SYE7 1610 aa15.21■□□□□ 0.02
HERC1-210ENST00000560897 RIMS2Q9UQ26 1411 aa15.2■□□□□ 0.02
HERC1-210ENST00000560897 LMTK2Q8IWU2 1503 aa15.2■□□□□ 0.02
HERC1-210ENST00000560897 ZFYVE9O95405 1425 aa15.19■□□□□ 0.02
HERC1-210ENST00000560897 NOS1P29475 1434 aa15.19■□□□□ 0.02
HERC1-210ENST00000560897 DCCP43146 1447 aa15.19■□□□□ 0.02
HERC1-210ENST00000560897 MYOM3Q5VTT5 1437 aa15.19■□□□□ 0.02
HERC1-210ENST00000560897 RRP7BPQ9NSQ0 103 aa15.19■□□□□ 0.02
HERC1-210ENST00000560897 USP21Q9UK80 565 aa15.19■□□□□ 0.02
HERC1-210ENST00000560897 PNPLA6Q8IY17 1366 aa15.19■□□□□ 0.02
HERC1-210ENST00000560897 PIK3R4Q99570 1358 aa15.19■□□□□ 0.02
HERC1-210ENST00000560897 MYO5BQ9ULV0 1848 aa15.18■□□□□ 0.02
HERC1-210ENST00000560897 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.18■□□□□ 0.02
HERC1-210ENST00000560897 GCC2Q8IWJ2 1684 aa15.17■□□□□ 0.02
HERC1-210ENST00000560897 LRP5O75197 1615 aa15.16■□□□□ 0.02
HERC1-210ENST00000560897 TRPM2O94759 1503 aa15.15■□□□□ 0.02
HERC1-210ENST00000560897 EP400Q96L91 3159 aa15.14■□□□□ 0.01
HERC1-210ENST00000560897 CHGAP10645 457 aaKnown RBP15.14■□□□□ 0.01
HERC1-210ENST00000560897 CROCC2H7BZ55 1655 aa15.13■□□□□ 0.01
HERC1-210ENST00000560897 MST1RQ04912 1400 aa15.13■□□□□ 0.01
HERC1-210ENST00000560897 SF3B2Q13435 895 aaKnown RBP15.13■□□□□ 0.01
HERC1-210ENST00000560897 AMOTL2Q9Y2J4 779 aa15.13■□□□□ 0.01
HERC1-210ENST00000560897 ADAMTS13Q76LX8 1427 aa15.12■□□□□ 0.01
HERC1-210ENST00000560897 ATRNO75882 1429 aa15.11■□□□□ 0.01
HERC1-210ENST00000560897 RPRD2Q5VT52 1461 aaKnown RBP15.11■□□□□ 0.01
HERC1-210ENST00000560897 TMEM131LA2VDJ0 1609 aa15.1■□□□□ 0.01
HERC1-210ENST00000560897 BLMP54132 1417 aaPredicted RBP15.1■□□□□ 0.01
HERC1-210ENST00000560897 PTCH1Q13635 1447 aa15.1■□□□□ 0.01
HERC1-210ENST00000560897 DDX17Q92841 729 aaKnown RBP15.1■□□□□ 0.01
HERC1-210ENST00000560897 FNBP4Q8N3X1 1017 aaPredicted RBP15.09■□□□□ 0.01
HERC1-210ENST00000560897 ANKRD30AQ9BXX3 1397 aa15.08■□□□□ 0
HERC1-210ENST00000560897 ABCC5O15440 1437 aa15.08■□□□□ 0
HERC1-210ENST00000560897 DEFB132Q7Z7B7 95 aa15.05■□□□□ -0
HERC1-210ENST00000560897 PTPRUQ92729 1446 aa15.05■□□□□ -0
HERC1-210ENST00000560897 DAPK1P53355 1430 aa15.04■□□□□ -0
HERC1-210ENST00000560897 XRN1Q8IZH2 1706 aaKnown RBP15.03■□□□□ -0
HERC1-210ENST00000560897 ADGRL3Q9HAR2 1447 aa15.03■□□□□ -0
HERC1-210ENST00000560897 GJD4Q96KN9 370 aaPredicted RBP15.03■□□□□ -0
HERC1-210ENST00000560897 CHIC2Q9UKJ5 165 aa15.02■□□□□ -0
HERC1-210ENST00000560897 PTPN23Q9H3S7 1636 aa15.02□□□□□ -0.01
HERC1-210ENST00000560897 UNC13BO14795 1591 aa15.02□□□□□ -0.01
HERC1-210ENST00000560897 PSDA5PKW4 1024 aaPredicted RBP15.01□□□□□ -0.01
HERC1-210ENST00000560897 SOS2Q07890 1332 aaPredicted RBP15□□□□□ -0.01
HERC1-210ENST00000560897 YY1P25490 414 aa15□□□□□ -0.01
HERC1-210ENST00000560897 C1orf167Q5SNV9 1468 aa15□□□□□ -0.01
HERC1-210ENST00000560897 HRCP23327 699 aa14.99□□□□□ -0.01
HERC1-210ENST00000560897 NALCNQ8IZF0 1738 aa14.99□□□□□ -0.01
HERC1-210ENST00000560897 BCL9LQ86UU0 1499 aa14.99□□□□□ -0.01
HERC1-210ENST00000560897 LAMC1P11047 1609 aa14.99□□□□□ -0.01
HERC1-210ENST00000560897 COL22A1Q8NFW1 1626 aaPredicted RBP14.99□□□□□ -0.01
HERC1-210ENST00000560897 MARF1Q9Y4F3 1742 aaKnown RBP14.98□□□□□ -0.01
HERC1-210ENST00000560897 SPHKAPQ2M3C7 1700 aa14.97□□□□□ -0.01
HERC1-210ENST00000560897 BAG6P46379 1132 aa14.97□□□□□ -0.01
HERC1-210ENST00000560897 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.96□□□□□ -0.01
HERC1-210ENST00000560897 MYOM2P54296 1465 aa14.95□□□□□ -0.02
HERC1-210ENST00000560897 BRWD3Q6RI45 1802 aa14.95□□□□□ -0.02
HERC1-210ENST00000560897 KANK4Q5T7N3 995 aaPredicted RBP14.95□□□□□ -0.02
HERC1-210ENST00000560897 RALGAPBQ86X10 1494 aa14.95□□□□□ -0.02
HERC1-210ENST00000560897 UNC5CLQ8IV45 518 aa14.94□□□□□ -0.02
HERC1-210ENST00000560897 ORAI2Q96SN7 254 aa14.94□□□□□ -0.02
HERC1-210ENST00000560897 NRXN3Q9Y4C0 1643 aa14.94□□□□□ -0.02
HERC1-210ENST00000560897 VPS8Q8N3P4 1428 aa14.93□□□□□ -0.02
HERC1-210ENST00000560897 ANKRD50Q9ULJ7 1429 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms