RNA–Protein interactions for RNA: ENST00000558881.1

EXD1-204, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

TSL 2

Gene EXD1, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-204ENST00000558881 RIMBP3Q9UFD9 1639 aa11.88□□□□□ -0.51
EXD1-204ENST00000558881 NBPF1Q3BBV0 1214 aa11.88□□□□□ -0.51
EXD1-204ENST00000558881 KIDINS220Q9ULH0 1771 aa11.88□□□□□ -0.51
EXD1-204ENST00000558881 KANK1Q14678 1352 aa11.87□□□□□ -0.51
EXD1-204ENST00000558881 PLCD3Q8N3E9 789 aa11.87□□□□□ -0.51
EXD1-204ENST00000558881 IPO9Q96P70 1041 aaKnown RBP11.87□□□□□ -0.51
EXD1-204ENST00000558881 PRAG1Q86YV5 1406 aa11.87□□□□□ -0.51
EXD1-204ENST00000558881 ST20-MTHFSA0A0A6YYL1 179 aa11.86□□□□□ -0.51
EXD1-204ENST00000558881 CNTLNQ9NXG0 1405 aa11.86□□□□□ -0.51
EXD1-204ENST00000558881 E9PCH4 1651 aa11.86□□□□□ -0.51
EXD1-204ENST00000558881 DEPDC5O75140 1603 aa11.86□□□□□ -0.51
EXD1-204ENST00000558881 ROCK2O75116 1388 aaKnown RBP11.86□□□□□ -0.51
EXD1-204ENST00000558881 POLR3GLQ9BT43 218 aa11.86□□□□□ -0.51
EXD1-204ENST00000558881 STAG3Q9UJ98 1225 aa11.86□□□□□ -0.51
EXD1-204ENST00000558881 KDM5CP41229 1560 aa11.85□□□□□ -0.51
EXD1-204ENST00000558881 VWDEQ8N2E2 1590 aa11.85□□□□□ -0.51
EXD1-204ENST00000558881 PTPRTO14522 1441 aa11.85□□□□□ -0.51
EXD1-204ENST00000558881 MLH3Q9UHC1 1453 aa11.85□□□□□ -0.51
EXD1-204ENST00000558881 FAM69CQ0P6D2 419 aa11.85□□□□□ -0.51
EXD1-204ENST00000558881 NEO1Q92859 1461 aa11.84□□□□□ -0.51
EXD1-204ENST00000558881 BCORL1Q5H9F3 1711 aa11.84□□□□□ -0.51
EXD1-204ENST00000558881 DSG3P32926 999 aa11.84□□□□□ -0.51
EXD1-204ENST00000558881 ANP32AP39687 249 aaKnown RBP11.84□□□□□ -0.51
EXD1-204ENST00000558881 GGT6Q6P531 493 aa11.84□□□□□ -0.51
EXD1-204ENST00000558881 MROH1Q8NDA8 1641 aa11.84□□□□□ -0.51
EXD1-204ENST00000558881 CFAP74Q9C0B2 1584 aa11.84□□□□□ -0.51
EXD1-204ENST00000558881 B4GALNT3Q6L9W6 998 aa11.83□□□□□ -0.52
EXD1-204ENST00000558881 VSIG10Q8N0Z9 540 aa11.83□□□□□ -0.52
EXD1-204ENST00000558881 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.83□□□□□ -0.52
EXD1-204ENST00000558881 EIF2AK4Q9P2K8 1649 aaKnown RBP11.82□□□□□ -0.52
EXD1-204ENST00000558881 PRDM15P57071 1507 aaPredicted RBP11.82□□□□□ -0.52
EXD1-204ENST00000558881 SPDYE2BA6NHP3 402 aa11.82□□□□□ -0.52
EXD1-204ENST00000558881 SPDYE6P0CI01 402 aa11.82□□□□□ -0.52
EXD1-204ENST00000558881 SPDYE2Q495Y8 402 aa11.82□□□□□ -0.52
EXD1-204ENST00000558881 USP35Q9P2H5 1018 aa11.82□□□□□ -0.52
EXD1-204ENST00000558881 FRMPD1Q5SYB0 1578 aa11.82□□□□□ -0.52
EXD1-204ENST00000558881 TRPM2O94759 1503 aa11.82□□□□□ -0.52
EXD1-204ENST00000558881 TET3O43151 1660 aa11.82□□□□□ -0.52
EXD1-204ENST00000558881 ZBTB47Q9UFB7 747 aaPredicted RBP11.81□□□□□ -0.52
EXD1-204ENST00000558881 WASHC2CQ9Y4E1 1318 aa11.81□□□□□ -0.52
EXD1-204ENST00000558881 CCDC184Q52MB2 194 aa11.81□□□□□ -0.52
EXD1-204ENST00000558881 BBXQ8WY36 941 aaPredicted RBP11.81□□□□□ -0.52
EXD1-204ENST00000558881 PRKRIP1Q9H875 184 aaPredicted RBP11.81□□□□□ -0.52
EXD1-204ENST00000558881 SSUH2Q9Y2M2 353 aa11.8□□□□□ -0.52
EXD1-204ENST00000558881 TRPM1Q7Z4N2 1603 aa11.8□□□□□ -0.52
EXD1-204ENST00000558881 HECW2Q9P2P5 1572 aa11.8□□□□□ -0.52
EXD1-204ENST00000558881 MAP3K4Q9Y6R4 1608 aa11.8□□□□□ -0.52
EXD1-204ENST00000558881 GPRASP1Q5JY77 1395 aa11.8□□□□□ -0.52
EXD1-204ENST00000558881 CLTCL1P53675 1640 aa11.79□□□□□ -0.52
EXD1-204ENST00000558881 ARID4BQ4LE39 1312 aaPredicted RBP11.79□□□□□ -0.52
EXD1-204ENST00000558881 GLI2P10070 1586 aa11.79□□□□□ -0.52
EXD1-204ENST00000558881 CNGB1Q14028 1251 aaPredicted RBP11.79□□□□□ -0.52
EXD1-204ENST00000558881 PAXIP1Q6ZW49 1069 aaPredicted RBP11.79□□□□□ -0.52
EXD1-204ENST00000558881 ABCA6Q8N139 1617 aa11.78□□□□□ -0.52
EXD1-204ENST00000558881 UGGT1Q9NYU2 1555 aa11.78□□□□□ -0.52
EXD1-204ENST00000558881 SPHKAPQ2M3C7 1700 aa11.78□□□□□ -0.52
EXD1-204ENST00000558881 YEATS2Q9ULM3 1422 aa11.77□□□□□ -0.52
EXD1-204ENST00000558881 EFCAB6Q5THR3 1501 aa11.77□□□□□ -0.53
EXD1-204ENST00000558881 LMTK2Q8IWU2 1503 aa11.77□□□□□ -0.53
EXD1-204ENST00000558881 RGL2O15211 777 aa11.77□□□□□ -0.53
EXD1-204ENST00000558881 CFAP44Q96MT7 982 aa11.77□□□□□ -0.53
EXD1-204ENST00000558881 PPRC1Q5VV67 1664 aaKnown RBP11.76□□□□□ -0.53
EXD1-204ENST00000558881 POLR1AO95602 1720 aaPredicted RBP11.76□□□□□ -0.53
EXD1-204ENST00000558881 RNF17Q9BXT8 1623 aaKnown RBP11.76□□□□□ -0.53
EXD1-204ENST00000558881 TESK2Q96S53 571 aa11.76□□□□□ -0.53
EXD1-204ENST00000558881 ZBED9Q6R2W3 1325 aa11.76□□□□□ -0.53
EXD1-204ENST00000558881 NPATQ14207 1427 aa11.75□□□□□ -0.53
EXD1-204ENST00000558881 DIP2BQ9P265 1576 aa11.75□□□□□ -0.53
EXD1-204ENST00000558881 DIP2CQ9Y2E4 1556 aa11.75□□□□□ -0.53
EXD1-204ENST00000558881 CHGAP10645 457 aaKnown RBP11.74□□□□□ -0.53
EXD1-204ENST00000558881 STAC3Q96MF2 364 aa11.74□□□□□ -0.53
EXD1-204ENST00000558881 CEP152O94986 1710 aa11.74□□□□□ -0.53
EXD1-204ENST00000558881 RICTORQ6R327 1708 aa11.74□□□□□ -0.53
EXD1-204ENST00000558881 ADGRF5Q8IZF2 1346 aa11.74□□□□□ -0.53
EXD1-204ENST00000558881 MADDQ8WXG6 1647 aa11.72□□□□□ -0.53
EXD1-204ENST00000558881 ABCC3O15438 1527 aa11.72□□□□□ -0.53
EXD1-204ENST00000558881 CFAP70Q5T0N1 1121 aa11.72□□□□□ -0.53
EXD1-204ENST00000558881 MRS2Q9HD23 443 aa11.72□□□□□ -0.53
EXD1-204ENST00000558881 DISP3Q9P2K9 1392 aa11.72□□□□□ -0.53
EXD1-204ENST00000558881 LAMC1P11047 1609 aa11.71□□□□□ -0.53
EXD1-204ENST00000558881 FAM9BQ8IZU0 186 aa11.7□□□□□ -0.54
EXD1-204ENST00000558881 NEFMP07197 916 aa11.7□□□□□ -0.54
EXD1-204ENST00000558881 TSPOAP1O95153 1857 aa11.69□□□□□ -0.54
EXD1-204ENST00000558881 CIZ1Q9ULV3 898 aaPredicted RBP11.69□□□□□ -0.54
EXD1-204ENST00000558881 RNF123Q5XPI4 1314 aa11.69□□□□□ -0.54
EXD1-204ENST00000558881 TMF1P82094 1093 aa11.69□□□□□ -0.54
EXD1-204ENST00000558881 NEURL4Q96JN8 1562 aa11.68□□□□□ -0.54
EXD1-204ENST00000558881 COL17A1Q9UMD9 1497 aaPredicted RBP11.68□□□□□ -0.54
EXD1-204ENST00000558881 PPM1GO15355 546 aaPredicted RBP11.68□□□□□ -0.54
EXD1-204ENST00000558881 NOS1P29475 1434 aa11.67□□□□□ -0.54
EXD1-204ENST00000558881 SMG6Q86US8 1419 aaKnown RBP11.67□□□□□ -0.54
EXD1-204ENST00000558881 PER1O15534 1290 aaPredicted RBP11.67□□□□□ -0.54
EXD1-204ENST00000558881 POTEDQ86YR6 584 aa11.67□□□□□ -0.54
EXD1-204ENST00000558881 TAOK2Q9UL54 1235 aa11.67□□□□□ -0.54
EXD1-204ENST00000558881 MROH2AA6NES4 1674 aa11.67□□□□□ -0.54
EXD1-204ENST00000558881 MYOM2P54296 1465 aa11.67□□□□□ -0.54
EXD1-204ENST00000558881 SCAF11Q99590 1463 aaKnown RBP11.67□□□□□ -0.54
EXD1-204ENST00000558881 CFAP65Q6ZU64 1925 aaKnown RBP11.66□□□□□ -0.54
EXD1-204ENST00000558881 IDI1Q13907 227 aa11.66□□□□□ -0.54
EXD1-204ENST00000558881 PKNOX2Q96KN3 472 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms