RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 ANKRD50Q9ULJ7 1429 aa23.45■■□□□ 1.34
LINC01220-201ENST00000558575 KCNA6P17658 529 aa23.45■■□□□ 1.34
LINC01220-201ENST00000558575 CHD2O14647 1828 aaKnown RBP23.45■■□□□ 1.34
LINC01220-201ENST00000558575 ARHGAP31Q2M1Z3 1444 aa23.44■■□□□ 1.34
LINC01220-201ENST00000558575 EFCAB6Q5THR3 1501 aa23.43■■□□□ 1.34
LINC01220-201ENST00000558575 PROSER2Q86WR7 435 aaPredicted RBP23.43■■□□□ 1.34
LINC01220-201ENST00000558575 TRIM52Q96A61 297 aa23.42■■□□□ 1.34
LINC01220-201ENST00000558575 SLC26A8Q96RN1 970 aa23.4■■□□□ 1.34
LINC01220-201ENST00000558575 MYO5BQ9ULV0 1848 aa23.4■■□□□ 1.34
LINC01220-201ENST00000558575 NAIPQ13075 1403 aa23.39■■□□□ 1.33
LINC01220-201ENST00000558575 MSH6P52701 1360 aa23.39■■□□□ 1.33
LINC01220-201ENST00000558575 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.38■■□□□ 1.33
LINC01220-201ENST00000558575 SLAIN2Q9P270 581 aa23.37■■□□□ 1.33
LINC01220-201ENST00000558575 AHDC1Q5TGY3 1603 aaPredicted RBP23.35■■□□□ 1.33
LINC01220-201ENST00000558575 HFM1A2PYH4 1435 aa23.34■■□□□ 1.33
LINC01220-201ENST00000558575 SRCAPQ6ZRS2 3230 aa23.34■■□□□ 1.33
LINC01220-201ENST00000558575 ZNF772Q68DY9 489 aaPredicted RBP23.34■■□□□ 1.33
LINC01220-201ENST00000558575 SPATA31A6Q5VVP1 1343 aa23.33■■□□□ 1.33
LINC01220-201ENST00000558575 ADGRB3O60242 1522 aa23.33■■□□□ 1.33
LINC01220-201ENST00000558575 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.33■■□□□ 1.32
LINC01220-201ENST00000558575 DIP2AQ14689 1571 aa23.31■■□□□ 1.32
LINC01220-201ENST00000558575 CDK12Q9NYV4 1490 aaPredicted RBP23.31■■□□□ 1.32
LINC01220-201ENST00000558575 MEX3CQ5U5Q3 659 aaKnown RBP23.3■■□□□ 1.32
LINC01220-201ENST00000558575 STAG3Q9UJ98 1225 aa23.3■■□□□ 1.32
LINC01220-201ENST00000558575 IDI1Q13907 227 aa23.28■■□□□ 1.32
LINC01220-201ENST00000558575 RXRBP28702 533 aa23.27■■□□□ 1.32
LINC01220-201ENST00000558575 KANK1Q14678 1352 aa23.27■■□□□ 1.31
LINC01220-201ENST00000558575 GCC2Q8IWJ2 1684 aa23.26■■□□□ 1.31
LINC01220-201ENST00000558575 LMTK2Q8IWU2 1503 aa23.25■■□□□ 1.31
LINC01220-201ENST00000558575 NUP155O75694 1391 aa23.25■■□□□ 1.31
LINC01220-201ENST00000558575 UNC13BO14795 1591 aa23.23■■□□□ 1.31
LINC01220-201ENST00000558575 RGS12O14924 1447 aa23.22■■□□□ 1.31
LINC01220-201ENST00000558575 NOS1P29475 1434 aa23.22■■□□□ 1.31
LINC01220-201ENST00000558575 SETD5Q9C0A6 1442 aa23.21■■□□□ 1.31
LINC01220-201ENST00000558575 ZFYVE9O95405 1425 aa23.2■■□□□ 1.3
LINC01220-201ENST00000558575 NHSL1Q5SYE7 1610 aa23.18■■□□□ 1.3
LINC01220-201ENST00000558575 BCANQ96GW7 911 aa23.17■■□□□ 1.3
LINC01220-201ENST00000558575 NCOA3Q9Y6Q9 1424 aa23.16■■□□□ 1.3
LINC01220-201ENST00000558575 PLEKHG1Q9ULL1 1385 aa23.16■■□□□ 1.3
LINC01220-201ENST00000558575 AFF2P51816 1311 aa23.16■■□□□ 1.3
LINC01220-201ENST00000558575 TRIM26Q12899 539 aaPredicted RBP23.16■■□□□ 1.3
LINC01220-201ENST00000558575 TMEM131LA2VDJ0 1609 aa23.15■■□□□ 1.3
LINC01220-201ENST00000558575 NUTM2BA6NNL0 878 aaPredicted RBP23.15■■□□□ 1.3
LINC01220-201ENST00000558575 NUTM2EB1AL46 878 aaPredicted RBP23.15■■□□□ 1.3
LINC01220-201ENST00000558575 NUTM2AQ8IVF1 878 aaPredicted RBP23.15■■□□□ 1.3
LINC01220-201ENST00000558575 RAB3GAP2Q9H2M9 1393 aa23.14■■□□□ 1.3
LINC01220-201ENST00000558575 IQGAP3Q86VI3 1631 aa23.13■■□□□ 1.29
LINC01220-201ENST00000558575 RIMS2Q9UQ26 1411 aa23.11■■□□□ 1.29
LINC01220-201ENST00000558575 ASXL1Q8IXJ9 1541 aa23.1■■□□□ 1.29
LINC01220-201ENST00000558575 SETBP1Q9Y6X0 1596 aa23.1■■□□□ 1.29
LINC01220-201ENST00000558575 HRCP23327 699 aa23.09■■□□□ 1.29
LINC01220-201ENST00000558575 BRINP3Q76B58 766 aa23.09■■□□□ 1.29
LINC01220-201ENST00000558575 C14orf37Q86TY3 774 aa23.09■■□□□ 1.29
LINC01220-201ENST00000558575 CADPS2Q86UW7 1296 aa23.09■■□□□ 1.29
LINC01220-201ENST00000558575 ADAMTS13Q76LX8 1427 aa23.08■■□□□ 1.29
LINC01220-201ENST00000558575 SLC4A1APQ9BWU0 796 aaKnown RBP23.07■■□□□ 1.28
LINC01220-201ENST00000558575 MPHOSPH9Q99550 1183 aa23.06■■□□□ 1.28
LINC01220-201ENST00000558575 C19orf44Q9H6X5 657 aa23.06■■□□□ 1.28
LINC01220-201ENST00000558575 RPRD2Q5VT52 1461 aaKnown RBP23.05■■□□□ 1.28
LINC01220-201ENST00000558575 ATF3P18847 181 aa23.05■■□□□ 1.28
LINC01220-201ENST00000558575 SLC52A1Q9NWF4 448 aa23.05■■□□□ 1.28
LINC01220-201ENST00000558575 TBX22Q9Y458 520 aa23.05■■□□□ 1.28
LINC01220-201ENST00000558575 RBM6P78332 1123 aaKnown RBP23.04■■□□□ 1.28
LINC01220-201ENST00000558575 E9PCH4 1651 aa23.03■■□□□ 1.28
LINC01220-201ENST00000558575 PPP1R15AO75807 674 aaPredicted RBP23.03■■□□□ 1.28
LINC01220-201ENST00000558575 NUTM2DQ5VT03 806 aaPredicted RBP23.03■■□□□ 1.28
LINC01220-201ENST00000558575 QTRT2Q9H974 415 aaKnown RBP23.03■■□□□ 1.28
LINC01220-201ENST00000558575 XRN1Q8IZH2 1706 aaKnown RBP23.02■■□□□ 1.28
LINC01220-201ENST00000558575 ACIN1Q9UKV3 1341 aaKnown RBP23.02■■□□□ 1.28
LINC01220-201ENST00000558575 FOXD1Q16676 465 aa23.01■■□□□ 1.27
LINC01220-201ENST00000558575 C8orf37Q96NL8 207 aa23.01■■□□□ 1.27
LINC01220-201ENST00000558575 PTPRUQ92729 1446 aa23■■□□□ 1.27
LINC01220-201ENST00000558575 EP400Q96L91 3159 aa23■■□□□ 1.27
LINC01220-201ENST00000558575 TRPM2O94759 1503 aa23■■□□□ 1.27
LINC01220-201ENST00000558575 ATAD2Q6PL18 1390 aa22.99■■□□□ 1.27
LINC01220-201ENST00000558575 PIK3R4Q99570 1358 aa22.99■■□□□ 1.27
LINC01220-201ENST00000558575 DCCP43146 1447 aa22.99■■□□□ 1.27
LINC01220-201ENST00000558575 MST1RQ04912 1400 aa22.99■■□□□ 1.27
LINC01220-201ENST00000558575 PNPLA6Q8IY17 1366 aa22.98■■□□□ 1.27
LINC01220-201ENST00000558575 NRXN3Q9Y4C0 1643 aa22.97■■□□□ 1.27
LINC01220-201ENST00000558575 NALCNQ8IZF0 1738 aa22.96■■□□□ 1.27
LINC01220-201ENST00000558575 ZRANB1Q9UGI0 708 aa22.94■■□□□ 1.26
LINC01220-201ENST00000558575 DDX17Q92841 729 aaKnown RBP22.93■■□□□ 1.26
LINC01220-201ENST00000558575 LAMC1P11047 1609 aa22.93■■□□□ 1.26
LINC01220-201ENST00000558575 HDGFP51858 240 aaKnown RBP22.92■■□□□ 1.26
LINC01220-201ENST00000558575 LRRC59Q96AG4 307 aaKnown RBP22.91■■□□□ 1.26
LINC01220-201ENST00000558575 AMOTL2Q9Y2J4 779 aa22.91■■□□□ 1.26
LINC01220-201ENST00000558575 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.9■■□□□ 1.26
LINC01220-201ENST00000558575 MARF1Q9Y4F3 1742 aaKnown RBP22.89■■□□□ 1.26
LINC01220-201ENST00000558575 PCGF6Q9BYE7 350 aa22.89■■□□□ 1.25
LINC01220-201ENST00000558575 NGLY1Q96IV0 654 aa22.88■■□□□ 1.25
LINC01220-201ENST00000558575 ADAMTS2O95450 1211 aa22.87■■□□□ 1.25
LINC01220-201ENST00000558575 CHGAP10645 457 aaKnown RBP22.86■■□□□ 1.25
LINC01220-201ENST00000558575 ATRNO75882 1429 aa22.84■■□□□ 1.25
LINC01220-201ENST00000558575 LRP5O75197 1615 aa22.84■■□□□ 1.25
LINC01220-201ENST00000558575 COL22A1Q8NFW1 1626 aaPredicted RBP22.84■■□□□ 1.25
LINC01220-201ENST00000558575 SPHKAPQ2M3C7 1700 aa22.84■■□□□ 1.25
LINC01220-201ENST00000558575 BRWD3Q6RI45 1802 aa22.82■■□□□ 1.24
LINC01220-201ENST00000558575 ANKRD30BQ9BXX2 1392 aa22.82■■□□□ 1.24
LINC01220-201ENST00000558575 ADGRL3Q9HAR2 1447 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms