RNA–Protein interactions for RNA: ENST00000558445.5

TRPM1-207, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-207ENST00000558445 TNPO1Q92973 898 aaKnown RBP12.34□□□□□ -0.43
TRPM1-207ENST00000558445 SLC26A8Q96RN1 970 aa12.34□□□□□ -0.43
TRPM1-207ENST00000558445 MYBBP1AQ9BQG0 1328 aaKnown RBP12.34□□□□□ -0.43
TRPM1-207ENST00000558445 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.34□□□□□ -0.43
TRPM1-207ENST00000558445 SSR1P43307 286 aaKnown RBP12.34□□□□□ -0.43
TRPM1-207ENST00000558445 KLHL40Q2TBA0 621 aa12.34□□□□□ -0.43
TRPM1-207ENST00000558445 TBC1D32Q96NH3 1257 aa12.34□□□□□ -0.43
TRPM1-207ENST00000558445 PANK3Q9H999 370 aa12.34□□□□□ -0.43
TRPM1-207ENST00000558445 RSPH14Q9UHP6 348 aa12.34□□□□□ -0.43
TRPM1-207ENST00000558445 ATP2B3Q16720 1220 aa12.33□□□□□ -0.44
TRPM1-207ENST00000558445 GAS2L3Q86XJ1 694 aa12.33□□□□□ -0.44
TRPM1-207ENST00000558445 FOXD4L1Q9NU39 408 aa12.33□□□□□ -0.44
TRPM1-207ENST00000558445 ERICH3Q5RHP9 1530 aa12.33□□□□□ -0.44
TRPM1-207ENST00000558445 TPM3P06753 285 aa12.32□□□□□ -0.44
TRPM1-207ENST00000558445 HMGB1P09429 215 aaKnown RBP12.32□□□□□ -0.44
TRPM1-207ENST00000558445 SMC4Q9NTJ3 1288 aa12.32□□□□□ -0.44
TRPM1-207ENST00000558445 CGNL1Q0VF96 1302 aa12.32□□□□□ -0.44
TRPM1-207ENST00000558445 KIF7Q2M1P5 1343 aa12.32□□□□□ -0.44
TRPM1-207ENST00000558445 NLRP13Q86W25 1043 aa12.32□□□□□ -0.44
TRPM1-207ENST00000558445 MNS1Q8NEH6 495 aa12.32□□□□□ -0.44
TRPM1-207ENST00000558445 FBXO3Q9UK99 471 aa12.32□□□□□ -0.44
TRPM1-207ENST00000558445 EIF3AQ14152 1382 aaKnown RBP12.32□□□□□ -0.44
TRPM1-207ENST00000558445 ZBTB9Q96C00 473 aa12.31□□□□□ -0.44
TRPM1-207ENST00000558445 ROCK2O75116 1388 aaKnown RBP12.31□□□□□ -0.44
TRPM1-207ENST00000558445 HSP90AB3PQ58FF7 597 aa12.31□□□□□ -0.44
TRPM1-207ENST00000558445 RWDD1Q9H446 243 aaPredicted RBP12.31□□□□□ -0.44
TRPM1-207ENST00000558445 BCL2L12Q9HB09 334 aa12.31□□□□□ -0.44
TRPM1-207ENST00000558445 RBM28Q9NW13 759 aaKnown RBP12.31□□□□□ -0.44
TRPM1-207ENST00000558445 GOLIM4O00461 696 aa12.31□□□□□ -0.44
TRPM1-207ENST00000558445 MCCP23508 829 aa12.31□□□□□ -0.44
TRPM1-207ENST00000558445 NOLC1Q14978 699 aaKnown RBP eCLIP12.31□□□□□ -0.44
TRPM1-207ENST00000558445 MCTP1Q6DN14 999 aa12.31□□□□□ -0.44
TRPM1-207ENST00000558445 BRD4O60885 1362 aaPredicted RBP12.31□□□□□ -0.44
TRPM1-207ENST00000558445 KIF15Q9NS87 1388 aa12.31□□□□□ -0.44
TRPM1-207ENST00000558445 RNF214Q8ND24 703 aa12.31□□□□□ -0.44
TRPM1-207ENST00000558445 KIF21BO75037 1637 aa12.3□□□□□ -0.44
TRPM1-207ENST00000558445 NUCB2P80303 420 aa12.3□□□□□ -0.44
TRPM1-207ENST00000558445 LOC102724159A0A0B4J2E5 919 aa12.3□□□□□ -0.44
TRPM1-207ENST00000558445 PWP2Q15269 919 aaKnown RBP12.3□□□□□ -0.44
TRPM1-207ENST00000558445 KDM2BQ8NHM5 1336 aa12.29□□□□□ -0.44
TRPM1-207ENST00000558445 TNNT1P13805 278 aa12.29□□□□□ -0.44
TRPM1-207ENST00000558445 TSC1Q92574 1164 aa12.29□□□□□ -0.44
TRPM1-207ENST00000558445 TOMM22Q9NS69 142 aa12.29□□□□□ -0.44
TRPM1-207ENST00000558445 RUSC2Q8N2Y8 1516 aa12.29□□□□□ -0.44
TRPM1-207ENST00000558445 SETQ01105 290 aaPredicted RBP12.29□□□□□ -0.44
TRPM1-207ENST00000558445 CDCA7LQ96GN5 454 aa12.29□□□□□ -0.44
TRPM1-207ENST00000558445 CEP120Q8N960 986 aa12.28□□□□□ -0.44
TRPM1-207ENST00000558445 BRMS1Q9HCU9 246 aa12.28□□□□□ -0.44
TRPM1-207ENST00000558445 PLPPR3Q6T4P5 718 aa12.28□□□□□ -0.44
TRPM1-207ENST00000558445 CCDC91Q7Z6B0 441 aa12.28□□□□□ -0.44
TRPM1-207ENST00000558445 NOL10Q9BSC4 688 aaKnown RBP12.28□□□□□ -0.44
TRPM1-207ENST00000558445 KIF16BQ96L93 1317 aa12.28□□□□□ -0.44
TRPM1-207ENST00000558445 CLSTN1O94985 981 aa12.28□□□□□ -0.44
TRPM1-207ENST00000558445 GTF2F1P35269 517 aaKnown RBP eCLIP12.28□□□□□ -0.44
TRPM1-207ENST00000558445 CHMP4CQ96CF2 233 aa12.28□□□□□ -0.44
TRPM1-207ENST00000558445 TPM4P67936 248 aa12.27□□□□□ -0.44
TRPM1-207ENST00000558445 OS9Q13438 667 aaPredicted RBP12.27□□□□□ -0.44
TRPM1-207ENST00000558445 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.27□□□□□ -0.44
TRPM1-207ENST00000558445 SOX12O15370 315 aa12.27□□□□□ -0.45
TRPM1-207ENST00000558445 NCAPGQ9BPX3 1015 aa12.27□□□□□ -0.45
TRPM1-207ENST00000558445 MMP14P50281 582 aa12.27□□□□□ -0.45
TRPM1-207ENST00000558445 CCDC112Q8NEF3 446 aa12.27□□□□□ -0.45
TRPM1-207ENST00000558445 NCOA2Q15596 1464 aa12.27□□□□□ -0.45
TRPM1-207ENST00000558445 TXLNBQ8N3L3 684 aa12.26□□□□□ -0.45
TRPM1-207ENST00000558445 TSPY26PQ9H489 355 aa12.26□□□□□ -0.45
TRPM1-207ENST00000558445 CEP83Q9Y592 693 aa12.26□□□□□ -0.45
TRPM1-207ENST00000558445 FAM177BA6PVY3 158 aa12.26□□□□□ -0.45
TRPM1-207ENST00000558445 MBD3O95983 291 aa12.26□□□□□ -0.45
TRPM1-207ENST00000558445 MAP3K1Q13233 1512 aa12.26□□□□□ -0.45
TRPM1-207ENST00000558445 GOLGA2Q08379 1002 aa12.26□□□□□ -0.45
TRPM1-207ENST00000558445 DRC7Q8IY82 874 aa12.26□□□□□ -0.45
TRPM1-207ENST00000558445 NGEFQ8N5V2 710 aa12.26□□□□□ -0.45
TRPM1-207ENST00000558445 TMX1Q9H3N1 280 aa12.25□□□□□ -0.45
TRPM1-207ENST00000558445 SRPK2P78362 688 aaKnown RBP12.25□□□□□ -0.45
TRPM1-207ENST00000558445 ICE2Q659A1 982 aa12.25□□□□□ -0.45
TRPM1-207ENST00000558445 ZNF445P59923 1031 aa12.25□□□□□ -0.45
TRPM1-207ENST00000558445 TICAM2Q86XR7 235 aa12.25□□□□□ -0.45
TRPM1-207ENST00000558445 NCOA1Q15788 1441 aa12.24□□□□□ -0.45
TRPM1-207ENST00000558445 C10orf67Q8IYJ2 551 aa12.24□□□□□ -0.45
TRPM1-207ENST00000558445 PIBF1Q8WXW3 757 aa12.24□□□□□ -0.45
TRPM1-207ENST00000558445 AK7Q96M32 723 aa12.24□□□□□ -0.45
TRPM1-207ENST00000558445 CCDC172P0C7W6 258 aa12.24□□□□□ -0.45
TRPM1-207ENST00000558445 ZSCAN23Q3MJ62 389 aa12.24□□□□□ -0.45
TRPM1-207ENST00000558445 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.24□□□□□ -0.45
TRPM1-207ENST00000558445 IBTKQ9P2D0 1353 aaPredicted RBP12.23□□□□□ -0.45
TRPM1-207ENST00000558445 C20orf194Q5TEA3 1177 aa12.23□□□□□ -0.45
TRPM1-207ENST00000558445 TERF2Q15554 542 aa12.23□□□□□ -0.45
TRPM1-207ENST00000558445 L3MBTL2Q969R5 705 aa12.23□□□□□ -0.45
TRPM1-207ENST00000558445 ARGLU1Q9NWB6 273 aaPredicted RBP12.23□□□□□ -0.45
TRPM1-207ENST00000558445 CLUAP1Q96AJ1 413 aa12.23□□□□□ -0.45
TRPM1-207ENST00000558445 A0A1B0GUL7 405 aa12.23□□□□□ -0.45
TRPM1-207ENST00000558445 FAM184AQ8NB25 1140 aa12.23□□□□□ -0.45
TRPM1-207ENST00000558445 SATB1Q01826 763 aa12.22□□□□□ -0.45
TRPM1-207ENST00000558445 USP8P40818 1118 aa12.22□□□□□ -0.45
TRPM1-207ENST00000558445 RAB3GAP1Q15042 981 aa12.22□□□□□ -0.45
TRPM1-207ENST00000558445 TTC31Q49AM3 519 aaPredicted RBP12.22□□□□□ -0.45
TRPM1-207ENST00000558445 SEC24BO95487 1268 aa12.22□□□□□ -0.45
TRPM1-207ENST00000558445 ZNF592Q92610 1267 aa12.22□□□□□ -0.45
TRPM1-207ENST00000558445 LEKR1Q6ZMV7 388 aa12.21□□□□□ -0.45
TRPM1-207ENST00000558445 MPNDQ8N594 471 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms