RNA–Protein interactions for RNA: ENST00000559565.5

TRIP4-206, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-206ENST00000559565 CLIP1P30622 1438 aa13.12□□□□□ -0.31
TRIP4-206ENST00000559565 DIP2CQ9Y2E4 1556 aa13.11□□□□□ -0.31
TRIP4-206ENST00000559565 PREX1Q8TCU6 1659 aa13.11□□□□□ -0.31
TRIP4-206ENST00000559565 REREQ9P2R6 1566 aa13.11□□□□□ -0.31
TRIP4-206ENST00000559565 MLH3Q9UHC1 1453 aa13.1□□□□□ -0.31
TRIP4-206ENST00000559565 POTEGQ6S5H5 508 aa13.1□□□□□ -0.31
TRIP4-206ENST00000559565 TRAPPC8Q9Y2L5 1435 aa13.1□□□□□ -0.31
TRIP4-206ENST00000559565 CASKIN1Q8WXD9 1431 aa13.09□□□□□ -0.31
TRIP4-206ENST00000559565 STRCQ7RTU9 1775 aa13.09□□□□□ -0.31
TRIP4-206ENST00000559565 ABCA6Q8N139 1617 aa13.09□□□□□ -0.31
TRIP4-206ENST00000559565 SETD1BQ9UPS6 1966 aaKnown RBP13.09□□□□□ -0.31
TRIP4-206ENST00000559565 LCE2DQ5TA82 110 aaPredicted RBP13.08□□□□□ -0.32
TRIP4-206ENST00000559565 PREX2Q70Z35 1606 aa13.08□□□□□ -0.32
TRIP4-206ENST00000559565 ABCC1P33527 1531 aa13.08□□□□□ -0.32
TRIP4-206ENST00000559565 MYT1LQ9UL68 1186 aa13.07□□□□□ -0.32
TRIP4-206ENST00000559565 AGLP35573 1532 aa13.07□□□□□ -0.32
TRIP4-206ENST00000559565 CCDC18Q5T9S5 1454 aa13.06□□□□□ -0.32
TRIP4-206ENST00000559565 ST18O60284 1047 aa13.06□□□□□ -0.32
TRIP4-206ENST00000559565 ITSN2Q9NZM3 1697 aa13.05□□□□□ -0.32
TRIP4-206ENST00000559565 UHRF1BP1Q6BDS2 1440 aa13.05□□□□□ -0.32
TRIP4-206ENST00000559565 C3P01024 1663 aa13.05□□□□□ -0.32
TRIP4-206ENST00000559565 KIDINS220Q9ULH0 1771 aa13.04□□□□□ -0.32
TRIP4-206ENST00000559565 CDC42BPAQ5VT25 1732 aa13.04□□□□□ -0.32
TRIP4-206ENST00000559565 FYCO1Q9BQS8 1478 aa13.01□□□□□ -0.33
TRIP4-206ENST00000559565 SAMD9LQ8IVG5 1584 aa13□□□□□ -0.33
TRIP4-206ENST00000559565 GPATCH8Q9UKJ3 1502 aaKnown RBP13□□□□□ -0.33
TRIP4-206ENST00000559565 PTPRTO14522 1441 aa13□□□□□ -0.33
TRIP4-206ENST00000559565 TMEM92Q6UXU6 159 aa13□□□□□ -0.33
TRIP4-206ENST00000559565 HNRNPMP52272 730 aaKnown RBP eCLIP12.99□□□□□ -0.33
TRIP4-206ENST00000559565 CNTLNQ9NXG0 1405 aa12.98□□□□□ -0.33
TRIP4-206ENST00000559565 PPP1R37O75864 691 aa12.98□□□□□ -0.33
TRIP4-206ENST00000559565 ESF1Q9H501 851 aaKnown RBP12.98□□□□□ -0.33
TRIP4-206ENST00000559565 ZNF777Q9ULD5 760 aaPredicted RBP12.98□□□□□ -0.33
TRIP4-206ENST00000559565 SYCP2Q9BX26 1530 aa12.98□□□□□ -0.33
TRIP4-206ENST00000559565 NCOA1Q15788 1441 aa12.96□□□□□ -0.33
TRIP4-206ENST00000559565 LTBP4Q8N2S1 1624 aa12.96□□□□□ -0.33
TRIP4-206ENST00000559565 SPAG9O60271 1321 aaKnown RBP12.96□□□□□ -0.33
TRIP4-206ENST00000559565 NKX1-1Q15270 411 aaPredicted RBP12.96□□□□□ -0.33
TRIP4-206ENST00000559565 ZNF710Q8N1W2 664 aa12.96□□□□□ -0.33
TRIP4-206ENST00000559565 KIAA1107Q9UPP5 1409 aa12.96□□□□□ -0.34
TRIP4-206ENST00000559565 ZMYM3Q14202 1370 aa12.95□□□□□ -0.34
TRIP4-206ENST00000559565 RYDENQ9NUL5 291 aaKnown RBP12.95□□□□□ -0.34
TRIP4-206ENST00000559565 NPATQ14207 1427 aa12.95□□□□□ -0.34
TRIP4-206ENST00000559565 MROH2AA6NES4 1674 aa12.94□□□□□ -0.34
TRIP4-206ENST00000559565 DOK7Q18PE1 504 aa12.94□□□□□ -0.34
TRIP4-206ENST00000559565 SUPT6HQ7KZ85 1726 aaKnown RBP12.93□□□□□ -0.34
TRIP4-206ENST00000559565 ATP7AQ04656 1500 aa12.93□□□□□ -0.34
TRIP4-206ENST00000559565 MARVELD3Q96A59 401 aa12.93□□□□□ -0.34
TRIP4-206ENST00000559565 CFDP1Q9UEE9 299 aaPredicted RBP12.93□□□□□ -0.34
TRIP4-206ENST00000559565 PLXNC1O60486 1568 aa12.93□□□□□ -0.34
TRIP4-206ENST00000559565 INO80Q9ULG1 1556 aaPredicted RBP12.93□□□□□ -0.34
TRIP4-206ENST00000559565 RIMBP2O15034 1052 aa12.92□□□□□ -0.34
TRIP4-206ENST00000559565 CCNB3Q8WWL7 1395 aa12.92□□□□□ -0.34
TRIP4-206ENST00000559565 CAMSAP1Q5T5Y3 1602 aa12.91□□□□□ -0.34
TRIP4-206ENST00000559565 A2MP01023 1474 aa12.91□□□□□ -0.34
TRIP4-206ENST00000559565 PLEKHH2Q8IVE3 1493 aa12.91□□□□□ -0.34
TRIP4-206ENST00000559565 HOXB3P14651 431 aaPredicted RBP12.91□□□□□ -0.34
TRIP4-206ENST00000559565 ILDR2Q71H61 639 aa12.91□□□□□ -0.34
TRIP4-206ENST00000559565 ZNF644Q9H582 1327 aaPredicted RBP12.9□□□□□ -0.34
TRIP4-206ENST00000559565 TMC2Q8TDI7 906 aa12.9□□□□□ -0.34
TRIP4-206ENST00000559565 CLTCQ00610 1675 aaKnown RBP12.89□□□□□ -0.35
TRIP4-206ENST00000559565 NCKAP5LQ9HCH0 1330 aa12.89□□□□□ -0.35
TRIP4-206ENST00000559565 PTPRKQ15262 1439 aa12.89□□□□□ -0.35
TRIP4-206ENST00000559565 EMP3P54852 163 aa12.89□□□□□ -0.35
TRIP4-206ENST00000559565 IQSEC2Q5JU85 1478 aa12.89□□□□□ -0.35
TRIP4-206ENST00000559565 MBD5Q9P267 1494 aa12.89□□□□□ -0.35
TRIP4-206ENST00000559565 C2orf72A6NCS6 295 aa12.88□□□□□ -0.35
TRIP4-206ENST00000559565 GGT6Q6P531 493 aa12.88□□□□□ -0.35
TRIP4-206ENST00000559565 MTUS2Q5JR59 1369 aa12.88□□□□□ -0.35
TRIP4-206ENST00000559565 DISP3Q9P2K9 1392 aa12.88□□□□□ -0.35
TRIP4-206ENST00000559565 TIAM1Q13009 1591 aa12.87□□□□□ -0.35
TRIP4-206ENST00000559565 ZNF142P52746 1687 aaPredicted RBP12.86□□□□□ -0.35
TRIP4-206ENST00000559565 PLA2R1Q13018 1463 aa12.86□□□□□ -0.35
TRIP4-206ENST00000559565 MYO3AQ8NEV4 1616 aa12.86□□□□□ -0.35
TRIP4-206ENST00000559565 ZNF335Q9H4Z2 1342 aaPredicted RBP12.86□□□□□ -0.35
TRIP4-206ENST00000559565 TCOF1Q13428 1488 aaKnown RBP12.85□□□□□ -0.35
TRIP4-206ENST00000559565 PCDH10Q9P2E7 1040 aa12.85□□□□□ -0.35
TRIP4-206ENST00000559565 ADGBQ8N7X0 1667 aa12.85□□□□□ -0.35
TRIP4-206ENST00000559565 CEP170BQ9Y4F5 1589 aaPredicted RBP12.85□□□□□ -0.35
TRIP4-206ENST00000559565 RTEL1-TNFRSF6BF6WH68 1400 aa12.84□□□□□ -0.35
TRIP4-206ENST00000559565 CEP162Q5TB80 1403 aa12.84□□□□□ -0.35
TRIP4-206ENST00000559565 EHBP1L1Q8N3D4 1523 aa12.83□□□□□ -0.35
TRIP4-206ENST00000559565 DHX29Q7Z478 1369 aaKnown RBP12.83□□□□□ -0.36
TRIP4-206ENST00000559565 CDAN1Q8IWY9 1227 aa12.83□□□□□ -0.36
TRIP4-206ENST00000559565 KIF3CO14782 793 aa12.82□□□□□ -0.36
TRIP4-206ENST00000559565 FAM205CA6NFA0 338 aa12.81□□□□□ -0.36
TRIP4-206ENST00000559565 SOCS7O14512 581 aa12.81□□□□□ -0.36
TRIP4-206ENST00000559565 HOXB1P14653 301 aaPredicted RBP12.81□□□□□ -0.36
TRIP4-206ENST00000559565 DNMT1P26358 1616 aaKnown RBP12.8□□□□□ -0.36
TRIP4-206ENST00000559565 A2ML1A8K2U0 1454 aa12.8□□□□□ -0.36
TRIP4-206ENST00000559565 GTPBP6O43824 516 aaPredicted RBP12.8□□□□□ -0.36
TRIP4-206ENST00000559565 FBXO31Q5XUX0 539 aaPredicted RBP12.8□□□□□ -0.36
TRIP4-206ENST00000559565 PLSCR2Q9NRY7 297 aa12.8□□□□□ -0.36
TRIP4-206ENST00000559565 SPATA31D1Q6ZQQ2 1576 aa12.8□□□□□ -0.36
TRIP4-206ENST00000559565 KIF3BO15066 747 aa12.79□□□□□ -0.36
TRIP4-206ENST00000559565 UBAP1LF5GYI3 381 aa12.78□□□□□ -0.36
TRIP4-206ENST00000559565 ZSWIM6Q9HCJ5 1215 aa12.78□□□□□ -0.36
TRIP4-206ENST00000559565 NCOA2Q15596 1464 aa12.78□□□□□ -0.36
TRIP4-206ENST00000559565 CCDC141Q6ZP82 1450 aa12.78□□□□□ -0.36
TRIP4-206ENST00000559565 CAMSAP2Q08AD1 1489 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms