RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-215ENST00000558787 TAOK2Q9UL54 1235 aa11.2□□□□□ -0.62
MARK3-215ENST00000558787 ITSN2Q9NZM3 1697 aa11.2□□□□□ -0.62
MARK3-215ENST00000558787 SAMD9LQ8IVG5 1584 aa11.2□□□□□ -0.62
MARK3-215ENST00000558787 SPAG9O60271 1321 aaKnown RBP11.19□□□□□ -0.62
MARK3-215ENST00000558787 SYCP2Q9BX26 1530 aa11.19□□□□□ -0.62
MARK3-215ENST00000558787 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.18□□□□□ -0.62
MARK3-215ENST00000558787 ST18O60284 1047 aa11.18□□□□□ -0.62
MARK3-215ENST00000558787 ZFP91Q96JP5 570 aaPredicted RBP11.18□□□□□ -0.62
MARK3-215ENST00000558787 BOLA1Q9Y3E2 137 aa11.18□□□□□ -0.62
MARK3-215ENST00000558787 KIDINS220Q9ULH0 1771 aa11.18□□□□□ -0.62
MARK3-215ENST00000558787 SOX12O15370 315 aa11.16□□□□□ -0.62
MARK3-215ENST00000558787 ESF1Q9H501 851 aaKnown RBP11.16□□□□□ -0.62
MARK3-215ENST00000558787 ECM2O94769 699 aaPredicted RBP11.15□□□□□ -0.62
MARK3-215ENST00000558787 FBXO41Q8TF61 875 aa11.15□□□□□ -0.62
MARK3-215ENST00000558787 REREQ9P2R6 1566 aa11.15□□□□□ -0.62
MARK3-215ENST00000558787 AGLP35573 1532 aa11.14□□□□□ -0.63
MARK3-215ENST00000558787 KIAA1107Q9UPP5 1409 aa11.14□□□□□ -0.63
MARK3-215ENST00000558787 TIAM1Q13009 1591 aa11.13□□□□□ -0.63
MARK3-215ENST00000558787 PLEKHH2Q8IVE3 1493 aa11.12□□□□□ -0.63
MARK3-215ENST00000558787 GGT6Q6P531 493 aa11.12□□□□□ -0.63
MARK3-215ENST00000558787 TMEM121BQ9BXQ6 578 aaPredicted RBP11.12□□□□□ -0.63
MARK3-215ENST00000558787 ATP7AQ04656 1500 aa11.12□□□□□ -0.63
MARK3-215ENST00000558787 SUPT6HQ7KZ85 1726 aaKnown RBP11.12□□□□□ -0.63
MARK3-215ENST00000558787 C3P01024 1663 aa11.11□□□□□ -0.63
MARK3-215ENST00000558787 UHRF1BP1Q6BDS2 1440 aa11.11□□□□□ -0.63
MARK3-215ENST00000558787 EHBP1L1Q8N3D4 1523 aa11.11□□□□□ -0.63
MARK3-215ENST00000558787 A2MP01023 1474 aa11.11□□□□□ -0.63
MARK3-215ENST00000558787 MBD5Q9P267 1494 aa11.11□□□□□ -0.63
MARK3-215ENST00000558787 PREX1Q8TCU6 1659 aa11.11□□□□□ -0.63
MARK3-215ENST00000558787 ZMYM3Q14202 1370 aa11.1□□□□□ -0.63
MARK3-215ENST00000558787 NCOA2Q15596 1464 aa11.1□□□□□ -0.63
MARK3-215ENST00000558787 INO80Q9ULG1 1556 aaPredicted RBP11.09□□□□□ -0.63
MARK3-215ENST00000558787 KANK4Q5T7N3 995 aaPredicted RBP11.09□□□□□ -0.63
MARK3-215ENST00000558787 CERKQ8TCT0 537 aa11.09□□□□□ -0.63
MARK3-215ENST00000558787 BCL11BQ9C0K0 894 aaPredicted RBP11.08□□□□□ -0.64
MARK3-215ENST00000558787 SETD1BQ9UPS6 1966 aaKnown RBP11.08□□□□□ -0.64
MARK3-215ENST00000558787 CNTLNQ9NXG0 1405 aa11.08□□□□□ -0.64
MARK3-215ENST00000558787 CDAN1Q8IWY9 1227 aa11.07□□□□□ -0.64
MARK3-215ENST00000558787 STK24Q9Y6E0 443 aa11.07□□□□□ -0.64
MARK3-215ENST00000558787 STRCQ7RTU9 1775 aa11.07□□□□□ -0.64
MARK3-215ENST00000558787 VPS8Q8N3P4 1428 aa11.07□□□□□ -0.64
MARK3-215ENST00000558787 PKD2Q13563 968 aa11.06□□□□□ -0.64
MARK3-215ENST00000558787 PHF8Q9UPP1 1060 aa11.06□□□□□ -0.64
MARK3-215ENST00000558787 PLXNC1O60486 1568 aa11.06□□□□□ -0.64
MARK3-215ENST00000558787 CAMSAP2Q08AD1 1489 aa11.06□□□□□ -0.64
MARK3-215ENST00000558787 CLTCQ00610 1675 aaKnown RBP11.05□□□□□ -0.64
MARK3-215ENST00000558787 KIF3BO15066 747 aa11.05□□□□□ -0.64
MARK3-215ENST00000558787 LRRC9Q6ZRR7 1453 aa11.05□□□□□ -0.64
MARK3-215ENST00000558787 DHX29Q7Z478 1369 aaKnown RBP11.04□□□□□ -0.64
MARK3-215ENST00000558787 STK25O00506 426 aa11.04□□□□□ -0.64
MARK3-215ENST00000558787 NLRP6P59044 892 aa11.04□□□□□ -0.64
MARK3-215ENST00000558787 NCKAP5LQ9HCH0 1330 aa11.04□□□□□ -0.64
MARK3-215ENST00000558787 RTEL1-TNFRSF6BF6WH68 1400 aa11.03□□□□□ -0.64
MARK3-215ENST00000558787 FBXO31Q5XUX0 539 aaPredicted RBP11.03□□□□□ -0.64
MARK3-215ENST00000558787 CCDC141Q6ZP82 1450 aa11.03□□□□□ -0.64
MARK3-215ENST00000558787 NPATQ14207 1427 aa11.02□□□□□ -0.64
MARK3-215ENST00000558787 PTPRKQ15262 1439 aa11.02□□□□□ -0.64
MARK3-215ENST00000558787 ADGBQ8N7X0 1667 aa11.02□□□□□ -0.64
MARK3-215ENST00000558787 MICALL2Q8IY33 904 aa11.02□□□□□ -0.65
MARK3-215ENST00000558787 MARVELD3Q96A59 401 aa11.02□□□□□ -0.65
MARK3-215ENST00000558787 MROH2AA6NES4 1674 aa11.01□□□□□ -0.65
MARK3-215ENST00000558787 NCOA1Q15788 1441 aa11.01□□□□□ -0.65
MARK3-215ENST00000558787 RGL2O15211 777 aa11.01□□□□□ -0.65
MARK3-215ENST00000558787 TSPY4P0CV99 314 aa11.01□□□□□ -0.65
MARK3-215ENST00000558787 TSPY10P0CW01 314 aa11.01□□□□□ -0.65
MARK3-215ENST00000558787 RSPH4AQ5TD94 716 aa11.01□□□□□ -0.65
MARK3-215ENST00000558787 MS4A4AQ96JQ5 239 aa11.01□□□□□ -0.65
MARK3-215ENST00000558787 CAMSAP1Q5T5Y3 1602 aa11□□□□□ -0.65
MARK3-215ENST00000558787 PTPRTO14522 1441 aa11□□□□□ -0.65
MARK3-215ENST00000558787 WASHC2CQ9Y4E1 1318 aa10.99□□□□□ -0.65
MARK3-215ENST00000558787 ARHGEF5Q12774 1597 aa10.98□□□□□ -0.65
MARK3-215ENST00000558787 EMP3P54852 163 aa10.97□□□□□ -0.65
MARK3-215ENST00000558787 ZNF710Q8N1W2 664 aa10.97□□□□□ -0.65
MARK3-215ENST00000558787 MYOM3Q5VTT5 1437 aa10.97□□□□□ -0.65
MARK3-215ENST00000558787 MAP3K1Q13233 1512 aa10.97□□□□□ -0.65
MARK3-215ENST00000558787 MYO3AQ8NEV4 1616 aa10.96□□□□□ -0.65
MARK3-215ENST00000558787 ZNF335Q9H4Z2 1342 aaPredicted RBP10.96□□□□□ -0.65
MARK3-215ENST00000558787 DOK7Q18PE1 504 aa10.96□□□□□ -0.65
MARK3-215ENST00000558787 CEP170BQ9Y4F5 1589 aaPredicted RBP10.95□□□□□ -0.66
MARK3-215ENST00000558787 TNRQ92752 1358 aa10.95□□□□□ -0.66
MARK3-215ENST00000558787 FBXO22Q8NEZ5 403 aa10.95□□□□□ -0.66
MARK3-215ENST00000558787 LTBP4Q8N2S1 1624 aa10.95□□□□□ -0.66
MARK3-215ENST00000558787 MIA2Q96PC5 1412 aa10.94□□□□□ -0.66
MARK3-215ENST00000558787 HOXB3P14651 431 aaPredicted RBP10.94□□□□□ -0.66
MARK3-215ENST00000558787 RRP7BPQ9NSQ0 103 aa10.94□□□□□ -0.66
MARK3-215ENST00000558787 KDM5DQ9BY66 1539 aa10.94□□□□□ -0.66
MARK3-215ENST00000558787 A2ML1A8K2U0 1454 aa10.93□□□□□ -0.66
MARK3-215ENST00000558787 MFRPQ9BY79 579 aa10.93□□□□□ -0.66
MARK3-215ENST00000558787 RIMBP2O15034 1052 aa10.92□□□□□ -0.66
MARK3-215ENST00000558787 CHIC2Q9UKJ5 165 aa10.92□□□□□ -0.66
MARK3-215ENST00000558787 PZPP20742 1482 aa10.92□□□□□ -0.66
MARK3-215ENST00000558787 TCOF1Q13428 1488 aaKnown RBP10.92□□□□□ -0.66
MARK3-215ENST00000558787 ABCC5O15440 1437 aa10.92□□□□□ -0.66
MARK3-215ENST00000558787 ZNF142P52746 1687 aaPredicted RBP10.92□□□□□ -0.66
MARK3-215ENST00000558787 DNMT1P26358 1616 aaKnown RBP10.91□□□□□ -0.66
MARK3-215ENST00000558787 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.91□□□□□ -0.66
MARK3-215ENST00000558787 MAST1Q9Y2H9 1570 aa10.91□□□□□ -0.66
MARK3-215ENST00000558787 TMEM92Q6UXU6 159 aa10.91□□□□□ -0.66
MARK3-215ENST00000558787 PLA2R1Q13018 1463 aa10.91□□□□□ -0.66
MARK3-215ENST00000558787 FAM205CA6NFA0 338 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms