RNA–Protein interactions for RNA: ENST00000558660.1

MRPL46-203, Transcript of mitochondrial ribosomal protein L46, humanhuman

TSL 2

Gene MRPL46, Length 5,561 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL46-203ENST00000558660 STAG3Q9UJ98 1225 aa11.2□□□□□ -0.62
MRPL46-203ENST00000558660 KIF16BQ96L93 1317 aa11.2□□□□□ -0.62
MRPL46-203ENST00000558660 E9PSI1 815 aa11.19□□□□□ -0.62
MRPL46-203ENST00000558660 TRAK2O60296 914 aa11.19□□□□□ -0.62
MRPL46-203ENST00000558660 R3HCC1Q9Y3T6 440 aaKnown RBP11.19□□□□□ -0.62
MRPL46-203ENST00000558660 CCDC141Q6ZP82 1450 aa11.19□□□□□ -0.62
MRPL46-203ENST00000558660 SPAG9O60271 1321 aaKnown RBP11.19□□□□□ -0.62
MRPL46-203ENST00000558660 ABCA5Q8WWZ7 1642 aa11.19□□□□□ -0.62
MRPL46-203ENST00000558660 ESF1Q9H501 851 aaKnown RBP11.19□□□□□ -0.62
MRPL46-203ENST00000558660 FOXD4L1Q9NU39 408 aa11.19□□□□□ -0.62
MRPL46-203ENST00000558660 SHANK2Q9UPX8 1470 aa11.19□□□□□ -0.62
MRPL46-203ENST00000558660 GOLGA6L4A6NEF3 574 aa11.18□□□□□ -0.62
MRPL46-203ENST00000558660 NASPP49321 788 aaPredicted RBP11.18□□□□□ -0.62
MRPL46-203ENST00000558660 HNRNPMP52272 730 aaKnown RBP eCLIP11.18□□□□□ -0.62
MRPL46-203ENST00000558660 RAPGEF6Q8TEU7 1601 aa11.18□□□□□ -0.62
MRPL46-203ENST00000558660 GRIN2AQ12879 1464 aa11.18□□□□□ -0.62
MRPL46-203ENST00000558660 ARHGEF12Q9NZN5 1544 aa11.18□□□□□ -0.62
MRPL46-203ENST00000558660 MORC1Q86VD1 984 aa11.17□□□□□ -0.62
MRPL46-203ENST00000558660 ADAMTS12P58397 1594 aa11.17□□□□□ -0.62
MRPL46-203ENST00000558660 ST18O60284 1047 aa11.17□□□□□ -0.62
MRPL46-203ENST00000558660 INSRP06213 1382 aa11.17□□□□□ -0.62
MRPL46-203ENST00000558660 WDR62O43379 1518 aa11.17□□□□□ -0.62
MRPL46-203ENST00000558660 GRPEL1Q9HAV7 217 aa11.17□□□□□ -0.62
MRPL46-203ENST00000558660 CDK13Q14004 1512 aaKnown RBP11.16□□□□□ -0.62
MRPL46-203ENST00000558660 DNMT1P26358 1616 aaKnown RBP11.15□□□□□ -0.62
MRPL46-203ENST00000558660 RALGAPBQ86X10 1494 aa11.15□□□□□ -0.62
MRPL46-203ENST00000558660 HDGFP51858 240 aaKnown RBP11.15□□□□□ -0.63
MRPL46-203ENST00000558660 CCDC146Q8IYE0 955 aa11.14□□□□□ -0.63
MRPL46-203ENST00000558660 ZMYND15Q9H091 742 aa11.14□□□□□ -0.63
MRPL46-203ENST00000558660 NUP160Q12769 1436 aa11.14□□□□□ -0.63
MRPL46-203ENST00000558660 PANK3Q9H999 370 aa11.14□□□□□ -0.63
MRPL46-203ENST00000558660 PNISRQ8TF01 805 aaKnown RBP11.14□□□□□ -0.63
MRPL46-203ENST00000558660 C22orf23Q9BZE7 217 aa11.14□□□□□ -0.63
MRPL46-203ENST00000558660 PDCL3Q9H2J4 239 aa11.14□□□□□ -0.63
MRPL46-203ENST00000558660 ARHGAP5Q13017 1502 aa11.13□□□□□ -0.63
MRPL46-203ENST00000558660 ADGRL2O95490 1459 aa11.13□□□□□ -0.63
MRPL46-203ENST00000558660 TAF3Q5VWG9 929 aa11.13□□□□□ -0.63
MRPL46-203ENST00000558660 SMC4Q9NTJ3 1288 aa11.13□□□□□ -0.63
MRPL46-203ENST00000558660 ESPNB1AK53 854 aa11.12□□□□□ -0.63
MRPL46-203ENST00000558660 RBM10P98175 930 aaKnown RBP11.12□□□□□ -0.63
MRPL46-203ENST00000558660 NBPF8Q3BBV2 869 aa11.12□□□□□ -0.63
MRPL46-203ENST00000558660 KIAA1211Q6ZU35 1233 aa11.12□□□□□ -0.63
MRPL46-203ENST00000558660 KIAA0556O60303 1618 aa11.12□□□□□ -0.63
MRPL46-203ENST00000558660 PRG4Q92954 1404 aaPredicted RBP11.12□□□□□ -0.63
MRPL46-203ENST00000558660 EIF2AK4Q9P2K8 1649 aaKnown RBP11.12□□□□□ -0.63
MRPL46-203ENST00000558660 HTATSF1O43719 755 aaKnown RBP11.11□□□□□ -0.63
MRPL46-203ENST00000558660 NUCB2P80303 420 aa11.11□□□□□ -0.63
MRPL46-203ENST00000558660 UQCRHLA0A096LP55 91 aa11.11□□□□□ -0.63
MRPL46-203ENST00000558660 UQCRHP07919 91 aa11.11□□□□□ -0.63
MRPL46-203ENST00000558660 CCDC66A2RUB6 948 aa11.11□□□□□ -0.63
MRPL46-203ENST00000558660 PTPRKQ15262 1439 aa11.11□□□□□ -0.63
MRPL46-203ENST00000558660 U2SURPO15042 1029 aaKnown RBP11.11□□□□□ -0.63
MRPL46-203ENST00000558660 ZNF644Q9H582 1327 aaPredicted RBP11.1□□□□□ -0.63
MRPL46-203ENST00000558660 CLUAP1Q96AJ1 413 aa11.1□□□□□ -0.63
MRPL46-203ENST00000558660 HDGFL2Q7Z4V5 671 aaPredicted RBP11.1□□□□□ -0.63
MRPL46-203ENST00000558660 DIAPH3Q9NSV4 1193 aa11.1□□□□□ -0.63
MRPL46-203ENST00000558660 UHRF1BP1Q6BDS2 1440 aa11.1□□□□□ -0.63
MRPL46-203ENST00000558660 ERBINQ96RT1 1412 aa11.1□□□□□ -0.63
MRPL46-203ENST00000558660 COG6Q9Y2V7 657 aa11.1□□□□□ -0.63
MRPL46-203ENST00000558660 CHMP4AQ9BY43 222 aa11.09□□□□□ -0.63
MRPL46-203ENST00000558660 TPM3P06753 285 aa11.09□□□□□ -0.63
MRPL46-203ENST00000558660 TPM4P67936 248 aa11.09□□□□□ -0.63
MRPL46-203ENST00000558660 HMGN5P82970 282 aaKnown RBP11.09□□□□□ -0.63
MRPL46-203ENST00000558660 ZKSCAN2Q63HK3 967 aa11.09□□□□□ -0.63
MRPL46-203ENST00000558660 TEX35Q5T0J7 233 aa11.09□□□□□ -0.63
MRPL46-203ENST00000558660 TERF2IPQ9NYB0 399 aa11.09□□□□□ -0.63
MRPL46-203ENST00000558660 ARHGEF11O15085 1522 aa11.08□□□□□ -0.64
MRPL46-203ENST00000558660 PBRM1Q86U86 1689 aa11.08□□□□□ -0.64
MRPL46-203ENST00000558660 MCTP1Q6DN14 999 aa11.08□□□□□ -0.64
MRPL46-203ENST00000558660 ADGBQ8N7X0 1667 aa11.08□□□□□ -0.64
MRPL46-203ENST00000558660 GPATCH8Q9UKJ3 1502 aaKnown RBP11.08□□□□□ -0.64
MRPL46-203ENST00000558660 POGKQ9P215 609 aa11.08□□□□□ -0.64
MRPL46-203ENST00000558660 CT47B1P0C2W7 299 aaPredicted RBP11.08□□□□□ -0.64
MRPL46-203ENST00000558660 TEX14Q8IWB6 1497 aa11.07□□□□□ -0.64
MRPL46-203ENST00000558660 LMOD3Q0VAK6 560 aa11.07□□□□□ -0.64
MRPL46-203ENST00000558660 MCM4P33991 863 aa11.07□□□□□ -0.64
MRPL46-203ENST00000558660 GOLGA6L1Q8N7Z2 621 aa11.07□□□□□ -0.64
MRPL46-203ENST00000558660 CCDC184Q52MB2 194 aa11.06□□□□□ -0.64
MRPL46-203ENST00000558660 CLCN1P35523 988 aa11.06□□□□□ -0.64
MRPL46-203ENST00000558660 ZSCAN30Q86W11 494 aa11.06□□□□□ -0.64
MRPL46-203ENST00000558660 DDX19BQ9UMR2 479 aa11.06□□□□□ -0.64
MRPL46-203ENST00000558660 SETQ01105 290 aaPredicted RBP11.06□□□□□ -0.64
MRPL46-203ENST00000558660 EVC2Q86UK5 1308 aa11.05□□□□□ -0.64
MRPL46-203ENST00000558660 PDE3AQ14432 1141 aa11.05□□□□□ -0.64
MRPL46-203ENST00000558660 NUP153P49790 1475 aaKnown RBP11.05□□□□□ -0.64
MRPL46-203ENST00000558660 VGFO15240 615 aaPredicted RBP11.05□□□□□ -0.64
MRPL46-203ENST00000558660 RPGRIP1LQ68CZ1 1315 aa11.05□□□□□ -0.64
MRPL46-203ENST00000558660 KCNJ4P48050 445 aa11.04□□□□□ -0.64
MRPL46-203ENST00000558660 CIZ1Q9ULV3 898 aaPredicted RBP11.04□□□□□ -0.64
MRPL46-203ENST00000558660 ATP6V1DQ9Y5K8 247 aa11.04□□□□□ -0.64
MRPL46-203ENST00000558660 KIF3BO15066 747 aa11.04□□□□□ -0.64
MRPL46-203ENST00000558660 LETM1O95202 739 aaPredicted RBP11.03□□□□□ -0.64
MRPL46-203ENST00000558660 RUNDC1Q96C34 613 aa11.03□□□□□ -0.64
MRPL46-203ENST00000558660 TSPY26PQ9H489 355 aa11.03□□□□□ -0.64
MRPL46-203ENST00000558660 NOM1Q5C9Z4 860 aaKnown RBP11.03□□□□□ -0.64
MRPL46-203ENST00000558660 CDCA7LQ96GN5 454 aa11.03□□□□□ -0.64
MRPL46-203ENST00000558660 U2AF1L5P0DN76 240 aaPredicted RBP11.03□□□□□ -0.64
MRPL46-203ENST00000558660 U2AF1Q01081 240 aaKnown RBP eCLIP11.03□□□□□ -0.64
MRPL46-203ENST00000558660 FOXD4L5Q5VV16 416 aaPredicted RBP11.03□□□□□ -0.64
MRPL46-203ENST00000558660 FOXD4L4Q8WXT5 416 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms