RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 MAPKBP1O60336 1514 aa13.77□□□□□ -0.21
CARMIL3-202ENST00000559694 A2MP01023 1474 aa13.76□□□□□ -0.21
CARMIL3-202ENST00000559694 NLRP6P59044 892 aa13.76□□□□□ -0.21
CARMIL3-202ENST00000559694 SLC12A5Q9H2X9 1139 aa13.76□□□□□ -0.21
CARMIL3-202ENST00000559694 RBM33Q96EV2 1170 aaKnown RBP13.75□□□□□ -0.21
CARMIL3-202ENST00000559694 PRKRIP1Q9H875 184 aaPredicted RBP13.75□□□□□ -0.21
CARMIL3-202ENST00000559694 GLIPR1L2Q4G1C9 344 aa13.75□□□□□ -0.21
CARMIL3-202ENST00000559694 CDK19Q9BWU1 502 aa13.74□□□□□ -0.21
CARMIL3-202ENST00000559694 ADGRF5Q8IZF2 1346 aa13.74□□□□□ -0.21
CARMIL3-202ENST00000559694 WAPLQ7Z5K2 1190 aa13.74□□□□□ -0.21
CARMIL3-202ENST00000559694 KDM5BQ9UGL1 1544 aa13.74□□□□□ -0.21
CARMIL3-202ENST00000559694 ABCC10Q5T3U5 1492 aa13.74□□□□□ -0.21
CARMIL3-202ENST00000559694 NPHP1O15259 732 aa13.73□□□□□ -0.21
CARMIL3-202ENST00000559694 CABP1Q9NZU7 370 aa13.73□□□□□ -0.21
CARMIL3-202ENST00000559694 CCDC7Q96M83 1385 aa13.73□□□□□ -0.21
CARMIL3-202ENST00000559694 DNAJC5Q9H3Z4 198 aa13.72□□□□□ -0.21
CARMIL3-202ENST00000559694 ITSN2Q9NZM3 1697 aa13.72□□□□□ -0.21
CARMIL3-202ENST00000559694 MYBBP1AQ9BQG0 1328 aaKnown RBP13.72□□□□□ -0.21
CARMIL3-202ENST00000559694 ABTB2Q8N961 1025 aa13.72□□□□□ -0.21
CARMIL3-202ENST00000559694 RRP7AQ9Y3A4 280 aaKnown RBP13.71□□□□□ -0.21
CARMIL3-202ENST00000559694 ZNF330Q9Y3S2 320 aaPredicted RBP13.71□□□□□ -0.22
CARMIL3-202ENST00000559694 WASHC2AQ641Q2 1341 aa13.7□□□□□ -0.22
CARMIL3-202ENST00000559694 TNRQ92752 1358 aa13.7□□□□□ -0.22
CARMIL3-202ENST00000559694 AMOTL2Q9Y2J4 779 aa13.7□□□□□ -0.22
CARMIL3-202ENST00000559694 CHD1O14646 1710 aa13.69□□□□□ -0.22
CARMIL3-202ENST00000559694 GPRASP1Q5JY77 1395 aa13.69□□□□□ -0.22
CARMIL3-202ENST00000559694 CALD1Q05682 793 aaKnown RBP13.68□□□□□ -0.22
CARMIL3-202ENST00000559694 DIAPH1O60610 1272 aaKnown RBP13.68□□□□□ -0.22
CARMIL3-202ENST00000559694 PIP4K2BP78356 416 aa13.68□□□□□ -0.22
CARMIL3-202ENST00000559694 HSPA2P54652 639 aa13.67□□□□□ -0.22
CARMIL3-202ENST00000559694 XPCQ01831 940 aaPredicted RBP13.67□□□□□ -0.22
CARMIL3-202ENST00000559694 MAGI3Q5TCQ9 1506 aa13.67□□□□□ -0.22
CARMIL3-202ENST00000559694 RTEL1-TNFRSF6BF6WH68 1400 aa13.67□□□□□ -0.22
CARMIL3-202ENST00000559694 MEX3CQ5U5Q3 659 aaKnown RBP13.67□□□□□ -0.22
CARMIL3-202ENST00000559694 ERCC6L2Q5T890 1561 aa13.66□□□□□ -0.22
CARMIL3-202ENST00000559694 CCDC61Q9Y6R9 512 aa13.66□□□□□ -0.22
CARMIL3-202ENST00000559694 DUOX2Q9NRD8 1548 aa13.66□□□□□ -0.22
CARMIL3-202ENST00000559694 DDRGK1Q96HY6 314 aa13.65□□□□□ -0.22
CARMIL3-202ENST00000559694 NLRP2Q9NX02 1062 aa13.65□□□□□ -0.22
CARMIL3-202ENST00000559694 ZMYM3Q14202 1370 aa13.64□□□□□ -0.23
CARMIL3-202ENST00000559694 NUDT16Q96DE0 195 aaKnown RBP13.64□□□□□ -0.23
CARMIL3-202ENST00000559694 MTHFSP49914 203 aa13.64□□□□□ -0.23
CARMIL3-202ENST00000559694 NOS1P29475 1434 aa13.64□□□□□ -0.23
CARMIL3-202ENST00000559694 GOLGA2Q08379 1002 aa13.64□□□□□ -0.23
CARMIL3-202ENST00000559694 ZNF692Q9BU19 519 aaPredicted RBP13.64□□□□□ -0.23
CARMIL3-202ENST00000559694 USP35Q9P2H5 1018 aa13.63□□□□□ -0.23
CARMIL3-202ENST00000559694 APAF1O14727 1248 aa13.63□□□□□ -0.23
CARMIL3-202ENST00000559694 DNMT1P26358 1616 aaKnown RBP13.63□□□□□ -0.23
CARMIL3-202ENST00000559694 UHRF1BP1LA0JNW5 1464 aa13.63□□□□□ -0.23
CARMIL3-202ENST00000559694 LMOD3Q0VAK6 560 aa13.63□□□□□ -0.23
CARMIL3-202ENST00000559694 HMOX1P09601 288 aa13.62□□□□□ -0.23
CARMIL3-202ENST00000559694 MS4A1P11836 297 aa13.62□□□□□ -0.23
CARMIL3-202ENST00000559694 C1orf141Q5JVX7 400 aa13.62□□□□□ -0.23
CARMIL3-202ENST00000559694 ELL2O00472 640 aaPredicted RBP13.62□□□□□ -0.23
CARMIL3-202ENST00000559694 UPF2Q9HAU5 1272 aaKnown RBP13.62□□□□□ -0.23
CARMIL3-202ENST00000559694 C14orf93Q9H972 538 aaKnown RBP13.62□□□□□ -0.23
CARMIL3-202ENST00000559694 GCC2Q8IWJ2 1684 aa13.62□□□□□ -0.23
CARMIL3-202ENST00000559694 ABCA8O94911 1581 aa13.61□□□□□ -0.23
CARMIL3-202ENST00000559694 DMRT2Q9Y5R5 561 aa13.61□□□□□ -0.23
CARMIL3-202ENST00000559694 NUTM2BA6NNL0 878 aaPredicted RBP13.61□□□□□ -0.23
CARMIL3-202ENST00000559694 NUTM2EB1AL46 878 aaPredicted RBP13.61□□□□□ -0.23
CARMIL3-202ENST00000559694 TEFQ10587 303 aa13.61□□□□□ -0.23
CARMIL3-202ENST00000559694 ERICH6BQ5W0A0 696 aa13.61□□□□□ -0.23
CARMIL3-202ENST00000559694 NUTM2AQ8IVF1 878 aaPredicted RBP13.61□□□□□ -0.23
CARMIL3-202ENST00000559694 FOXO3O43524 673 aa13.6□□□□□ -0.23
CARMIL3-202ENST00000559694 RAPGEF4Q8WZA2 1011 aa13.6□□□□□ -0.23
CARMIL3-202ENST00000559694 STK31Q9BXU1 1019 aa13.6□□□□□ -0.23
CARMIL3-202ENST00000559694 ATP10AO60312 1499 aa13.6□□□□□ -0.23
CARMIL3-202ENST00000559694 SYTL4Q96C24 671 aaPredicted RBP13.59□□□□□ -0.23
CARMIL3-202ENST00000559694 NEO1Q92859 1461 aa13.58□□□□□ -0.24
CARMIL3-202ENST00000559694 RCAN3Q9UKA8 241 aa13.58□□□□□ -0.24
CARMIL3-202ENST00000559694 IPO8O15397 1037 aaKnown RBP13.58□□□□□ -0.24
CARMIL3-202ENST00000559694 STRN4Q9NRL3 753 aa13.58□□□□□ -0.24
CARMIL3-202ENST00000559694 CHMP4BQ9H444 224 aaKnown RBP13.58□□□□□ -0.24
CARMIL3-202ENST00000559694 RPRD2Q5VT52 1461 aaKnown RBP13.57□□□□□ -0.24
CARMIL3-202ENST00000559694 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.57□□□□□ -0.24
CARMIL3-202ENST00000559694 OS9Q13438 667 aaPredicted RBP13.57□□□□□ -0.24
CARMIL3-202ENST00000559694 ATAD2Q6PL18 1390 aa13.57□□□□□ -0.24
CARMIL3-202ENST00000559694 SMC4Q9NTJ3 1288 aa13.56□□□□□ -0.24
CARMIL3-202ENST00000559694 RIPK4P57078 832 aa13.56□□□□□ -0.24
CARMIL3-202ENST00000559694 CHMP4AQ9BY43 222 aa13.56□□□□□ -0.24
CARMIL3-202ENST00000559694 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.56□□□□□ -0.24
CARMIL3-202ENST00000559694 SHANK2Q9UPX8 1470 aa13.56□□□□□ -0.24
CARMIL3-202ENST00000559694 ANP32BQ92688 251 aaKnown RBP13.56□□□□□ -0.24
CARMIL3-202ENST00000559694 YEATS2Q9ULM3 1422 aa13.56□□□□□ -0.24
CARMIL3-202ENST00000559694 FANCIQ9NVI1 1328 aa13.56□□□□□ -0.24
CARMIL3-202ENST00000559694 WASLO00401 505 aaPredicted RBP13.55□□□□□ -0.24
CARMIL3-202ENST00000559694 ZC3H6P61129 1189 aaKnown RBP13.55□□□□□ -0.24
CARMIL3-202ENST00000559694 CLUAP1Q96AJ1 413 aa13.55□□□□□ -0.24
CARMIL3-202ENST00000559694 PRDM11Q9NQV5 511 aa13.55□□□□□ -0.24
CARMIL3-202ENST00000559694 FAM135AQ9P2D6 1515 aa13.55□□□□□ -0.24
CARMIL3-202ENST00000559694 LRRIQ1Q96JM4 1722 aa13.55□□□□□ -0.24
CARMIL3-202ENST00000559694 CNTLNQ9NXG0 1405 aa13.55□□□□□ -0.24
CARMIL3-202ENST00000559694 PHF8Q9UPP1 1060 aa13.55□□□□□ -0.24
CARMIL3-202ENST00000559694 HSP90AA1P07900 732 aaKnown RBP13.54□□□□□ -0.24
CARMIL3-202ENST00000559694 PPP2R1AP30153 589 aa13.54□□□□□ -0.24
CARMIL3-202ENST00000559694 NCKAP5LQ9HCH0 1330 aa13.54□□□□□ -0.24
CARMIL3-202ENST00000559694 ATP7AQ04656 1500 aa13.54□□□□□ -0.24
CARMIL3-202ENST00000559694 C11orf95C9JLR9 678 aaPredicted RBP13.53□□□□□ -0.24
CARMIL3-202ENST00000559694 ADGRL2O95490 1459 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms