RNA–Protein interactions for RNA: ENST00000560220.5

KNSTRN-209, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 5

Gene KNSTRN, Length 903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-209ENST00000560220 BRINP3Q76B58 766 aa16.51■□□□□ 0.23
KNSTRN-209ENST00000560220 SLC34A2O95436 690 aa16.5■□□□□ 0.23
KNSTRN-209ENST00000560220 FNBP4Q8N3X1 1017 aaPredicted RBP16.48■□□□□ 0.23
KNSTRN-209ENST00000560220 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.48■□□□□ 0.231e-6■■□□□ 12.2
KNSTRN-209ENST00000560220 KIAA1107Q9UPP5 1409 aa16.47■□□□□ 0.23
KNSTRN-209ENST00000560220 BAG6P46379 1132 aa16.47■□□□□ 0.23
KNSTRN-209ENST00000560220 PNPLA6Q8IY17 1366 aa16.47■□□□□ 0.23
KNSTRN-209ENST00000560220 ERVK-7P63135 1459 aa16.47■□□□□ 0.23
KNSTRN-209ENST00000560220 MAST1Q9Y2H9 1570 aa16.45■□□□□ 0.22
KNSTRN-209ENST00000560220 TET3O43151 1660 aa16.45■□□□□ 0.22
KNSTRN-209ENST00000560220 NCOA3Q9Y6Q9 1424 aa16.45■□□□□ 0.22
KNSTRN-209ENST00000560220 PLEKHH2Q8IVE3 1493 aa16.44■□□□□ 0.22
KNSTRN-209ENST00000560220 TMEM2Q9UHN6 1383 aa16.44■□□□□ 0.22
KNSTRN-209ENST00000560220 BCANQ96GW7 911 aa16.44■□□□□ 0.22
KNSTRN-209ENST00000560220 C19orf44Q9H6X5 657 aa16.44■□□□□ 0.22
KNSTRN-209ENST00000560220 UNC13BO14795 1591 aa16.43■□□□□ 0.22
KNSTRN-209ENST00000560220 GJD4Q96KN9 370 aaPredicted RBP16.43■□□□□ 0.22
KNSTRN-209ENST00000560220 RTEL1-TNFRSF6BF6WH68 1400 aa16.43■□□□□ 0.22
KNSTRN-209ENST00000560220 CEP350Q5VT06 3117 aa16.43■□□□□ 0.22
KNSTRN-209ENST00000560220 PPP1R1BQ9UD71 204 aaPredicted RBP16.42■□□□□ 0.22
KNSTRN-209ENST00000560220 FMN1Q68DA7 1419 aa16.42■□□□□ 0.22
KNSTRN-209ENST00000560220 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.42■□□□□ 0.22
KNSTRN-209ENST00000560220 MROH1Q8NDA8 1641 aa16.41■□□□□ 0.22
KNSTRN-209ENST00000560220 STAG3Q9UJ98 1225 aa16.41■□□□□ 0.22
KNSTRN-209ENST00000560220 PCDH10Q9P2E7 1040 aa16.39■□□□□ 0.21
KNSTRN-209ENST00000560220 ASXL1Q8IXJ9 1541 aa16.39■□□□□ 0.21
KNSTRN-209ENST00000560220 GPATCH8Q9UKJ3 1502 aaKnown RBP16.39■□□□□ 0.21
KNSTRN-209ENST00000560220 CFAP65Q6ZU64 1925 aaKnown RBP16.38■□□□□ 0.21
KNSTRN-209ENST00000560220 GIGYF1O75420 1035 aaPredicted RBP16.37■□□□□ 0.21
KNSTRN-209ENST00000560220 CFDP1Q9UEE9 299 aaPredicted RBP16.37■□□□□ 0.21
KNSTRN-209ENST00000560220 CSRNP3Q8WYN3 585 aa16.36■□□□□ 0.21
KNSTRN-209ENST00000560220 PCGF6Q9BYE7 350 aa16.36■□□□□ 0.21
KNSTRN-209ENST00000560220 NINLQ9Y2I6 1382 aa16.36■□□□□ 0.21
KNSTRN-209ENST00000560220 PTCH1Q13635 1447 aa16.36■□□□□ 0.21
KNSTRN-209ENST00000560220 CHD2O14647 1828 aaKnown RBP16.35■□□□□ 0.21
KNSTRN-209ENST00000560220 CAPN15O75808 1086 aa16.35■□□□□ 0.21
KNSTRN-209ENST00000560220 EN1Q05925 392 aaPredicted RBP16.35■□□□□ 0.21
KNSTRN-209ENST00000560220 ARHGAP35Q9NRY4 1499 aa16.35■□□□□ 0.21
KNSTRN-209ENST00000560220 CAMTA1Q9Y6Y1 1673 aa16.34■□□□□ 0.21
KNSTRN-209ENST00000560220 LRRIQ1Q96JM4 1722 aa16.34■□□□□ 0.21
KNSTRN-209ENST00000560220 DDX17Q92841 729 aaKnown RBP16.34■□□□□ 0.21
KNSTRN-209ENST00000560220 SPHKAPQ2M3C7 1700 aa16.33■□□□□ 0.21
KNSTRN-209ENST00000560220 BRWD3Q6RI45 1802 aa16.33■□□□□ 0.21
KNSTRN-209ENST00000560220 CAMSAP2Q08AD1 1489 aa16.32■□□□□ 0.2
KNSTRN-209ENST00000560220 PIK3C2BO00750 1634 aa16.3■□□□□ 0.2
KNSTRN-209ENST00000560220 PPP1R15AO75807 674 aaPredicted RBP16.3■□□□□ 0.2
KNSTRN-209ENST00000560220 RALGAPBQ86X10 1494 aa16.29■□□□□ 0.2
KNSTRN-209ENST00000560220 SEPT12Q8IYM1 358 aa16.29■□□□□ 0.2
KNSTRN-209ENST00000560220 EFCAB6Q5THR3 1501 aa16.28■□□□□ 0.2
KNSTRN-209ENST00000560220 TRIM26Q12899 539 aaPredicted RBP16.27■□□□□ 0.2
KNSTRN-209ENST00000560220 KRT27Q7Z3Y8 459 aa16.27■□□□□ 0.2
KNSTRN-209ENST00000560220 SPON1Q9HCB6 807 aa16.27■□□□□ 0.2
KNSTRN-209ENST00000560220 GLI3P10071 1580 aa16.25■□□□□ 0.19
KNSTRN-209ENST00000560220 CHD4Q14839 1912 aa16.23■□□□□ 0.19
KNSTRN-209ENST00000560220 MBD5Q9P267 1494 aa16.22■□□□□ 0.19
KNSTRN-209ENST00000560220 ZNF644Q9H582 1327 aaPredicted RBP16.22■□□□□ 0.19
KNSTRN-209ENST00000560220 MST1RQ04912 1400 aa16.22■□□□□ 0.19
KNSTRN-209ENST00000560220 KCNQ2O43526 872 aa16.22■□□□□ 0.19
KNSTRN-209ENST00000560220 EZH2Q15910 746 aaKnown RBP16.22■□□□□ 0.19
KNSTRN-209ENST00000560220 CCDC18Q5T9S5 1454 aa16.22■□□□□ 0.19
KNSTRN-209ENST00000560220 DCCP43146 1447 aa16.21■□□□□ 0.19
KNSTRN-209ENST00000560220 UNC5CLQ8IV45 518 aa16.21■□□□□ 0.19
KNSTRN-209ENST00000560220 CCNB3Q8WWL7 1395 aa16.21■□□□□ 0.19
KNSTRN-209ENST00000560220 PRELPP51888 382 aa16.2■□□□□ 0.18
KNSTRN-209ENST00000560220 CEP152O94986 1710 aa16.19■□□□□ 0.18
KNSTRN-209ENST00000560220 IDI1Q13907 227 aa16.19■□□□□ 0.18
KNSTRN-209ENST00000560220 TBX22Q9Y458 520 aa16.19■□□□□ 0.18
KNSTRN-209ENST00000560220 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.18■□□□□ 0.18
KNSTRN-209ENST00000560220 UTRNP46939 3433 aa16.18■□□□□ 0.18
KNSTRN-209ENST00000560220 RGPD1P0DJD0 1748 aa16.17■□□□□ 0.18
KNSTRN-209ENST00000560220 PLEKHG1Q9ULL1 1385 aa16.16■□□□□ 0.18
KNSTRN-209ENST00000560220 UBTFP17480 764 aaKnown RBP16.16■□□□□ 0.18
KNSTRN-209ENST00000560220 MARF1Q9Y4F3 1742 aaKnown RBP16.15■□□□□ 0.18
KNSTRN-209ENST00000560220 DISP2A7MBM2 1401 aa16.14■□□□□ 0.17
KNSTRN-209ENST00000560220 ARHGAP31Q2M1Z3 1444 aa16.14■□□□□ 0.17
KNSTRN-209ENST00000560220 ONECUT3O60422 494 aaPredicted RBP16.14■□□□□ 0.17
KNSTRN-209ENST00000560220 NBPF8Q3BBV2 869 aa16.14■□□□□ 0.17
KNSTRN-209ENST00000560220 NBPF14Q5TI25 921 aa16.14■□□□□ 0.17
KNSTRN-209ENST00000560220 SOS2Q07890 1332 aaPredicted RBP16.14■□□□□ 0.17
KNSTRN-209ENST00000560220 COL22A1Q8NFW1 1626 aaPredicted RBP16.12■□□□□ 0.17
KNSTRN-209ENST00000560220 A0A0G2JS52 829 aa16.12■□□□□ 0.17
KNSTRN-209ENST00000560220 HSPA6P17066 643 aa16.12■□□□□ 0.17
KNSTRN-209ENST00000560220 MYT1Q01538 1121 aa16.12■□□□□ 0.17
KNSTRN-209ENST00000560220 CAMKK2Q96RR4 588 aa16.12■□□□□ 0.17
KNSTRN-209ENST00000560220 HDGFP51858 240 aaKnown RBP16.11■□□□□ 0.17
KNSTRN-209ENST00000560220 MYOM2P54296 1465 aa16.1■□□□□ 0.17
KNSTRN-209ENST00000560220 COL13A1Q5TAT6 717 aaPredicted RBP16.1■□□□□ 0.17
KNSTRN-209ENST00000560220 AMOTL2Q9Y2J4 779 aa16.1■□□□□ 0.17
KNSTRN-209ENST00000560220 CCDC9Q9Y3X0 531 aaKnown RBP16.1■□□□□ 0.17
KNSTRN-209ENST00000560220 CCDC141Q6ZP82 1450 aa16.1■□□□□ 0.17
KNSTRN-209ENST00000560220 PIK3R4Q99570 1358 aa16.09■□□□□ 0.17
KNSTRN-209ENST00000560220 RSPH4AQ5TD94 716 aa16.08■□□□□ 0.16
KNSTRN-209ENST00000560220 TNS4Q8IZW8 715 aa16.08■□□□□ 0.16
KNSTRN-209ENST00000560220 FAM83GA6ND36 823 aa16.07■□□□□ 0.16
KNSTRN-209ENST00000560220 VPS72Q15906 364 aa16.07■□□□□ 0.16
KNSTRN-209ENST00000560220 MTUS2Q5JR59 1369 aa16.07■□□□□ 0.16
KNSTRN-209ENST00000560220 ADGRB3O60242 1522 aa16.07■□□□□ 0.16
KNSTRN-209ENST00000560220 SLIT2O94813 1529 aa16.07■□□□□ 0.16
KNSTRN-209ENST00000560220 TSPY4P0CV99 314 aa16.06■□□□□ 0.16
KNSTRN-209ENST00000560220 TSPY10P0CW01 314 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms