RNA–Protein interactions for RNA: ENST00000558651.5

HMG20A-205, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 494 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-205ENST00000558651 PCDHB3Q9Y5E6 796 aa7.35□□□□□ -1.23
HMG20A-205ENST00000558651 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.34□□□□□ -1.23
HMG20A-205ENST00000558651 TESPA1A2RU30 521 aaPredicted RBP7.34□□□□□ -1.23
HMG20A-205ENST00000558651 TMEM134Q9H6X4 195 aa7.34□□□□□ -1.23
HMG20A-205ENST00000558651 RBM26Q5T8P6 1007 aaKnown RBP7.33□□□□□ -1.24
HMG20A-205ENST00000558651 FAM161AQ3B820 660 aa7.32□□□□□ -1.24
HMG20A-205ENST00000558651 PPP1R18Q6NYC8 613 aa7.32□□□□□ -1.24
HMG20A-205ENST00000558651 ZNF516Q92618 1163 aa7.32□□□□□ -1.24
HMG20A-205ENST00000558651 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.32□□□□□ -1.24
HMG20A-205ENST00000558651 GNPATO15228 680 aa7.31□□□□□ -1.24
HMG20A-205ENST00000558651 CFHP08603 1231 aa7.31□□□□□ -1.24
HMG20A-205ENST00000558651 LAPTM4AQ15012 233 aa7.31□□□□□ -1.24
HMG20A-205ENST00000558651 ZPR1O75312 459 aa7.3□□□□□ -1.24
HMG20A-205ENST00000558651 Q6ZNB5 142 aa7.3□□□□□ -1.24
HMG20A-205ENST00000558651 PRKD2Q9BZL6 878 aa7.3□□□□□ -1.24
HMG20A-205ENST00000558651 GPIHBP1Q8IV16 184 aa7.29□□□□□ -1.24
HMG20A-205ENST00000558651 ACTN4O43707 911 aaKnown RBP7.28□□□□□ -1.24
HMG20A-205ENST00000558651 BLOC1S3Q6QNY0 202 aa7.28□□□□□ -1.24
HMG20A-205ENST00000558651 VSIG10Q8N0Z9 540 aa7.28□□□□□ -1.24
HMG20A-205ENST00000558651 PXYLP1Q8TE99 480 aa7.28□□□□□ -1.24
HMG20A-205ENST00000558651 TMUB1Q9BVT8 246 aa7.28□□□□□ -1.24
HMG20A-205ENST00000558651 NR1I2O75469 434 aa7.27□□□□□ -1.25
HMG20A-205ENST00000558651 METTL3Q86U44 580 aaKnown RBP7.27□□□□□ -1.25
HMG20A-205ENST00000558651 RDH13Q8NBN7 331 aa7.27□□□□□ -1.25
HMG20A-205ENST00000558651 NKX2-3Q8TAU0 364 aa7.27□□□□□ -1.25
HMG20A-205ENST00000558651 V9GY48 417 aaPredicted RBP7.27□□□□□ -1.25
HMG20A-205ENST00000558651 GFRA3O60609 400 aa7.26□□□□□ -1.25
HMG20A-205ENST00000558651 SULF1Q8IWU6 871 aa7.25□□□□□ -1.25
HMG20A-205ENST00000558651 DAXXQ9UER7 740 aaPredicted RBP7.24□□□□□ -1.25
HMG20A-205ENST00000558651 KDM2AQ9Y2K7 1162 aa7.24□□□□□ -1.25
HMG20A-205ENST00000558651 DDX11L8A8MPP1 907 aa7.23□□□□□ -1.25
HMG20A-205ENST00000558651 SLC10A3P09131 477 aa7.23□□□□□ -1.25
HMG20A-205ENST00000558651 TLL1O43897 1013 aa7.21□□□□□ -1.26
HMG20A-205ENST00000558651 ADH1BP00325 375 aa7.21□□□□□ -1.26
HMG20A-205ENST00000558651 FECHP22830 423 aa7.21□□□□□ -1.26
HMG20A-205ENST00000558651 NRG2O14511 850 aaPredicted RBP7.2□□□□□ -1.26
HMG20A-205ENST00000558651 SLC19A1P41440 591 aa7.2□□□□□ -1.26
HMG20A-205ENST00000558651 GRIPAP1Q4V328 841 aa7.2□□□□□ -1.26
HMG20A-205ENST00000558651 SLC6A16Q9GZN6 736 aa7.2□□□□□ -1.26
HMG20A-205ENST00000558651 PDZRN3Q9UPQ7 1066 aa7.2□□□□□ -1.26
HMG20A-205ENST00000558651 RNF223E7ERA6 249 aa7.19□□□□□ -1.26
HMG20A-205ENST00000558651 S1PR4O95977 384 aa7.19□□□□□ -1.26
HMG20A-205ENST00000558651 GPR37O15354 613 aa7.18□□□□□ -1.26
HMG20A-205ENST00000558651 PUS10Q3MIT2 529 aaKnown RBP7.18□□□□□ -1.26
HMG20A-205ENST00000558651 SCUBE3Q8IX30 993 aa7.18□□□□□ -1.26
HMG20A-205ENST00000558651 ANKLE1Q8NAG6 615 aa7.18□□□□□ -1.26
HMG20A-205ENST00000558651 ATP6V1AP38606 617 aa7.17□□□□□ -1.26
HMG20A-205ENST00000558651 MAP2K5Q13163 448 aa7.17□□□□□ -1.26
HMG20A-205ENST00000558651 SPSB2Q99619 263 aa7.17□□□□□ -1.26
HMG20A-205ENST00000558651 TRAF7Q6Q0C0 670 aa7.16□□□□□ -1.26
HMG20A-205ENST00000558651 KRI1Q8N9T8 703 aaKnown RBP7.16□□□□□ -1.26
HMG20A-205ENST00000558651 NLRP7Q8WX94 980 aa7.16□□□□□ -1.26
HMG20A-205ENST00000558651 PPEF1O14829 653 aaPredicted RBP7.15□□□□□ -1.26
HMG20A-205ENST00000558651 FMNL1O95466 1100 aaPredicted RBP7.15□□□□□ -1.26
HMG20A-205ENST00000558651 GCGRP47871 477 aa7.15□□□□□ -1.26
HMG20A-205ENST00000558651 FUT2Q10981 343 aa7.15□□□□□ -1.26
HMG20A-205ENST00000558651 MINK1Q8N4C8 1332 aaPredicted RBP7.13□□□□□ -1.27
HMG20A-205ENST00000558651 MORN1Q5T089 497 aa7.13□□□□□ -1.27
HMG20A-205ENST00000558651 IRF6O14896 467 aa7.12□□□□□ -1.27
HMG20A-205ENST00000558651 Q3C1V9 767 aa7.12□□□□□ -1.27
HMG20A-205ENST00000558651 ZNF697Q5TEC3 545 aa7.12□□□□□ -1.27
HMG20A-205ENST00000558651 SPRYD7Q5W111 196 aa7.12□□□□□ -1.27
HMG20A-205ENST00000558651 ZNF598Q86UK7 904 aaKnown RBP7.12□□□□□ -1.27
HMG20A-205ENST00000558651 PHOX2BQ99453 314 aa7.12□□□□□ -1.27
HMG20A-205ENST00000558651 PKDCCQ504Y2 493 aa7.11□□□□□ -1.27
HMG20A-205ENST00000558651 SLC27A5Q9Y2P5 690 aa7.11□□□□□ -1.27
HMG20A-205ENST00000558651 ZBTB24O43167 697 aaPredicted RBP7.1□□□□□ -1.27
HMG20A-205ENST00000558651 MDM2Q00987 491 aaPredicted RBP7.1□□□□□ -1.27
HMG20A-205ENST00000558651 CD2BP2O95400 341 aaKnown RBP7.09□□□□□ -1.27
HMG20A-205ENST00000558651 CLCN1P35523 988 aa7.09□□□□□ -1.27
HMG20A-205ENST00000558651 LIAT1Q6ZQX7 453 aa7.09□□□□□ -1.27
HMG20A-205ENST00000558651 SALL2Q9Y467 1007 aaPredicted RBP7.09□□□□□ -1.27
HMG20A-205ENST00000558651 KDM4AO75164 1064 aa7.08□□□□□ -1.28
HMG20A-205ENST00000558651 USP46P62068 366 aa7.08□□□□□ -1.28
HMG20A-205ENST00000558651 CCDC102AQ96A19 550 aa7.08□□□□□ -1.28
HMG20A-205ENST00000558651 FCF1Q9Y324 198 aaKnown RBP7.08□□□□□ -1.28
HMG20A-205ENST00000558651 CD46P15529 392 aa7.07□□□□□ -1.28
HMG20A-205ENST00000558651 RPIAP49247 311 aa7.07□□□□□ -1.28
HMG20A-205ENST00000558651 NUTM1Q86Y26 1132 aa7.07□□□□□ -1.28
HMG20A-205ENST00000558651 GPCPD1Q9NPB8 672 aa7.07□□□□□ -1.28
HMG20A-205ENST00000558651 TNFRSF10AO00220 468 aa7.06□□□□□ -1.28
HMG20A-205ENST00000558651 DGAT1O75907 488 aa7.06□□□□□ -1.28
HMG20A-205ENST00000558651 PRR20EP86478 221 aa7.06□□□□□ -1.28
HMG20A-205ENST00000558651 PRR20CP86479 221 aa7.06□□□□□ -1.28
HMG20A-205ENST00000558651 PRR20DP86480 221 aa7.06□□□□□ -1.28
HMG20A-205ENST00000558651 PRR20BP86481 221 aa7.06□□□□□ -1.28
HMG20A-205ENST00000558651 PRR20AP86496 221 aa7.06□□□□□ -1.28
HMG20A-205ENST00000558651 FOXC1Q12948 553 aa7.06□□□□□ -1.28
HMG20A-205ENST00000558651 LMOD2Q6P5Q4 547 aa7.06□□□□□ -1.28
HMG20A-205ENST00000558651 BRICD5Q6PL45 260 aa7.06□□□□□ -1.28
HMG20A-205ENST00000558651 THAP11Q96EK4 314 aa7.06□□□□□ -1.28
HMG20A-205ENST00000558651 FAM187AA6NFU0 413 aa7.05□□□□□ -1.28
HMG20A-205ENST00000558651 MSS51Q4VC12 460 aa7.05□□□□□ -1.28
HMG20A-205ENST00000558651 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.05□□□□□ -1.28
HMG20A-205ENST00000558651 ZNF787Q6DD87 383 aa7.04□□□□□ -1.28
HMG20A-205ENST00000558651 FAM160A2Q8N612 972 aaPredicted RBP7.04□□□□□ -1.28
HMG20A-205ENST00000558651 PLA2G2CQ5R387 149 aa7.03□□□□□ -1.28
HMG20A-205ENST00000558651 RNF19BQ6ZMZ0 732 aa7.03□□□□□ -1.28
HMG20A-205ENST00000558651 EMID1Q96A84 441 aaPredicted RBP7.03□□□□□ -1.28
HMG20A-205ENST00000558651 USB1Q9BQ65 265 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms