RNA–Protein interactions for RNA: ENST00000558816.5

SEMA6D-210, Transcript of semaphorin 6D, humanhuman

TSL 5 BASIC

Gene SEMA6D, Length 4,419 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-210ENST00000558816 ERICH6BQ5W0A0 696 aa7.46□□□□□ -1.22
SEMA6D-210ENST00000558816 CFAP53Q96M91 514 aa7.46□□□□□ -1.22
SEMA6D-210ENST00000558816 ZNF644Q9H582 1327 aaPredicted RBP7.46□□□□□ -1.22
SEMA6D-210ENST00000558816 WDR43Q15061 677 aaKnown RBP eCLIP7.45□□□□□ -1.22
SEMA6D-210ENST00000558816 MROH2AA6NES4 1674 aa7.45□□□□□ -1.22
SEMA6D-210ENST00000558816 EIF4G2P78344 907 aaKnown RBP eCLIP7.45□□□□□ -1.22
SEMA6D-210ENST00000558816 PLEKHG5O94827 1062 aa7.45□□□□□ -1.22
SEMA6D-210ENST00000558816 PTPRTO14522 1441 aa7.44□□□□□ -1.22
SEMA6D-210ENST00000558816 WASHC2CQ9Y4E1 1318 aa7.44□□□□□ -1.22
SEMA6D-210ENST00000558816 KTN1Q86UP2 1357 aaKnown RBP7.44□□□□□ -1.22
SEMA6D-210ENST00000558816 KIF3BO15066 747 aa7.43□□□□□ -1.22
SEMA6D-210ENST00000558816 FOXD4L1Q9NU39 408 aa7.43□□□□□ -1.22
SEMA6D-210ENST00000558816 KIF15Q9NS87 1388 aa7.43□□□□□ -1.22
SEMA6D-210ENST00000558816 DMRT2Q9Y5R5 561 aa7.43□□□□□ -1.22
SEMA6D-210ENST00000558816 STAC3Q96MF2 364 aa7.43□□□□□ -1.22
SEMA6D-210ENST00000558816 ERBINQ96RT1 1412 aa7.43□□□□□ -1.22
SEMA6D-210ENST00000558816 MPHOSPH9Q99550 1183 aa7.43□□□□□ -1.22
SEMA6D-210ENST00000558816 BLMP54132 1417 aaPredicted RBP7.42□□□□□ -1.22
SEMA6D-210ENST00000558816 MLH3Q9UHC1 1453 aa7.42□□□□□ -1.22
SEMA6D-210ENST00000558816 COL17A1Q9UMD9 1497 aaPredicted RBP7.42□□□□□ -1.22
SEMA6D-210ENST00000558816 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.42□□□□□ -1.22
SEMA6D-210ENST00000558816 CLTCL1P53675 1640 aa7.42□□□□□ -1.22
SEMA6D-210ENST00000558816 MAP3K4Q9Y6R4 1608 aa7.42□□□□□ -1.22
SEMA6D-210ENST00000558816 SMG6Q86US8 1419 aaKnown RBP7.42□□□□□ -1.22
SEMA6D-210ENST00000558816 TSHZ2Q9NRE2 1034 aa7.41□□□□□ -1.22
SEMA6D-210ENST00000558816 A2MP01023 1474 aa7.41□□□□□ -1.22
SEMA6D-210ENST00000558816 CCDC7Q96M83 1385 aa7.41□□□□□ -1.22
SEMA6D-210ENST00000558816 HECW2Q9P2P5 1572 aa7.41□□□□□ -1.22
SEMA6D-210ENST00000558816 KIDINS220Q9ULH0 1771 aa7.41□□□□□ -1.22
SEMA6D-210ENST00000558816 WASHC2AQ641Q2 1341 aa7.41□□□□□ -1.22
SEMA6D-210ENST00000558816 NUDCQ9Y266 331 aa7.41□□□□□ -1.22
SEMA6D-210ENST00000558816 KNSTRNQ9Y448 316 aa7.4□□□□□ -1.22
SEMA6D-210ENST00000558816 NUP155O75694 1391 aa7.4□□□□□ -1.22
SEMA6D-210ENST00000558816 CARD11Q9BXL7 1154 aa7.4□□□□□ -1.22
SEMA6D-210ENST00000558816 MYOM2P54296 1465 aa7.4□□□□□ -1.23
SEMA6D-210ENST00000558816 PKD2Q13563 968 aa7.4□□□□□ -1.23
SEMA6D-210ENST00000558816 ATP7AQ04656 1500 aa7.4□□□□□ -1.23
SEMA6D-210ENST00000558816 SIGLEC1Q9BZZ2 1709 aa7.39□□□□□ -1.23
SEMA6D-210ENST00000558816 KDM5AP29375 1690 aaKnown RBP7.39□□□□□ -1.23
SEMA6D-210ENST00000558816 N4BP2Q86UW6 1770 aaPredicted RBP7.39□□□□□ -1.23
SEMA6D-210ENST00000558816 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.39□□□□□ -1.23
SEMA6D-210ENST00000558816 USP54Q70EL1 1684 aa7.39□□□□□ -1.23
SEMA6D-210ENST00000558816 ANKRD50Q9ULJ7 1429 aa7.39□□□□□ -1.23
SEMA6D-210ENST00000558816 SYCP2Q9BX26 1530 aa7.39□□□□□ -1.23
SEMA6D-210ENST00000558816 FOXD1Q16676 465 aa7.38□□□□□ -1.23
SEMA6D-210ENST00000558816 REREQ9P2R6 1566 aa7.38□□□□□ -1.23
SEMA6D-210ENST00000558816 PRAG1Q86YV5 1406 aa7.38□□□□□ -1.23
SEMA6D-210ENST00000558816 ADGRB2O60241 1585 aa7.38□□□□□ -1.23
SEMA6D-210ENST00000558816 FRMPD1Q5SYB0 1578 aa7.38□□□□□ -1.23
SEMA6D-210ENST00000558816 PNNQ9H307 717 aaKnown RBP7.38□□□□□ -1.23
SEMA6D-210ENST00000558816 CAMSAP1Q5T5Y3 1602 aa7.37□□□□□ -1.23
SEMA6D-210ENST00000558816 NPHP1O15259 732 aa7.37□□□□□ -1.23
SEMA6D-210ENST00000558816 RAPGEF3O95398 923 aa7.37□□□□□ -1.23
SEMA6D-210ENST00000558816 DDX10Q13206 875 aaKnown RBP7.37□□□□□ -1.23
SEMA6D-210ENST00000558816 AFAP1Q8N556 730 aa7.37□□□□□ -1.23
SEMA6D-210ENST00000558816 ADGRB3O60242 1522 aa7.37□□□□□ -1.23
SEMA6D-210ENST00000558816 SRPK2P78362 688 aaKnown RBP7.37□□□□□ -1.23
SEMA6D-210ENST00000558816 SLC52A1Q9NWF4 448 aa7.37□□□□□ -1.23
SEMA6D-210ENST00000558816 ARHGEF28Q8N1W1 1705 aaKnown RBP7.37□□□□□ -1.23
SEMA6D-210ENST00000558816 TMEM131LA2VDJ0 1609 aa7.37□□□□□ -1.23
SEMA6D-210ENST00000558816 THEMISQ8N1K5 641 aaPredicted RBP7.36□□□□□ -1.23
SEMA6D-210ENST00000558816 ARHGEF40Q8TER5 1519 aa7.36□□□□□ -1.23
SEMA6D-210ENST00000558816 KIF1BO60333 1816 aa7.36□□□□□ -1.23
SEMA6D-210ENST00000558816 TSPOAP1O95153 1857 aa7.36□□□□□ -1.23
SEMA6D-210ENST00000558816 FANCIQ9NVI1 1328 aa7.36□□□□□ -1.23
SEMA6D-210ENST00000558816 RICTORQ6R327 1708 aa7.36□□□□□ -1.23
SEMA6D-210ENST00000558816 AGLP35573 1532 aa7.36□□□□□ -1.23
SEMA6D-210ENST00000558816 PPM1GO15355 546 aaPredicted RBP7.36□□□□□ -1.23
SEMA6D-210ENST00000558816 HDGFL2Q7Z4V5 671 aaPredicted RBP7.36□□□□□ -1.23
SEMA6D-210ENST00000558816 TUBGCP6Q96RT7 1819 aa7.36□□□□□ -1.23
SEMA6D-210ENST00000558816 TMF1P82094 1093 aa7.35□□□□□ -1.23
SEMA6D-210ENST00000558816 BCL11AQ9H165 835 aa7.35□□□□□ -1.23
SEMA6D-210ENST00000558816 PARD3Q8TEW0 1356 aa7.35□□□□□ -1.23
SEMA6D-210ENST00000558816 CDC42BPGQ6DT37 1551 aa7.35□□□□□ -1.23
SEMA6D-210ENST00000558816 CCDC144AA2RUR9 1427 aa7.35□□□□□ -1.23
SEMA6D-210ENST00000558816 EFCAB6Q5THR3 1501 aa7.35□□□□□ -1.23
SEMA6D-210ENST00000558816 ADGRB1O14514 1584 aa7.35□□□□□ -1.23
SEMA6D-210ENST00000558816 RIMS1Q86UR5 1692 aaKnown RBP7.35□□□□□ -1.23
SEMA6D-210ENST00000558816 HIRIP3Q9BW71 556 aaPredicted RBP7.34□□□□□ -1.23
SEMA6D-210ENST00000558816 MAPK8IP3Q9UPT6 1336 aa7.34□□□□□ -1.23
SEMA6D-210ENST00000558816 DCAF11Q8TEB1 546 aa7.34□□□□□ -1.23
SEMA6D-210ENST00000558816 UGGT1Q9NYU2 1555 aa7.34□□□□□ -1.23
SEMA6D-210ENST00000558816 MYH16Q9H6N6 1097 aa7.34□□□□□ -1.23
SEMA6D-210ENST00000558816 KNDC1Q76NI1 1749 aa7.33□□□□□ -1.24
SEMA6D-210ENST00000558816 CHMP4AQ9BY43 222 aa7.33□□□□□ -1.24
SEMA6D-210ENST00000558816 RPGRIP1LQ68CZ1 1315 aa7.33□□□□□ -1.24
SEMA6D-210ENST00000558816 CCDC9Q9Y3X0 531 aaKnown RBP7.33□□□□□ -1.24
SEMA6D-210ENST00000558816 TRAPPC8Q9Y2L5 1435 aa7.33□□□□□ -1.24
SEMA6D-210ENST00000558816 NPC1L1Q9UHC9 1359 aa7.33□□□□□ -1.24
SEMA6D-210ENST00000558816 CSB-PGBD3P0DP91 1061 aa7.33□□□□□ -1.24
SEMA6D-210ENST00000558816 ANP32EQ9BTT0 268 aa7.32□□□□□ -1.24
SEMA6D-210ENST00000558816 ZBED9Q6R2W3 1325 aa7.32□□□□□ -1.24
SEMA6D-210ENST00000558816 VGFO15240 615 aaPredicted RBP7.32□□□□□ -1.24
SEMA6D-210ENST00000558816 L3MBTL2Q969R5 705 aa7.32□□□□□ -1.24
SEMA6D-210ENST00000558816 TNRQ92752 1358 aa7.32□□□□□ -1.24
SEMA6D-210ENST00000558816 C11orf95C9JLR9 678 aaPredicted RBP7.32□□□□□ -1.24
SEMA6D-210ENST00000558816 VSIG10Q8N0Z9 540 aa7.32□□□□□ -1.24
SEMA6D-210ENST00000558816 CFAP44Q96MT7 982 aa7.32□□□□□ -1.24
SEMA6D-210ENST00000558816 STK26Q9P289 416 aa7.32□□□□□ -1.24
SEMA6D-210ENST00000558816 ABCC3O15438 1527 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms