RNA–Protein interactions for RNA: ENST00000559499.1

PCSK6-210, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

TSL 2

Gene PCSK6, Length 3,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-210ENST00000559499 PPRC1Q5VV67 1664 aaKnown RBP20.75■□□□□ 0.91
PCSK6-210ENST00000559499 MLH3Q9UHC1 1453 aa20.75■□□□□ 0.91
PCSK6-210ENST00000559499 HECW2Q9P2P5 1572 aa20.75■□□□□ 0.91
PCSK6-210ENST00000559499 COL17A1Q9UMD9 1497 aaPredicted RBP20.74■□□□□ 0.91
PCSK6-210ENST00000559499 SLC12A5Q9H2X9 1139 aa20.74■□□□□ 0.91
PCSK6-210ENST00000559499 FRMPD1Q5SYB0 1578 aa20.74■□□□□ 0.91
PCSK6-210ENST00000559499 ABCA6Q8N139 1617 aa20.74■□□□□ 0.91
PCSK6-210ENST00000559499 B4GALNT3Q6L9W6 998 aa20.73■□□□□ 0.91
PCSK6-210ENST00000559499 SCAF11Q99590 1463 aaKnown RBP20.73■□□□□ 0.91
PCSK6-210ENST00000559499 EFCAB6Q5THR3 1501 aa20.72■□□□□ 0.91
PCSK6-210ENST00000559499 CDCA8Q53HL2 280 aa20.72■□□□□ 0.91
PCSK6-210ENST00000559499 CENPJQ9HC77 1338 aaPredicted RBP20.72■□□□□ 0.91
PCSK6-210ENST00000559499 TRHP20396 242 aaPredicted RBP20.71■□□□□ 0.91
PCSK6-210ENST00000559499 CCDC146Q8IYE0 955 aa20.71■□□□□ 0.91
PCSK6-210ENST00000559499 NEO1Q92859 1461 aa20.71■□□□□ 0.91
PCSK6-210ENST00000559499 EIF3AQ14152 1382 aaKnown RBP20.71■□□□□ 0.91
PCSK6-210ENST00000559499 CDCA7LQ96GN5 454 aa20.7■□□□□ 0.9
PCSK6-210ENST00000559499 DEPDC5O75140 1603 aa20.7■□□□□ 0.9
PCSK6-210ENST00000559499 CABP2Q9NPB3 220 aa20.7■□□□□ 0.9
PCSK6-210ENST00000559499 MADDQ8WXG6 1647 aa20.69■□□□□ 0.9
PCSK6-210ENST00000559499 POLR1AO95602 1720 aaPredicted RBP20.69■□□□□ 0.9
PCSK6-210ENST00000559499 EIF2AK4Q9P2K8 1649 aaKnown RBP20.68■□□□□ 0.9
PCSK6-210ENST00000559499 MINK1Q8N4C8 1332 aaPredicted RBP20.68■□□□□ 0.9
PCSK6-210ENST00000559499 VGFO15240 615 aaPredicted RBP20.68■□□□□ 0.9
PCSK6-210ENST00000559499 WDR43Q15061 677 aaKnown RBP eCLIP20.68■□□□□ 0.9
PCSK6-210ENST00000559499 ADAMTS8Q9UP79 889 aa20.68■□□□□ 0.9
PCSK6-210ENST00000559499 RNF17Q9BXT8 1623 aaKnown RBP20.68■□□□□ 0.9
PCSK6-210ENST00000559499 SRPK2P78362 688 aaKnown RBP20.66■□□□□ 0.9
PCSK6-210ENST00000559499 BRD4O60885 1362 aaPredicted RBP20.66■□□□□ 0.9
PCSK6-210ENST00000559499 VWDEQ8N2E2 1590 aa20.66■□□□□ 0.9
PCSK6-210ENST00000559499 PPP2R1AP30153 589 aa20.66■□□□□ 0.9
PCSK6-210ENST00000559499 POGKQ9P215 609 aa20.66■□□□□ 0.9
PCSK6-210ENST00000559499 ABCC3O15438 1527 aa20.66■□□□□ 0.9
PCSK6-210ENST00000559499 C14orf93Q9H972 538 aaKnown RBP20.65■□□□□ 0.9
PCSK6-210ENST00000559499 CARD14Q9BXL6 1004 aa20.65■□□□□ 0.9
PCSK6-210ENST00000559499 PARD3Q8TEW0 1356 aa20.64■□□□□ 0.9
PCSK6-210ENST00000559499 AMER1Q5JTC6 1135 aaPredicted RBP20.64■□□□□ 0.89
PCSK6-210ENST00000559499 NUDCQ9Y266 331 aa20.64■□□□□ 0.89
PCSK6-210ENST00000559499 STAC3Q96MF2 364 aa20.63■□□□□ 0.89
PCSK6-210ENST00000559499 CFAP74Q9C0B2 1584 aa20.63■□□□□ 0.89
PCSK6-210ENST00000559499 DIP2CQ9Y2E4 1556 aa20.63■□□□□ 0.89
PCSK6-210ENST00000559499 NEUROD2Q15784 382 aa20.63■□□□□ 0.89
PCSK6-210ENST00000559499 TSHZ2Q9NRE2 1034 aa20.63■□□□□ 0.89
PCSK6-210ENST00000559499 MROH2AA6NES4 1674 aa20.62■□□□□ 0.89
PCSK6-210ENST00000559499 KIF1BO60333 1816 aa20.61■□□□□ 0.89
PCSK6-210ENST00000559499 CEBPAP49715 358 aaPredicted RBP20.6■□□□□ 0.89
PCSK6-210ENST00000559499 BCL11AQ9H165 835 aa20.6■□□□□ 0.89
PCSK6-210ENST00000559499 PRAM1Q96QH2 718 aa20.6■□□□□ 0.89
PCSK6-210ENST00000559499 SLC52A1Q9NWF4 448 aa20.59■□□□□ 0.89
PCSK6-210ENST00000559499 MORC1Q86VD1 984 aa20.58■□□□□ 0.88
PCSK6-210ENST00000559499 PLIN1O60240 522 aa20.57■□□□□ 0.88
PCSK6-210ENST00000559499 WAPLQ7Z5K2 1190 aa20.57■□□□□ 0.88
PCSK6-210ENST00000559499 MAP3K4Q9Y6R4 1608 aa20.56■□□□□ 0.88
PCSK6-210ENST00000559499 NUTM2FA1L443 756 aa20.56■□□□□ 0.88
PCSK6-210ENST00000559499 ERVK-7P63135 1459 aa20.53■□□□□ 0.88
PCSK6-210ENST00000559499 DIP2BQ9P265 1576 aa20.53■□□□□ 0.88
PCSK6-210ENST00000559499 RRP7AQ9Y3A4 280 aaKnown RBP20.53■□□□□ 0.88
PCSK6-210ENST00000559499 RICTORQ6R327 1708 aa20.52■□□□□ 0.88
PCSK6-210ENST00000559499 RPGRIP1LQ68CZ1 1315 aa20.52■□□□□ 0.88
PCSK6-210ENST00000559499 SIGLEC1Q9BZZ2 1709 aa20.51■□□□□ 0.87
PCSK6-210ENST00000559499 PIK3C2GO75747 1445 aa20.51■□□□□ 0.87
PCSK6-210ENST00000559499 LMTK2Q8IWU2 1503 aa20.51■□□□□ 0.87
PCSK6-210ENST00000559499 APAF1O14727 1248 aa20.51■□□□□ 0.87
PCSK6-210ENST00000559499 LRPPRCP42704 1394 aaKnown RBP20.51■□□□□ 0.87
PCSK6-210ENST00000559499 PPM1GO15355 546 aaPredicted RBP20.51■□□□□ 0.87
PCSK6-210ENST00000559499 GGNBP2Q9H3C7 697 aa20.51■□□□□ 0.87
PCSK6-210ENST00000559499 ADGRB3O60242 1522 aa20.51■□□□□ 0.87
PCSK6-210ENST00000559499 PPP4R2Q9NY27 417 aa20.5■□□□□ 0.87
PCSK6-210ENST00000559499 NSD3Q9BZ95 1437 aa20.5■□□□□ 0.87
PCSK6-210ENST00000559499 CAMSAP1Q5T5Y3 1602 aa20.5■□□□□ 0.87
PCSK6-210ENST00000559499 EVC2Q86UK5 1308 aa20.5■□□□□ 0.87
PCSK6-210ENST00000559499 PRKCSHP14314 528 aaPredicted RBP20.5■□□□□ 0.87
PCSK6-210ENST00000559499 MYOM2P54296 1465 aa20.5■□□□□ 0.87
PCSK6-210ENST00000559499 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.49■□□□□ 0.87
PCSK6-210ENST00000559499 FBLN1P23142 703 aa20.49■□□□□ 0.87
PCSK6-210ENST00000559499 CCDC136Q96JN2 1154 aa20.49■□□□□ 0.87
PCSK6-210ENST00000559499 RCAN3Q9UKA8 241 aa20.49■□□□□ 0.87
PCSK6-210ENST00000559499 SYNMO15061 1565 aa20.49■□□□□ 0.87
PCSK6-210ENST00000559499 IQGAP1P46940 1657 aa20.48■□□□□ 0.87
PCSK6-210ENST00000559499 TXNDC2Q86VQ3 553 aa20.48■□□□□ 0.87
PCSK6-210ENST00000559499 SMG6Q86US8 1419 aaKnown RBP20.46■□□□□ 0.87
PCSK6-210ENST00000559499 LAMC1P11047 1609 aa20.46■□□□□ 0.87
PCSK6-210ENST00000559499 MTHFSP49914 203 aa20.45■□□□□ 0.86
PCSK6-210ENST00000559499 NCKAP5LQ9HCH0 1330 aa20.43■□□□□ 0.86
PCSK6-210ENST00000559499 EXOC6Q8TAG9 804 aa20.43■□□□□ 0.86
PCSK6-210ENST00000559499 CABP1Q9NZU7 370 aa20.43■□□□□ 0.86
PCSK6-210ENST00000559499 ASXL1Q8IXJ9 1541 aa20.43■□□□□ 0.86
PCSK6-210ENST00000559499 U2SURPO15042 1029 aaKnown RBP20.42■□□□□ 0.86
PCSK6-210ENST00000559499 CDK19Q9BWU1 502 aa20.42■□□□□ 0.86
PCSK6-210ENST00000559499 SLC26A8Q96RN1 970 aa20.41■□□□□ 0.86
PCSK6-210ENST00000559499 SLC24A1O60721 1099 aa20.41■□□□□ 0.86
PCSK6-210ENST00000559499 ZMYM3Q14202 1370 aa20.41■□□□□ 0.86
PCSK6-210ENST00000559499 CGNL1Q0VF96 1302 aa20.39■□□□□ 0.86
PCSK6-210ENST00000559499 GLI2P10070 1586 aa20.39■□□□□ 0.85
PCSK6-210ENST00000559499 SOX12O15370 315 aa20.38■□□□□ 0.85
PCSK6-210ENST00000559499 RRP1P56182 461 aaKnown RBP20.38■□□□□ 0.85
PCSK6-210ENST00000559499 PLEKHH1Q9ULM0 1364 aa20.38■□□□□ 0.85
PCSK6-210ENST00000559499 U2AF1L5P0DN76 240 aaPredicted RBP20.38■□□□□ 0.85
PCSK6-210ENST00000559499 U2AF1Q01081 240 aaKnown RBP eCLIP20.38■□□□□ 0.85
PCSK6-210ENST00000559499 KDM5AP29375 1690 aaKnown RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms