RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 PLXNC1O60486 1568 aa18.07■□□□□ 0.48
HMGB1P8-201ENST00000558211 TRIM26Q12899 539 aaPredicted RBP18.06■□□□□ 0.48
HMGB1P8-201ENST00000558211 ADGRL2O95490 1459 aa18.06■□□□□ 0.48
HMGB1P8-201ENST00000558211 DHX29Q7Z478 1369 aaKnown RBP18.05■□□□□ 0.48
HMGB1P8-201ENST00000558211 TIE1P35590 1138 aa18.05■□□□□ 0.48
HMGB1P8-201ENST00000558211 SIGLEC1Q9BZZ2 1709 aa18.05■□□□□ 0.48
HMGB1P8-201ENST00000558211 ROCK1Q13464 1354 aa18.04■□□□□ 0.48
HMGB1P8-201ENST00000558211 KIF3BO15066 747 aa18.03■□□□□ 0.48
HMGB1P8-201ENST00000558211 DUOX2Q9NRD8 1548 aa18.03■□□□□ 0.48
HMGB1P8-201ENST00000558211 BMP2KQ9NSY1 1161 aaPredicted RBP18.02■□□□□ 0.48
HMGB1P8-201ENST00000558211 GGT6Q6P531 493 aa18.01■□□□□ 0.47
HMGB1P8-201ENST00000558211 REREQ9P2R6 1566 aa18■□□□□ 0.47
HMGB1P8-201ENST00000558211 HS6ST3Q8IZP7 471 aa18■□□□□ 0.47
HMGB1P8-201ENST00000558211 ANKRD50Q9ULJ7 1429 aa17.98■□□□□ 0.47
HMGB1P8-201ENST00000558211 TTLL13PA6NNM8 815 aa17.98■□□□□ 0.47
HMGB1P8-201ENST00000558211 TMEM106CQ9BVX2 250 aa17.98■□□□□ 0.47
HMGB1P8-201ENST00000558211 ASTLQ6HA08 431 aaPredicted RBP17.97■□□□□ 0.47
HMGB1P8-201ENST00000558211 AGLP35573 1532 aa17.97■□□□□ 0.47
HMGB1P8-201ENST00000558211 NAIPQ13075 1403 aa17.97■□□□□ 0.47
HMGB1P8-201ENST00000558211 ERBINQ96RT1 1412 aa17.97■□□□□ 0.47
HMGB1P8-201ENST00000558211 STK25O00506 426 aa17.95■□□□□ 0.46
HMGB1P8-201ENST00000558211 CHGAP10645 457 aaKnown RBP17.95■□□□□ 0.46
HMGB1P8-201ENST00000558211 BCL11BQ9C0K0 894 aaPredicted RBP17.95■□□□□ 0.46
HMGB1P8-201ENST00000558211 GCC2Q8IWJ2 1684 aa17.94■□□□□ 0.46
HMGB1P8-201ENST00000558211 ATMINO43313 823 aaPredicted RBP17.94■□□□□ 0.46
HMGB1P8-201ENST00000558211 HFM1A2PYH4 1435 aa17.94■□□□□ 0.46
HMGB1P8-201ENST00000558211 BCORL1Q5H9F3 1711 aa17.94■□□□□ 0.46
HMGB1P8-201ENST00000558211 ESF1Q9H501 851 aaKnown RBP17.93■□□□□ 0.46
HMGB1P8-201ENST00000558211 EIF2AK4Q9P2K8 1649 aaKnown RBP17.93■□□□□ 0.46
HMGB1P8-201ENST00000558211 POTEIP0CG38 1075 aa17.92■□□□□ 0.46
HMGB1P8-201ENST00000558211 PCGF6Q9BYE7 350 aa17.92■□□□□ 0.46
HMGB1P8-201ENST00000558211 SETD5Q9C0A6 1442 aa17.91■□□□□ 0.46
HMGB1P8-201ENST00000558211 TRIM52Q96A61 297 aa17.9■□□□□ 0.46
HMGB1P8-201ENST00000558211 DCBLD2Q96PD2 775 aa17.9■□□□□ 0.46
HMGB1P8-201ENST00000558211 STK24Q9Y6E0 443 aa17.9■□□□□ 0.46
HMGB1P8-201ENST00000558211 ATN1P54259 1190 aaPredicted RBP17.89■□□□□ 0.45
HMGB1P8-201ENST00000558211 KDM4FA0A1W2PPD8 638 aa17.88■□□□□ 0.45
HMGB1P8-201ENST00000558211 WASHC2CQ9Y4E1 1318 aa17.88■□□□□ 0.45
HMGB1P8-201ENST00000558211 FER1L4A9Z1Z3 1794 aa17.88■□□□□ 0.45
HMGB1P8-201ENST00000558211 MADDQ8WXG6 1647 aa17.87■□□□□ 0.45
HMGB1P8-201ENST00000558211 RNF17Q9BXT8 1623 aaKnown RBP17.87■□□□□ 0.45
HMGB1P8-201ENST00000558211 KANK1Q14678 1352 aa17.87■□□□□ 0.45
HMGB1P8-201ENST00000558211 ADAMTSL3P82987 1691 aa17.87■□□□□ 0.45
HMGB1P8-201ENST00000558211 RAB3GAP2Q9H2M9 1393 aa17.86■□□□□ 0.45
HMGB1P8-201ENST00000558211 RIMS1Q86UR5 1692 aaKnown RBP17.86■□□□□ 0.45
HMGB1P8-201ENST00000558211 NUP155O75694 1391 aa17.85■□□□□ 0.45
HMGB1P8-201ENST00000558211 CLTCQ00610 1675 aaKnown RBP17.85■□□□□ 0.45
HMGB1P8-201ENST00000558211 MROH1Q8NDA8 1641 aa17.85■□□□□ 0.45
HMGB1P8-201ENST00000558211 DEPDC5O75140 1603 aa17.84■□□□□ 0.45
HMGB1P8-201ENST00000558211 CABP2Q9NPB3 220 aa17.84■□□□□ 0.45
HMGB1P8-201ENST00000558211 TRIM35Q9UPQ4 493 aa17.84■□□□□ 0.45
HMGB1P8-201ENST00000558211 CEP152O94986 1710 aa17.84■□□□□ 0.45
HMGB1P8-201ENST00000558211 UNC13BO14795 1591 aa17.83■□□□□ 0.44
HMGB1P8-201ENST00000558211 CEBPAP49715 358 aaPredicted RBP17.82■□□□□ 0.44
HMGB1P8-201ENST00000558211 PELP1Q8IZL8 1130 aaKnown RBP17.82■□□□□ 0.44
HMGB1P8-201ENST00000558211 PRDM15P57071 1507 aaPredicted RBP17.82■□□□□ 0.44
HMGB1P8-201ENST00000558211 KDM5DQ9BY66 1539 aa17.81■□□□□ 0.44
HMGB1P8-201ENST00000558211 CFAP65Q6ZU64 1925 aaKnown RBP17.8■□□□□ 0.44
HMGB1P8-201ENST00000558211 ABCC3O15438 1527 aa17.79■□□□□ 0.44
HMGB1P8-201ENST00000558211 CNTLNQ9NXG0 1405 aa17.79■□□□□ 0.44
HMGB1P8-201ENST00000558211 ZMYM3Q14202 1370 aa17.79■□□□□ 0.44
HMGB1P8-201ENST00000558211 NKX1-1Q15270 411 aaPredicted RBP17.77■□□□□ 0.44
HMGB1P8-201ENST00000558211 EFCAB3Q8N7B9 438 aa17.77■□□□□ 0.44
HMGB1P8-201ENST00000558211 BBXQ8WY36 941 aaPredicted RBP17.77■□□□□ 0.44
HMGB1P8-201ENST00000558211 VWDEQ8N2E2 1590 aa17.77■□□□□ 0.44
HMGB1P8-201ENST00000558211 ZC3H13Q5T200 1668 aaKnown RBP17.77■□□□□ 0.43
HMGB1P8-201ENST00000558211 PTPRMP28827 1452 aa17.76■□□□□ 0.43
HMGB1P8-201ENST00000558211 FAM135AQ9P2D6 1515 aa17.76■□□□□ 0.43
HMGB1P8-201ENST00000558211 CAMSAP1Q5T5Y3 1602 aa17.76■□□□□ 0.43
HMGB1P8-201ENST00000558211 IQGAP3Q86VI3 1631 aa17.76■□□□□ 0.43
HMGB1P8-201ENST00000558211 C3P01024 1663 aa17.75■□□□□ 0.43
HMGB1P8-201ENST00000558211 MROH2AA6NES4 1674 aa17.74■□□□□ 0.43
HMGB1P8-201ENST00000558211 HRCP23327 699 aa17.74■□□□□ 0.43
HMGB1P8-201ENST00000558211 FBXO31Q5XUX0 539 aaPredicted RBP17.74■□□□□ 0.43
HMGB1P8-201ENST00000558211 MPHOSPH9Q99550 1183 aa17.73■□□□□ 0.43
HMGB1P8-201ENST00000558211 ACIN1Q9UKV3 1341 aaKnown RBP17.72■□□□□ 0.43
HMGB1P8-201ENST00000558211 LMTK2Q8IWU2 1503 aa17.72■□□□□ 0.43
HMGB1P8-201ENST00000558211 TET3O43151 1660 aa17.72■□□□□ 0.43
HMGB1P8-201ENST00000558211 PZPP20742 1482 aa17.72■□□□□ 0.43
HMGB1P8-201ENST00000558211 GOLGA2Q08379 1002 aa17.71■□□□□ 0.43
HMGB1P8-201ENST00000558211 IER5LQ5T953 404 aa17.71■□□□□ 0.43
HMGB1P8-201ENST00000558211 EFCAB6Q5THR3 1501 aa17.69■□□□□ 0.42
HMGB1P8-201ENST00000558211 E9PCH4 1651 aa17.69■□□□□ 0.42
HMGB1P8-201ENST00000558211 SOX12O15370 315 aa17.69■□□□□ 0.42
HMGB1P8-201ENST00000558211 MKRN3Q13064 507 aaKnown RBP17.69■□□□□ 0.42
HMGB1P8-201ENST00000558211 ILDR1Q86SU0 546 aaPredicted RBP17.69■□□□□ 0.42
HMGB1P8-201ENST00000558211 NPATQ14207 1427 aa17.69■□□□□ 0.42
HMGB1P8-201ENST00000558211 ARHGAP31Q2M1Z3 1444 aa17.67■□□□□ 0.42
HMGB1P8-201ENST00000558211 MFRPQ9BY79 579 aa17.67■□□□□ 0.42
HMGB1P8-201ENST00000558211 SLC39A7Q92504 469 aa17.66■□□□□ 0.42
HMGB1P8-201ENST00000558211 PREX1Q8TCU6 1659 aa17.65■□□□□ 0.42
HMGB1P8-201ENST00000558211 ERVK-7P63135 1459 aa17.64■□□□□ 0.41
HMGB1P8-201ENST00000558211 IRX5P78411 483 aaPredicted RBP17.64■□□□□ 0.41
HMGB1P8-201ENST00000558211 PLCB2Q00722 1185 aa17.64■□□□□ 0.41
HMGB1P8-201ENST00000558211 TNRQ92752 1358 aa17.64■□□□□ 0.41
HMGB1P8-201ENST00000558211 C7P10643 843 aa17.63■□□□□ 0.41
HMGB1P8-201ENST00000558211 FBXO22Q8NEZ5 403 aa17.63■□□□□ 0.41
HMGB1P8-201ENST00000558211 RPRD2Q5VT52 1461 aaKnown RBP17.63■□□□□ 0.41
HMGB1P8-201ENST00000558211 SETD1BQ9UPS6 1966 aaKnown RBP17.62■□□□□ 0.41
HMGB1P8-201ENST00000558211 PHF8Q9UPP1 1060 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms