RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 DUOX2Q9NRD8 1548 aa19.25■□□□□ 0.67
SMAD3-206ENST00000558739 AFF2P51816 1311 aa19.25■□□□□ 0.67
SMAD3-206ENST00000558739 SETBP1Q9Y6X0 1596 aa19.24■□□□□ 0.67
SMAD3-206ENST00000558739 NUTM2BA6NNL0 878 aaPredicted RBP19.24■□□□□ 0.67
SMAD3-206ENST00000558739 NUTM2EB1AL46 878 aaPredicted RBP19.24■□□□□ 0.67
SMAD3-206ENST00000558739 IDI1Q13907 227 aa19.24■□□□□ 0.67
SMAD3-206ENST00000558739 NUTM2AQ8IVF1 878 aaPredicted RBP19.24■□□□□ 0.67
SMAD3-206ENST00000558739 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.23■□□□□ 0.67
SMAD3-206ENST00000558739 MYO5BQ9ULV0 1848 aa19.22■□□□□ 0.67
SMAD3-206ENST00000558739 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.2■□□□□ 0.661e-9■■■□□ 16.9
SMAD3-206ENST00000558739 KIF15Q9NS87 1388 aa19.19■□□□□ 0.66
SMAD3-206ENST00000558739 BCANQ96GW7 911 aa19.18■□□□□ 0.66
SMAD3-206ENST00000558739 ZFYVE9O95405 1425 aa19.17■□□□□ 0.66
SMAD3-206ENST00000558739 ERBINQ96RT1 1412 aa19.16■□□□□ 0.66
SMAD3-206ENST00000558739 CROCC2H7BZ55 1655 aa19.15■□□□□ 0.66
SMAD3-206ENST00000558739 NUTM2DQ5VT03 806 aaPredicted RBP19.15■□□□□ 0.66
SMAD3-206ENST00000558739 C14orf37Q86TY3 774 aa19.15■□□□□ 0.66
SMAD3-206ENST00000558739 NOS1P29475 1434 aa19.15■□□□□ 0.66
SMAD3-206ENST00000558739 BRINP3Q76B58 766 aa19.14■□□□□ 0.65
SMAD3-206ENST00000558739 PLEKHG1Q9ULL1 1385 aa19.13■□□□□ 0.65
SMAD3-206ENST00000558739 LMTK2Q8IWU2 1503 aa19.13■□□□□ 0.65
SMAD3-206ENST00000558739 ASXL1Q8IXJ9 1541 aa19.13■□□□□ 0.65
SMAD3-206ENST00000558739 GCC2Q8IWJ2 1684 aa19.13■□□□□ 0.65
SMAD3-206ENST00000558739 C8orf37Q96NL8 207 aa19.12■□□□□ 0.65
SMAD3-206ENST00000558739 NHSL1Q5SYE7 1610 aa19.11■□□□□ 0.65
SMAD3-206ENST00000558739 QTRT2Q9H974 415 aaKnown RBP19.11■□□□□ 0.65
SMAD3-206ENST00000558739 RRP7BPQ9NSQ0 103 aa19.11■□□□□ 0.65
SMAD3-206ENST00000558739 RBM6P78332 1123 aaKnown RBP19.1■□□□□ 0.65
SMAD3-206ENST00000558739 RIMS2Q9UQ26 1411 aa19.09■□□□□ 0.65
SMAD3-206ENST00000558739 NCOA3Q9Y6Q9 1424 aa19.09■□□□□ 0.65
SMAD3-206ENST00000558739 ADAMTS13Q76LX8 1427 aa19.08■□□□□ 0.65
SMAD3-206ENST00000558739 SETD5Q9C0A6 1442 aa19.08■□□□□ 0.65
SMAD3-206ENST00000558739 ATAD2Q6PL18 1390 aa19.08■□□□□ 0.65
SMAD3-206ENST00000558739 ATF3P18847 181 aa19.08■□□□□ 0.64
SMAD3-206ENST00000558739 CADPS2Q86UW7 1296 aa19.08■□□□□ 0.64
SMAD3-206ENST00000558739 DDX17Q92841 729 aaKnown RBP19.07■□□□□ 0.64
SMAD3-206ENST00000558739 C19orf44Q9H6X5 657 aa19.07■□□□□ 0.64
SMAD3-206ENST00000558739 ZRANB1Q9UGI0 708 aa19.07■□□□□ 0.64
SMAD3-206ENST00000558739 ABCC5O15440 1437 aa19.07■□□□□ 0.64
SMAD3-206ENST00000558739 MYOM3Q5VTT5 1437 aa19.07■□□□□ 0.64
SMAD3-206ENST00000558739 TMEM131LA2VDJ0 1609 aa19.07■□□□□ 0.64
SMAD3-206ENST00000558739 KANK1Q14678 1352 aa19.06■□□□□ 0.64
SMAD3-206ENST00000558739 PNPLA6Q8IY17 1366 aa19.06■□□□□ 0.64
SMAD3-206ENST00000558739 PPP1R15AO75807 674 aaPredicted RBP19.05■□□□□ 0.64
SMAD3-206ENST00000558739 PTPRUQ92729 1446 aa19.04■□□□□ 0.64
SMAD3-206ENST00000558739 MST1RQ04912 1400 aa19.03■□□□□ 0.64
SMAD3-206ENST00000558739 ADAMTS2O95450 1211 aa19.02■□□□□ 0.64
SMAD3-206ENST00000558739 TBX22Q9Y458 520 aa19.01■□□□□ 0.63
SMAD3-206ENST00000558739 KANK4Q5T7N3 995 aaPredicted RBP19■□□□□ 0.63
SMAD3-206ENST00000558739 SLC52A1Q9NWF4 448 aa18.99■□□□□ 0.63
SMAD3-206ENST00000558739 TRPM2O94759 1503 aa18.99■□□□□ 0.63
SMAD3-206ENST00000558739 DCCP43146 1447 aa18.99■□□□□ 0.63
SMAD3-206ENST00000558739 XRN1Q8IZH2 1706 aaKnown RBP18.98■□□□□ 0.63
SMAD3-206ENST00000558739 DAPK1P53355 1430 aa18.98■□□□□ 0.63
SMAD3-206ENST00000558739 NGLY1Q96IV0 654 aa18.97■□□□□ 0.63
SMAD3-206ENST00000558739 PTPN23Q9H3S7 1636 aa18.96■□□□□ 0.63
SMAD3-206ENST00000558739 UNC13BO14795 1591 aa18.95■□□□□ 0.62
SMAD3-206ENST00000558739 LRRC59Q96AG4 307 aaKnown RBP18.95■□□□□ 0.62
SMAD3-206ENST00000558739 AMOTL2Q9Y2J4 779 aa18.95■□□□□ 0.62
SMAD3-206ENST00000558739 NRXN3Q9Y4C0 1643 aa18.94■□□□□ 0.62
SMAD3-206ENST00000558739 NALCNQ8IZF0 1738 aa18.94■□□□□ 0.62
SMAD3-206ENST00000558739 PIK3R4Q99570 1358 aa18.93■□□□□ 0.62
SMAD3-206ENST00000558739 ATRNO75882 1429 aa18.93■□□□□ 0.62
SMAD3-206ENST00000558739 RPRD2Q5VT52 1461 aaKnown RBP18.93■□□□□ 0.62
SMAD3-206ENST00000558739 USP21Q9UK80 565 aa18.93■□□□□ 0.62
SMAD3-206ENST00000558739 CHIC2Q9UKJ5 165 aa18.93■□□□□ 0.62
SMAD3-206ENST00000558739 LRP5O75197 1615 aa18.92■□□□□ 0.62
SMAD3-206ENST00000558739 CHGAP10645 457 aaKnown RBP18.9■□□□□ 0.62
SMAD3-206ENST00000558739 TRPC5Q9UL62 973 aaPredicted RBP18.89■□□□□ 0.61
SMAD3-206ENST00000558739 LAMC1P11047 1609 aa18.88■□□□□ 0.61
SMAD3-206ENST00000558739 FOXD1Q16676 465 aa18.87■□□□□ 0.61
SMAD3-206ENST00000558739 ANKRD30AQ9BXX3 1397 aa18.87■□□□□ 0.61
SMAD3-206ENST00000558739 ADGRL3Q9HAR2 1447 aa18.87■□□□□ 0.61
SMAD3-206ENST00000558739 VPS8Q8N3P4 1428 aa18.86■□□□□ 0.61
SMAD3-206ENST00000558739 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.86■□□□□ 0.61
SMAD3-206ENST00000558739 E9PCH4 1651 aa18.85■□□□□ 0.61
SMAD3-206ENST00000558739 HDGFP51858 240 aaKnown RBP18.85■□□□□ 0.61
SMAD3-206ENST00000558739 DEFB132Q7Z7B7 95 aa18.85■□□□□ 0.61
SMAD3-206ENST00000558739 FNBP4Q8N3X1 1017 aaPredicted RBP18.85■□□□□ 0.61
SMAD3-206ENST00000558739 BCL9LQ86UU0 1499 aa18.84■□□□□ 0.61
SMAD3-206ENST00000558739 METP08581 1390 aa18.83■□□□□ 0.61
SMAD3-206ENST00000558739 COL22A1Q8NFW1 1626 aaPredicted RBP18.83■□□□□ 0.61
SMAD3-206ENST00000558739 C1orf167Q5SNV9 1468 aa18.83■□□□□ 0.6
SMAD3-206ENST00000558739 PTCH1Q13635 1447 aa18.83■□□□□ 0.6
SMAD3-206ENST00000558739 BRWD3Q6RI45 1802 aa18.82■□□□□ 0.6
SMAD3-206ENST00000558739 MARF1Q9Y4F3 1742 aaKnown RBP18.81■□□□□ 0.6
SMAD3-206ENST00000558739 CCDC125Q86Z20 511 aa18.81■□□□□ 0.6
SMAD3-206ENST00000558739 BLMP54132 1417 aaPredicted RBP18.81■□□□□ 0.6
SMAD3-206ENST00000558739 GLI3P10071 1580 aa18.81■□□□□ 0.6
SMAD3-206ENST00000558739 MYOM2P54296 1465 aa18.8■□□□□ 0.6
SMAD3-206ENST00000558739 SOS2Q07890 1332 aaPredicted RBP18.79■□□□□ 0.6
SMAD3-206ENST00000558739 ADGRL2O95490 1459 aa18.79■□□□□ 0.6
SMAD3-206ENST00000558739 ORAI2Q96SN7 254 aa18.78■□□□□ 0.6
SMAD3-206ENST00000558739 ANKRD50Q9ULJ7 1429 aa18.77■□□□□ 0.6
SMAD3-206ENST00000558739 PSDA5PKW4 1024 aaPredicted RBP18.77■□□□□ 0.6
SMAD3-206ENST00000558739 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.74■□□□□ 0.59
SMAD3-206ENST00000558739 RALGAPBQ86X10 1494 aa18.74■□□□□ 0.59
SMAD3-206ENST00000558739 GJD4Q96KN9 370 aaPredicted RBP18.74■□□□□ 0.59
SMAD3-206ENST00000558739 IQGAP3Q86VI3 1631 aa18.74■□□□□ 0.59
SMAD3-206ENST00000558739 SPHKAPQ2M3C7 1700 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms