RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 FAM161AQ3B820 660 aa7.46□□□□□ -1.22
LRRC28-212ENST00000558911 PKDCCQ504Y2 493 aa7.46□□□□□ -1.22
LRRC28-212ENST00000558911 PRR14Q9BWN1 585 aa7.46□□□□□ -1.22
LRRC28-212ENST00000558911 ZNF775Q96BV0 537 aaPredicted RBP7.45□□□□□ -1.22
LRRC28-212ENST00000558911 S1PR4O95977 384 aa7.44□□□□□ -1.22
LRRC28-212ENST00000558911 NUTM2FA1L443 756 aa7.43□□□□□ -1.22
LRRC28-212ENST00000558911 DNAJB2P25686 324 aa7.43□□□□□ -1.22
LRRC28-212ENST00000558911 KMT5BQ4FZB7 885 aa7.43□□□□□ -1.22
LRRC28-212ENST00000558911 TRIM67Q6ZTA4 783 aa7.43□□□□□ -1.22
LRRC28-212ENST00000558911 RBM46Q8TBY0 533 aaKnown RBP7.43□□□□□ -1.22
LRRC28-212ENST00000558911 TNFRSF10AO00220 468 aa7.42□□□□□ -1.22
LRRC28-212ENST00000558911 CFHP08603 1231 aa7.42□□□□□ -1.22
LRRC28-212ENST00000558911 SPRYD7Q5W111 196 aa7.42□□□□□ -1.22
LRRC28-212ENST00000558911 EMID1Q96A84 441 aaPredicted RBP7.42□□□□□ -1.22
LRRC28-212ENST00000558911 ZNF697Q5TEC3 545 aa7.41□□□□□ -1.22
LRRC28-212ENST00000558911 RCCD1A6NED2 376 aa7.4□□□□□ -1.22
LRRC28-212ENST00000558911 FAM187AA6NFU0 413 aa7.4□□□□□ -1.22
LRRC28-212ENST00000558911 PTGDRQ13258 359 aa7.4□□□□□ -1.22
LRRC28-212ENST00000558911 LIAT1Q6ZQX7 453 aa7.4□□□□□ -1.22
LRRC28-212ENST00000558911 ZNF598Q86UK7 904 aaKnown RBP7.4□□□□□ -1.22
LRRC28-212ENST00000558911 TMEM134Q9H6X4 195 aa7.4□□□□□ -1.22
LRRC28-212ENST00000558911 POTECB2RU33 542 aa7.39□□□□□ -1.23
LRRC28-212ENST00000558911 MYT1Q01538 1121 aa7.39□□□□□ -1.23
LRRC28-212ENST00000558911 ADGRG1Q9Y653 693 aa7.39□□□□□ -1.23
LRRC28-212ENST00000558911 ACTN4O43707 911 aaKnown RBP7.38□□□□□ -1.23
LRRC28-212ENST00000558911 ANKLE1Q8NAG6 615 aa7.38□□□□□ -1.23
LRRC28-212ENST00000558911 KCNV2Q8TDN2 545 aa7.38□□□□□ -1.23
LRRC28-212ENST00000558911 RTN4Q9NQC3 1192 aaKnown RBP7.38□□□□□ -1.23
LRRC28-212ENST00000558911 DGAT1O75907 488 aa7.37□□□□□ -1.23
LRRC28-212ENST00000558911 FOXC1Q12948 553 aa7.37□□□□□ -1.23
LRRC28-212ENST00000558911 PUS10Q3MIT2 529 aaKnown RBP7.37□□□□□ -1.23
LRRC28-212ENST00000558911 AMER1Q5JTC6 1135 aaPredicted RBP7.37□□□□□ -1.23
LRRC28-212ENST00000558911 ARHGEF1Q92888 912 aaKnown RBP7.37□□□□□ -1.23
LRRC28-212ENST00000558911 SLC6A16Q9GZN6 736 aa7.37□□□□□ -1.23
LRRC28-212ENST00000558911 TSHZ2Q9NRE2 1034 aa7.37□□□□□ -1.23
LRRC28-212ENST00000558911 NR1I2O75469 434 aa7.36□□□□□ -1.23
LRRC28-212ENST00000558911 ADH1BP00325 375 aa7.36□□□□□ -1.23
LRRC28-212ENST00000558911 SLC10A3P09131 477 aa7.36□□□□□ -1.23
LRRC28-212ENST00000558911 ST8SIA5O15466 376 aa7.35□□□□□ -1.23
LRRC28-212ENST00000558911 PLA2G2CQ5R387 149 aa7.35□□□□□ -1.23
LRRC28-212ENST00000558911 GDF9O60383 454 aa7.33□□□□□ -1.24
LRRC28-212ENST00000558911 PRR20EP86478 221 aa7.33□□□□□ -1.24
LRRC28-212ENST00000558911 PRR20CP86479 221 aa7.33□□□□□ -1.24
LRRC28-212ENST00000558911 PRR20DP86480 221 aa7.33□□□□□ -1.24
LRRC28-212ENST00000558911 PRR20BP86481 221 aa7.33□□□□□ -1.24
LRRC28-212ENST00000558911 PRR20AP86496 221 aa7.33□□□□□ -1.24
LRRC28-212ENST00000558911 SCUBE3Q8IX30 993 aa7.33□□□□□ -1.24
LRRC28-212ENST00000558911 FCHSD2O94868 740 aa7.32□□□□□ -1.24
LRRC28-212ENST00000558911 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.31□□□□□ -1.24
LRRC28-212ENST00000558911 SPSB2Q99619 263 aa7.31□□□□□ -1.24
LRRC28-212ENST00000558911 SEMA3EO15041 775 aa7.3□□□□□ -1.24
LRRC28-212ENST00000558911 RDH13Q8NBN7 331 aa7.3□□□□□ -1.24
LRRC28-212ENST00000558911 RSPH4AQ5TD94 716 aa7.29□□□□□ -1.24
LRRC28-212ENST00000558911 AAASQ9NRG9 546 aa7.29□□□□□ -1.24
LRRC28-212ENST00000558911 OATP04181 439 aa7.28□□□□□ -1.24
LRRC28-212ENST00000558911 PXYLP1Q8TE99 480 aa7.28□□□□□ -1.24
LRRC28-212ENST00000558911 NLRP7Q8WX94 980 aa7.27□□□□□ -1.25
LRRC28-212ENST00000558911 FCF1Q9Y324 198 aaKnown RBP7.27□□□□□ -1.25
LRRC28-212ENST00000558911 DDX11L8A8MPP1 907 aa7.26□□□□□ -1.25
LRRC28-212ENST00000558911 PKD2L1Q9P0L9 805 aa7.26□□□□□ -1.25
LRRC28-212ENST00000558911 DACH1Q9UI36 760 aa7.26□□□□□ -1.25
LRRC28-212ENST00000558911 RBM26Q5T8P6 1007 aaKnown RBP7.25□□□□□ -1.25
LRRC28-212ENST00000558911 METTL3Q86U44 580 aaKnown RBP7.25□□□□□ -1.25
LRRC28-212ENST00000558911 CYP4X1Q8N118 509 aa7.25□□□□□ -1.25
LRRC28-212ENST00000558911 FECHP22830 423 aa7.24□□□□□ -1.25
LRRC28-212ENST00000558911 FUT2Q10981 343 aa7.24□□□□□ -1.25
LRRC28-212ENST00000558911 CD2BP2O95400 341 aaKnown RBP7.23□□□□□ -1.25
LRRC28-212ENST00000558911 TREML4Q6UXN2 200 aa7.23□□□□□ -1.25
LRRC28-212ENST00000558911 PRDM9Q9NQV7 894 aa7.23□□□□□ -1.25
LRRC28-212ENST00000558911 GMPR2Q9P2T1 348 aaKnown RBP7.23□□□□□ -1.25
LRRC28-212ENST00000558911 TTC24A2A3L6 582 aaPredicted RBP7.22□□□□□ -1.25
LRRC28-212ENST00000558911 AXIN1O15169 862 aa7.22□□□□□ -1.25
LRRC28-212ENST00000558911 ZBTB24O43167 697 aaPredicted RBP7.22□□□□□ -1.25
LRRC28-212ENST00000558911 HIC1Q14526 733 aa7.22□□□□□ -1.25
LRRC28-212ENST00000558911 MORN1Q5T089 497 aa7.22□□□□□ -1.25
LRRC28-212ENST00000558911 P3H3Q8IVL6 736 aa7.22□□□□□ -1.25
LRRC28-212ENST00000558911 SLC27A5Q9Y2P5 690 aa7.22□□□□□ -1.25
LRRC28-212ENST00000558911 C11orf95C9JLR9 678 aaPredicted RBP7.21□□□□□ -1.26
LRRC28-212ENST00000558911 FMNL1O95466 1100 aaPredicted RBP7.21□□□□□ -1.26
LRRC28-212ENST00000558911 ATP6V1AP38606 617 aa7.21□□□□□ -1.26
LRRC28-212ENST00000558911 RPIAP49247 311 aa7.21□□□□□ -1.26
LRRC28-212ENST00000558911 DAXXQ9UER7 740 aaPredicted RBP7.21□□□□□ -1.26
LRRC28-212ENST00000558911 FAM160A2Q8N612 972 aaPredicted RBP7.2□□□□□ -1.26
LRRC28-212ENST00000558911 GNPATO15228 680 aa7.19□□□□□ -1.26
LRRC28-212ENST00000558911 LMOD2Q6P5Q4 547 aa7.19□□□□□ -1.26
LRRC28-212ENST00000558911 THAP11Q96EK4 314 aa7.19□□□□□ -1.26
LRRC28-212ENST00000558911 TOR4AQ9NXH8 423 aa7.19□□□□□ -1.26
LRRC28-212ENST00000558911 WFS1O76024 890 aa7.18□□□□□ -1.26
LRRC28-212ENST00000558911 RNF19BQ6ZMZ0 732 aa7.18□□□□□ -1.26
LRRC28-212ENST00000558911 GCGRP47871 477 aa7.16□□□□□ -1.26
LRRC28-212ENST00000558911 SMYD5Q6GMV2 418 aa7.16□□□□□ -1.26
LRRC28-212ENST00000558911 SULF1Q8IWU6 871 aa7.16□□□□□ -1.26
LRRC28-212ENST00000558911 AVPP01185 164 aa7.15□□□□□ -1.26
LRRC28-212ENST00000558911 CTC1Q2NKJ3 1217 aa7.14□□□□□ -1.27
LRRC28-212ENST00000558911 LCE2AQ5TA79 106 aaPredicted RBP7.14□□□□□ -1.27
LRRC28-212ENST00000558911 BRICD5Q6PL45 260 aa7.14□□□□□ -1.27
LRRC28-212ENST00000558911 CRIPAKQ8N1N5 446 aa7.14□□□□□ -1.27
LRRC28-212ENST00000558911 CCDC24Q8N4L8 307 aa7.14□□□□□ -1.27
LRRC28-212ENST00000558911 PHOX2BQ99453 314 aa7.14□□□□□ -1.27
LRRC28-212ENST00000558911 TESPA1A2RU30 521 aaPredicted RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms