RNA–Protein interactions for RNA: ENST00000559793.5

CTDSPL2-208, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-208ENST00000559793 ITSN2Q9NZM3 1697 aa13.15□□□□□ -0.3
CTDSPL2-208ENST00000559793 MFRPQ9BY79 579 aa13.15□□□□□ -0.3
CTDSPL2-208ENST00000559793 CDC42BPAQ5VT25 1732 aa13.15□□□□□ -0.3
CTDSPL2-208ENST00000559793 DISP3Q9P2K9 1392 aa13.15□□□□□ -0.3
CTDSPL2-208ENST00000559793 NLRP6P59044 892 aa13.14□□□□□ -0.31
CTDSPL2-208ENST00000559793 DPY19L2Q6NUT2 758 aa13.14□□□□□ -0.31
CTDSPL2-208ENST00000559793 ZNF777Q9ULD5 760 aaPredicted RBP13.14□□□□□ -0.31
CTDSPL2-208ENST00000559793 HNRNPMP52272 730 aaKnown RBP eCLIP13.13□□□□□ -0.311e-7■■■■■ 28.3
CTDSPL2-208ENST00000559793 FBXO22Q8NEZ5 403 aa13.13□□□□□ -0.31
CTDSPL2-208ENST00000559793 MS4A4AQ96JQ5 239 aa13.13□□□□□ -0.31
CTDSPL2-208ENST00000559793 LTBP4Q8N2S1 1624 aa13.13□□□□□ -0.31
CTDSPL2-208ENST00000559793 CCDC18Q5T9S5 1454 aa13.12□□□□□ -0.31
CTDSPL2-208ENST00000559793 ZMYM3Q14202 1370 aa13.11□□□□□ -0.31
CTDSPL2-208ENST00000559793 CNTLNQ9NXG0 1405 aa13.11□□□□□ -0.31
CTDSPL2-208ENST00000559793 SAMD9LQ8IVG5 1584 aa13.11□□□□□ -0.31
CTDSPL2-208ENST00000559793 GPATCH8Q9UKJ3 1502 aaKnown RBP13.1□□□□□ -0.31
CTDSPL2-208ENST00000559793 OTUD5Q96G74 571 aa13.1□□□□□ -0.31
CTDSPL2-208ENST00000559793 L3MBTL3Q96JM7 780 aaPredicted RBP13.1□□□□□ -0.31
CTDSPL2-208ENST00000559793 NCOA1Q15788 1441 aa13.1□□□□□ -0.31
CTDSPL2-208ENST00000559793 SPAG9O60271 1321 aaKnown RBP13.1□□□□□ -0.31
CTDSPL2-208ENST00000559793 SOCS7O14512 581 aa13.09□□□□□ -0.31
CTDSPL2-208ENST00000559793 NKX1-1Q15270 411 aaPredicted RBP13.09□□□□□ -0.31
CTDSPL2-208ENST00000559793 MAMSTRQ6ZN01 415 aa13.09□□□□□ -0.31
CTDSPL2-208ENST00000559793 NCKAP5LQ9HCH0 1330 aa13.09□□□□□ -0.31
CTDSPL2-208ENST00000559793 SUPT6HQ7KZ85 1726 aaKnown RBP13.08□□□□□ -0.32
CTDSPL2-208ENST00000559793 NPATQ14207 1427 aa13.08□□□□□ -0.32
CTDSPL2-208ENST00000559793 CAMSAP1Q5T5Y3 1602 aa13.07□□□□□ -0.32
CTDSPL2-208ENST00000559793 CFDP1Q9UEE9 299 aaPredicted RBP13.07□□□□□ -0.32
CTDSPL2-208ENST00000559793 MROH2AA6NES4 1674 aa13.06□□□□□ -0.32
CTDSPL2-208ENST00000559793 FYCO1Q9BQS8 1478 aa13.06□□□□□ -0.32
CTDSPL2-208ENST00000559793 SYCP2Q9BX26 1530 aa13.06□□□□□ -0.32
CTDSPL2-208ENST00000559793 GGT6Q6P531 493 aa13.05□□□□□ -0.32
CTDSPL2-208ENST00000559793 SCUBE2Q9NQ36 999 aa13.05□□□□□ -0.32
CTDSPL2-208ENST00000559793 KIAA1107Q9UPP5 1409 aa13.05□□□□□ -0.32
CTDSPL2-208ENST00000559793 IQSEC2Q5JU85 1478 aa13.04□□□□□ -0.32
CTDSPL2-208ENST00000559793 BOLA1Q9Y3E2 137 aa13.04□□□□□ -0.32
CTDSPL2-208ENST00000559793 CLTCQ00610 1675 aaKnown RBP13.04□□□□□ -0.32
CTDSPL2-208ENST00000559793 ZNF335Q9H4Z2 1342 aaPredicted RBP13.04□□□□□ -0.32
CTDSPL2-208ENST00000559793 ZNF644Q9H582 1327 aaPredicted RBP13.03□□□□□ -0.32
CTDSPL2-208ENST00000559793 PTPRKQ15262 1439 aa13.03□□□□□ -0.32
CTDSPL2-208ENST00000559793 A2MP01023 1474 aa13.03□□□□□ -0.32
CTDSPL2-208ENST00000559793 ATP7AQ04656 1500 aa13.03□□□□□ -0.32
CTDSPL2-208ENST00000559793 CCNB3Q8WWL7 1395 aa13.02□□□□□ -0.33
CTDSPL2-208ENST00000559793 TMEM121BQ9BXQ6 578 aaPredicted RBP13.01□□□□□ -0.33
CTDSPL2-208ENST00000559793 PLEKHH2Q8IVE3 1493 aa13.01□□□□□ -0.33
CTDSPL2-208ENST00000559793 PLXNC1O60486 1568 aa13.01□□□□□ -0.33
CTDSPL2-208ENST00000559793 INO80Q9ULG1 1556 aaPredicted RBP13.01□□□□□ -0.33
CTDSPL2-208ENST00000559793 UBAP1LF5GYI3 381 aa13□□□□□ -0.33
CTDSPL2-208ENST00000559793 SPATA31D1Q6ZQQ2 1576 aa12.99□□□□□ -0.33
CTDSPL2-208ENST00000559793 G3V3G9 751 aa12.99□□□□□ -0.33
CTDSPL2-208ENST00000559793 BBXQ8WY36 941 aaPredicted RBP12.99□□□□□ -0.33
CTDSPL2-208ENST00000559793 PLA2R1Q13018 1463 aa12.98□□□□□ -0.33
CTDSPL2-208ENST00000559793 TCOF1Q13428 1488 aaKnown RBP12.98□□□□□ -0.33
CTDSPL2-208ENST00000559793 MTUS2Q5JR59 1369 aa12.98□□□□□ -0.33
CTDSPL2-208ENST00000559793 ZNF142P52746 1687 aaPredicted RBP12.98□□□□□ -0.33
CTDSPL2-208ENST00000559793 MYO3AQ8NEV4 1616 aa12.98□□□□□ -0.33
CTDSPL2-208ENST00000559793 CEP170BQ9Y4F5 1589 aaPredicted RBP12.98□□□□□ -0.33
CTDSPL2-208ENST00000559793 MICALL2Q8IY33 904 aa12.97□□□□□ -0.33
CTDSPL2-208ENST00000559793 RYDENQ9NUL5 291 aaKnown RBP12.97□□□□□ -0.33
CTDSPL2-208ENST00000559793 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.97□□□□□ -0.33
CTDSPL2-208ENST00000559793 MBD5Q9P267 1494 aa12.97□□□□□ -0.33
CTDSPL2-208ENST00000559793 ADGBQ8N7X0 1667 aa12.96□□□□□ -0.33
CTDSPL2-208ENST00000559793 PPP1R37O75864 691 aa12.96□□□□□ -0.33
CTDSPL2-208ENST00000559793 FBXO31Q5XUX0 539 aaPredicted RBP12.96□□□□□ -0.33
CTDSPL2-208ENST00000559793 GTPBP6O43824 516 aaPredicted RBP12.95□□□□□ -0.34
CTDSPL2-208ENST00000559793 C3orf67Q6ZVT6 689 aa12.95□□□□□ -0.34
CTDSPL2-208ENST00000559793 DHX29Q7Z478 1369 aaKnown RBP12.94□□□□□ -0.34
CTDSPL2-208ENST00000559793 KIF3BO15066 747 aa12.94□□□□□ -0.34
CTDSPL2-208ENST00000559793 DNMT1P26358 1616 aaKnown RBP12.94□□□□□ -0.34
CTDSPL2-208ENST00000559793 RTEL1-TNFRSF6BF6WH68 1400 aa12.94□□□□□ -0.34
CTDSPL2-208ENST00000559793 A2ML1A8K2U0 1454 aa12.93□□□□□ -0.34
CTDSPL2-208ENST00000559793 TIAM1Q13009 1591 aa12.93□□□□□ -0.34
CTDSPL2-208ENST00000559793 SLAIN1Q8ND83 568 aa12.91□□□□□ -0.34
CTDSPL2-208ENST00000559793 TNRQ92752 1358 aa12.9□□□□□ -0.34
CTDSPL2-208ENST00000559793 WASHC2CQ9Y4E1 1318 aa12.89□□□□□ -0.35
CTDSPL2-208ENST00000559793 CEP162Q5TB80 1403 aa12.89□□□□□ -0.35
CTDSPL2-208ENST00000559793 HSPA1LP34931 641 aa12.89□□□□□ -0.35
CTDSPL2-208ENST00000559793 PIP4K2BP78356 416 aa12.89□□□□□ -0.35
CTDSPL2-208ENST00000559793 RSPH4AQ5TD94 716 aa12.89□□□□□ -0.35
CTDSPL2-208ENST00000559793 ANKLE2Q86XL3 938 aa12.88□□□□□ -0.35
CTDSPL2-208ENST00000559793 THEMISQ8N1K5 641 aaPredicted RBP12.88□□□□□ -0.35
CTDSPL2-208ENST00000559793 EHBP1L1Q8N3D4 1523 aa12.88□□□□□ -0.35
CTDSPL2-208ENST00000559793 NEURL4Q96JN8 1562 aa12.87□□□□□ -0.35
CTDSPL2-208ENST00000559793 SHANK2Q9UPX8 1470 aa12.87□□□□□ -0.35
CTDSPL2-208ENST00000559793 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.87□□□□□ -0.35
CTDSPL2-208ENST00000559793 TOM1O60784 492 aa12.87□□□□□ -0.35
CTDSPL2-208ENST00000559793 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.87□□□□□ -0.35
CTDSPL2-208ENST00000559793 POLR1AO95602 1720 aaPredicted RBP12.87□□□□□ -0.35
CTDSPL2-208ENST00000559793 MIA2Q96PC5 1412 aa12.87□□□□□ -0.35
CTDSPL2-208ENST00000559793 PZPP20742 1482 aa12.86□□□□□ -0.35
CTDSPL2-208ENST00000559793 CCDC141Q6ZP82 1450 aa12.85□□□□□ -0.35
CTDSPL2-208ENST00000559793 NCOA2Q15596 1464 aa12.85□□□□□ -0.35
CTDSPL2-208ENST00000559793 CPS1P31327 1500 aa12.84□□□□□ -0.35
CTDSPL2-208ENST00000559793 KDM5DQ9BY66 1539 aa12.84□□□□□ -0.35
CTDSPL2-208ENST00000559793 TSPY4P0CV99 314 aa12.84□□□□□ -0.35
CTDSPL2-208ENST00000559793 TSPY10P0CW01 314 aa12.84□□□□□ -0.35
CTDSPL2-208ENST00000559793 CAMSAP2Q08AD1 1489 aa12.84□□□□□ -0.35
CTDSPL2-208ENST00000559793 TMEM92Q6UXU6 159 aa12.83□□□□□ -0.36
CTDSPL2-208ENST00000559793 VWDEQ8N2E2 1590 aa12.82□□□□□ -0.36
CTDSPL2-208ENST00000559793 MED14O60244 1454 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms