RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 INO80Q9ULG1 1556 aaPredicted RBP11.08□□□□□ -0.64
HERC1-208ENST00000560462 NCOA2Q15596 1464 aa11.07□□□□□ -0.64
HERC1-208ENST00000560462 ATP1B4Q9UN42 357 aaPredicted RBP11.07□□□□□ -0.64
HERC1-208ENST00000560462 ARHGAP23Q9P227 1491 aa11.06□□□□□ -0.64
HERC1-208ENST00000560462 SLIT1O75093 1534 aa11.06□□□□□ -0.64
HERC1-208ENST00000560462 SYCP2Q9BX26 1530 aa11.06□□□□□ -0.64
HERC1-208ENST00000560462 KDM5AP29375 1690 aaKnown RBP11.06□□□□□ -0.64
HERC1-208ENST00000560462 ADAMTS2O95450 1211 aa11.05□□□□□ -0.64
HERC1-208ENST00000560462 HNRNPMP52272 730 aaKnown RBP eCLIP11.05□□□□□ -0.64
HERC1-208ENST00000560462 ZNF777Q9ULD5 760 aaPredicted RBP11.05□□□□□ -0.64
HERC1-208ENST00000560462 ATRNO75882 1429 aa11.04□□□□□ -0.64
HERC1-208ENST00000560462 SETD5Q9C0A6 1442 aa11.04□□□□□ -0.64
HERC1-208ENST00000560462 R3HDM1Q15032 1099 aaKnown RBP11.04□□□□□ -0.64
HERC1-208ENST00000560462 ADGBQ8N7X0 1667 aa11.04□□□□□ -0.64
HERC1-208ENST00000560462 UBR1Q8IWV7 1749 aa11.04□□□□□ -0.64
HERC1-208ENST00000560462 LRRC59Q96AG4 307 aaKnown RBP11.03□□□□□ -0.64
HERC1-208ENST00000560462 SLC26A8Q96RN1 970 aa11.03□□□□□ -0.64
HERC1-208ENST00000560462 PCDH10Q9P2E7 1040 aa11.03□□□□□ -0.64
HERC1-208ENST00000560462 KIF3BO15066 747 aa11.02□□□□□ -0.65
HERC1-208ENST00000560462 CADPS2Q86UW7 1296 aa11.02□□□□□ -0.65
HERC1-208ENST00000560462 BRINP3Q76B58 766 aa11.01□□□□□ -0.65
HERC1-208ENST00000560462 C14orf37Q86TY3 774 aa11.01□□□□□ -0.65
HERC1-208ENST00000560462 PNPLA6Q8IY17 1366 aa11.01□□□□□ -0.65
HERC1-208ENST00000560462 UNC13BO14795 1591 aa11□□□□□ -0.65
HERC1-208ENST00000560462 ATF3P18847 181 aa11□□□□□ -0.65
HERC1-208ENST00000560462 BAG6P46379 1132 aa11□□□□□ -0.65
HERC1-208ENST00000560462 FNBP4Q8N3X1 1017 aaPredicted RBP11□□□□□ -0.65
HERC1-208ENST00000560462 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11□□□□□ -0.65
HERC1-208ENST00000560462 DHX29Q7Z478 1369 aaKnown RBP11□□□□□ -0.65
HERC1-208ENST00000560462 RTEL1-TNFRSF6BF6WH68 1400 aa11□□□□□ -0.65
HERC1-208ENST00000560462 MAST1Q9Y2H9 1570 aa10.99□□□□□ -0.65
HERC1-208ENST00000560462 NCOA3Q9Y6Q9 1424 aa10.98□□□□□ -0.65
HERC1-208ENST00000560462 ERVK-7P63135 1459 aa10.98□□□□□ -0.65
HERC1-208ENST00000560462 GIGYF1O75420 1035 aaPredicted RBP10.97□□□□□ -0.65
HERC1-208ENST00000560462 PPP1R1BQ9UD71 204 aaPredicted RBP10.97□□□□□ -0.65
HERC1-208ENST00000560462 TMEM2Q9UHN6 1383 aa10.97□□□□□ -0.65
HERC1-208ENST00000560462 NINLQ9Y2I6 1382 aa10.97□□□□□ -0.65
HERC1-208ENST00000560462 KIAA1107Q9UPP5 1409 aa10.97□□□□□ -0.65
HERC1-208ENST00000560462 GJD4Q96KN9 370 aaPredicted RBP10.96□□□□□ -0.65
HERC1-208ENST00000560462 TET3O43151 1660 aa10.95□□□□□ -0.66
HERC1-208ENST00000560462 MROH1Q8NDA8 1641 aa10.95□□□□□ -0.66
HERC1-208ENST00000560462 CAPN15O75808 1086 aa10.95□□□□□ -0.66
HERC1-208ENST00000560462 C19orf44Q9H6X5 657 aa10.95□□□□□ -0.66
HERC1-208ENST00000560462 CDC42BPAQ5VT25 1732 aa10.95□□□□□ -0.66
HERC1-208ENST00000560462 ASXL1Q8IXJ9 1541 aa10.94□□□□□ -0.66
HERC1-208ENST00000560462 GPATCH8Q9UKJ3 1502 aaKnown RBP10.94□□□□□ -0.66
HERC1-208ENST00000560462 PLEKHH2Q8IVE3 1493 aa10.94□□□□□ -0.66
HERC1-208ENST00000560462 UTRNP46939 3433 aa10.94□□□□□ -0.66
HERC1-208ENST00000560462 SAMD1Q6SPF0 538 aaPredicted RBP10.93□□□□□ -0.66
HERC1-208ENST00000560462 PTCH1Q13635 1447 aa10.92□□□□□ -0.66
HERC1-208ENST00000560462 CAMSAP2Q08AD1 1489 aa10.92□□□□□ -0.66
HERC1-208ENST00000560462 ARHGAP35Q9NRY4 1499 aa10.92□□□□□ -0.66
HERC1-208ENST00000560462 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.92□□□□□ -0.66
HERC1-208ENST00000560462 FMN1Q68DA7 1419 aa10.92□□□□□ -0.66
HERC1-208ENST00000560462 EN1Q05925 392 aaPredicted RBP10.91□□□□□ -0.66
HERC1-208ENST00000560462 BCANQ96GW7 911 aa10.91□□□□□ -0.66
HERC1-208ENST00000560462 ATF5Q9Y2D1 282 aaPredicted RBP10.91□□□□□ -0.66
HERC1-208ENST00000560462 SPHKAPQ2M3C7 1700 aa10.91□□□□□ -0.66
HERC1-208ENST00000560462 RALGAPBQ86X10 1494 aa10.91□□□□□ -0.66
HERC1-208ENST00000560462 CAMTA1Q9Y6Y1 1673 aa10.91□□□□□ -0.66
HERC1-208ENST00000560462 STAG3Q9UJ98 1225 aa10.9□□□□□ -0.66
HERC1-208ENST00000560462 DDX17Q92841 729 aaKnown RBP10.88□□□□□ -0.67
HERC1-208ENST00000560462 SPON1Q9HCB6 807 aa10.88□□□□□ -0.67
HERC1-208ENST00000560462 PRELPP51888 382 aa10.87□□□□□ -0.67
HERC1-208ENST00000560462 SEPT12Q8IYM1 358 aa10.87□□□□□ -0.67
HERC1-208ENST00000560462 CFDP1Q9UEE9 299 aaPredicted RBP10.87□□□□□ -0.67
HERC1-208ENST00000560462 KRT27Q7Z3Y8 459 aa10.86□□□□□ -0.67
HERC1-208ENST00000560462 EFCAB6Q5THR3 1501 aa10.85□□□□□ -0.67
HERC1-208ENST00000560462 BRWD3Q6RI45 1802 aa10.85□□□□□ -0.67
HERC1-208ENST00000560462 GLI3P10071 1580 aa10.85□□□□□ -0.67
HERC1-208ENST00000560462 PIK3C2BO00750 1634 aa10.84□□□□□ -0.67
HERC1-208ENST00000560462 CHD2O14647 1828 aaKnown RBP10.84□□□□□ -0.67
HERC1-208ENST00000560462 PPP1R15AO75807 674 aaPredicted RBP10.84□□□□□ -0.67
HERC1-208ENST00000560462 DCCP43146 1447 aa10.84□□□□□ -0.67
HERC1-208ENST00000560462 KCNQ2O43526 872 aa10.83□□□□□ -0.68
HERC1-208ENST00000560462 MST1RQ04912 1400 aa10.82□□□□□ -0.68
HERC1-208ENST00000560462 EZH2Q15910 746 aaKnown RBP10.81□□□□□ -0.68
HERC1-208ENST00000560462 DISP2A7MBM2 1401 aa10.81□□□□□ -0.68
HERC1-208ENST00000560462 LRRIQ1Q96JM4 1722 aa10.81□□□□□ -0.68
HERC1-208ENST00000560462 HSPA6P17066 643 aa10.8□□□□□ -0.68
HERC1-208ENST00000560462 UNC5CLQ8IV45 518 aa10.8□□□□□ -0.68
HERC1-208ENST00000560462 FBXO3Q9UK99 471 aa10.8□□□□□ -0.68
HERC1-208ENST00000560462 MBD5Q9P267 1494 aa10.8□□□□□ -0.68
HERC1-208ENST00000560462 COL13A1Q5TAT6 717 aaPredicted RBP10.79□□□□□ -0.68
HERC1-208ENST00000560462 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.78□□□□□ -0.68
HERC1-208ENST00000560462 CHD4Q14839 1912 aa10.78□□□□□ -0.68
HERC1-208ENST00000560462 TNS4Q8IZW8 715 aa10.78□□□□□ -0.68
HERC1-208ENST00000560462 CCDC18Q5T9S5 1454 aa10.78□□□□□ -0.68
HERC1-208ENST00000560462 ZNF644Q9H582 1327 aaPredicted RBP10.78□□□□□ -0.68
HERC1-208ENST00000560462 RGPD1P0DJD0 1748 aa10.78□□□□□ -0.68
HERC1-208ENST00000560462 CFAP65Q6ZU64 1925 aaKnown RBP10.78□□□□□ -0.68
HERC1-208ENST00000560462 PLEKHG1Q9ULL1 1385 aa10.77□□□□□ -0.68
HERC1-208ENST00000560462 MYOM2P54296 1465 aa10.77□□□□□ -0.69
HERC1-208ENST00000560462 TBX22Q9Y458 520 aa10.77□□□□□ -0.69
HERC1-208ENST00000560462 CCNB3Q8WWL7 1395 aa10.77□□□□□ -0.69
HERC1-208ENST00000560462 ONECUT3O60422 494 aaPredicted RBP10.76□□□□□ -0.69
HERC1-208ENST00000560462 NBPF8Q3BBV2 869 aa10.76□□□□□ -0.69
HERC1-208ENST00000560462 NBPF14Q5TI25 921 aa10.76□□□□□ -0.69
HERC1-208ENST00000560462 CAMKK2Q96RR4 588 aa10.76□□□□□ -0.69
HERC1-208ENST00000560462 U3KPZ7 1027 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms