RNA–Protein interactions for RNA: ENST00000559545.5

CDK12-204, Transcript of cyclin dependent kinase 12, humanhuman

TSL 5

Gene CDK12, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-204ENST00000559545 ZBTB7CA1YPR0 619 aa8.22□□□□□ -1.09
CDK12-204ENST00000559545 PPARGC1BQ86YN6 1023 aaKnown RBP8.22□□□□□ -1.09
CDK12-204ENST00000559545 SPOCK2Q92563 424 aa8.22□□□□□ -1.09
CDK12-204ENST00000559545 STRCQ7RTU9 1775 aa8.22□□□□□ -1.09
CDK12-204ENST00000559545 PTPRTO14522 1441 aa8.21□□□□□ -1.09
CDK12-204ENST00000559545 NLRP1Q9C000 1473 aa8.21□□□□□ -1.09
CDK12-204ENST00000559545 CHGAP10645 457 aaKnown RBP8.21□□□□□ -1.1
CDK12-204ENST00000559545 CEBPAP49715 358 aaPredicted RBP8.21□□□□□ -1.1
CDK12-204ENST00000559545 MLECQ14165 292 aa8.21□□□□□ -1.1
CDK12-204ENST00000559545 KANK1Q14678 1352 aa8.21□□□□□ -1.1
CDK12-204ENST00000559545 ESF1Q9H501 851 aaKnown RBP8.2□□□□□ -1.1
CDK12-204ENST00000559545 SLC52A1Q9NWF4 448 aa8.2□□□□□ -1.1
CDK12-204ENST00000559545 PIK3C2BO00750 1634 aa8.2□□□□□ -1.1
CDK12-204ENST00000559545 E9PCH4 1651 aa8.2□□□□□ -1.1
CDK12-204ENST00000559545 A2ML1A8K2U0 1454 aa8.19□□□□□ -1.1
CDK12-204ENST00000559545 ERVK-7P63135 1459 aa8.19□□□□□ -1.1
CDK12-204ENST00000559545 PLA2R1Q13018 1463 aa8.19□□□□□ -1.1
CDK12-204ENST00000559545 EFCAB6Q5THR3 1501 aa8.19□□□□□ -1.1
CDK12-204ENST00000559545 FBXO31Q5XUX0 539 aaPredicted RBP8.19□□□□□ -1.1
CDK12-204ENST00000559545 PROM2Q8N271 834 aa8.19□□□□□ -1.1
CDK12-204ENST00000559545 RGL2O15211 777 aa8.18□□□□□ -1.1
CDK12-204ENST00000559545 EIF5BO60841 1220 aaKnown RBP8.18□□□□□ -1.1
CDK12-204ENST00000559545 BRPF1P55201 1214 aaPredicted RBP8.18□□□□□ -1.1
CDK12-204ENST00000559545 SETD5Q9C0A6 1442 aa8.18□□□□□ -1.1
CDK12-204ENST00000559545 MED14O60244 1454 aa8.18□□□□□ -1.1
CDK12-204ENST00000559545 NEURL4Q96JN8 1562 aa8.18□□□□□ -1.1
CDK12-204ENST00000559545 TNRQ92752 1358 aa8.17□□□□□ -1.1
CDK12-204ENST00000559545 UHRF1BP1Q6BDS2 1440 aa8.17□□□□□ -1.1
CDK12-204ENST00000559545 ARHGAP23Q9P227 1491 aa8.17□□□□□ -1.1
CDK12-204ENST00000559545 MYO3AQ8NEV4 1616 aa8.17□□□□□ -1.1
CDK12-204ENST00000559545 UBR1Q8IWV7 1749 aa8.17□□□□□ -1.1
CDK12-204ENST00000559545 SYNMO15061 1565 aa8.16□□□□□ -1.1
CDK12-204ENST00000559545 SLIT1O75093 1534 aa8.16□□□□□ -1.1
CDK12-204ENST00000559545 NUP155O75694 1391 aa8.16□□□□□ -1.1
CDK12-204ENST00000559545 IDI1Q13907 227 aa8.16□□□□□ -1.1
CDK12-204ENST00000559545 THEMISQ8N1K5 641 aaPredicted RBP8.16□□□□□ -1.1
CDK12-204ENST00000559545 ZMYND15Q9H091 742 aa8.16□□□□□ -1.1
CDK12-204ENST00000559545 RSPH6AQ9H0K4 717 aa8.16□□□□□ -1.1
CDK12-204ENST00000559545 CEP170BQ9Y4F5 1589 aaPredicted RBP8.16□□□□□ -1.1
CDK12-204ENST00000559545 ATF5Q9Y2D1 282 aaPredicted RBP8.15□□□□□ -1.1
CDK12-204ENST00000559545 SPHKAPQ2M3C7 1700 aa8.14□□□□□ -1.11
CDK12-204ENST00000559545 TMEM131LA2VDJ0 1609 aa8.14□□□□□ -1.11
CDK12-204ENST00000559545 MYO5BQ9ULV0 1848 aa8.13□□□□□ -1.11
CDK12-204ENST00000559545 MPHOSPH9Q99550 1183 aa8.13□□□□□ -1.11
CDK12-204ENST00000559545 UGGT1Q9NYU2 1555 aa8.13□□□□□ -1.11
CDK12-204ENST00000559545 NEUROD2Q15784 382 aa8.12□□□□□ -1.11
CDK12-204ENST00000559545 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.12□□□□□ -1.11
CDK12-204ENST00000559545 KIF1BO60333 1816 aa8.12□□□□□ -1.11
CDK12-204ENST00000559545 POLR1AO95602 1720 aaPredicted RBP8.12□□□□□ -1.11
CDK12-204ENST00000559545 HMGB1P09429 215 aaKnown RBP8.11□□□□□ -1.11
CDK12-204ENST00000559545 PDIA4P13667 645 aaKnown RBP8.11□□□□□ -1.11
CDK12-204ENST00000559545 ITGAEP38570 1179 aa8.11□□□□□ -1.11
CDK12-204ENST00000559545 TRPM2O94759 1503 aa8.11□□□□□ -1.11
CDK12-204ENST00000559545 ZFYVE9O95405 1425 aa8.11□□□□□ -1.11
CDK12-204ENST00000559545 RAB3GAP2Q9H2M9 1393 aa8.1□□□□□ -1.11
CDK12-204ENST00000559545 DCAF8L1A6NGE4 600 aa8.1□□□□□ -1.11
CDK12-204ENST00000559545 STAC3Q96MF2 364 aa8.1□□□□□ -1.11
CDK12-204ENST00000559545 ARID3AQ99856 593 aa8.1□□□□□ -1.11
CDK12-204ENST00000559545 TMEM2Q9UHN6 1383 aa8.1□□□□□ -1.11
CDK12-204ENST00000559545 RPGRIP1LQ68CZ1 1315 aa8.09□□□□□ -1.11
CDK12-204ENST00000559545 ANKLE2Q86XL3 938 aa8.09□□□□□ -1.11
CDK12-204ENST00000559545 ANKRD30BQ9BXX2 1392 aa8.09□□□□□ -1.12
CDK12-204ENST00000559545 LTKP29376 864 aa8.08□□□□□ -1.12
CDK12-204ENST00000559545 HDGFP51858 240 aaKnown RBP8.08□□□□□ -1.12
CDK12-204ENST00000559545 HSPA2P54652 639 aa8.08□□□□□ -1.12
CDK12-204ENST00000559545 ADGRB3O60242 1522 aa8.08□□□□□ -1.12
CDK12-204ENST00000559545 LMOD2Q6P5Q4 547 aa8.07□□□□□ -1.12
CDK12-204ENST00000559545 CHD2O14647 1828 aaKnown RBP8.07□□□□□ -1.12
CDK12-204ENST00000559545 CLTCL1P53675 1640 aa8.07□□□□□ -1.12
CDK12-204ENST00000559545 LTBP4Q8N2S1 1624 aa8.07□□□□□ -1.12
CDK12-204ENST00000559545 IQSEC2Q5JU85 1478 aa8.06□□□□□ -1.12
CDK12-204ENST00000559545 SPATA31E1Q6ZUB1 1445 aa8.06□□□□□ -1.12
CDK12-204ENST00000559545 SAMD1Q6SPF0 538 aaPredicted RBP8.06□□□□□ -1.12
CDK12-204ENST00000559545 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.06□□□□□ -1.12
CDK12-204ENST00000559545 TBX22Q9Y458 520 aa8.06□□□□□ -1.12
CDK12-204ENST00000559545 IFT172Q9UG01 1749 aa8.06□□□□□ -1.12
CDK12-204ENST00000559545 IQGAP1P46940 1657 aa8.05□□□□□ -1.12
CDK12-204ENST00000559545 PPLO60437 1756 aa8.05□□□□□ -1.12
CDK12-204ENST00000559545 PIK3R4Q99570 1358 aa8.05□□□□□ -1.12
CDK12-204ENST00000559545 PLEKHG1Q9ULL1 1385 aa8.05□□□□□ -1.12
CDK12-204ENST00000559545 SCAF11Q99590 1463 aaKnown RBP8.05□□□□□ -1.12
CDK12-204ENST00000559545 TXNDC2Q86VQ3 553 aa8.04□□□□□ -1.12
CDK12-204ENST00000559545 TRIM52Q96A61 297 aa8.04□□□□□ -1.12
CDK12-204ENST00000559545 NCKAP5LQ9HCH0 1330 aa8.03□□□□□ -1.12
CDK12-204ENST00000559545 NPHP4O75161 1426 aaPredicted RBP8.03□□□□□ -1.12
CDK12-204ENST00000559545 PRAG1Q86YV5 1406 aa8.03□□□□□ -1.12
CDK12-204ENST00000559545 NEXMIFQ5QGS0 1516 aa8.03□□□□□ -1.12
CDK12-204ENST00000559545 STRCP1A6NGW2 1772 aa8.03□□□□□ -1.12
CDK12-204ENST00000559545 SETBP1Q9Y6X0 1596 aa8.03□□□□□ -1.12
CDK12-204ENST00000559545 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.03□□□□□ -1.12
CDK12-204ENST00000559545 EID1Q9Y6B2 187 aa8.03□□□□□ -1.12
CDK12-204ENST00000559545 NCOA3Q9Y6Q9 1424 aa8.03□□□□□ -1.12
CDK12-204ENST00000559545 NRXN1Q9ULB1 1477 aa8.02□□□□□ -1.13
CDK12-204ENST00000559545 SETD1AO15047 1707 aaKnown RBP8.02□□□□□ -1.13
CDK12-204ENST00000559545 NRXN3Q9Y4C0 1643 aa8.02□□□□□ -1.13
CDK12-204ENST00000559545 ADAMTS13Q76LX8 1427 aa8.02□□□□□ -1.13
CDK12-204ENST00000559545 RIMS2Q9UQ26 1411 aa8.02□□□□□ -1.13
CDK12-204ENST00000559545 DIP2AQ14689 1571 aa8.01□□□□□ -1.13
CDK12-204ENST00000559545 XIRP1Q702N8 1843 aaKnown RBP8.01□□□□□ -1.13
CDK12-204ENST00000559545 VGFO15240 615 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms