RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 MSH6P52701 1360 aa8.2□□□□□ -1.1
SPG11-208ENST00000558155 JCADQ9P266 1359 aa8.2□□□□□ -1.1
SPG11-208ENST00000558155 ARHGAP31Q2M1Z3 1444 aa8.2□□□□□ -1.1
SPG11-208ENST00000558155 EIF2AK4Q9P2K8 1649 aaKnown RBP8.19□□□□□ -1.1
SPG11-208ENST00000558155 MEX3CQ5U5Q3 659 aaKnown RBP8.19□□□□□ -1.1
SPG11-208ENST00000558155 RBM33Q96EV2 1170 aaKnown RBP8.19□□□□□ -1.1
SPG11-208ENST00000558155 KANK1Q14678 1352 aa8.19□□□□□ -1.1
SPG11-208ENST00000558155 LRRC9Q6ZRR7 1453 aa8.19□□□□□ -1.1
SPG11-208ENST00000558155 MAST1Q9Y2H9 1570 aa8.18□□□□□ -1.1
SPG11-208ENST00000558155 UPF1Q92900 1129 aaKnown RBP eCLIP8.18□□□□□ -1.1
SPG11-208ENST00000558155 AKT1S1Q96B36 256 aa8.18□□□□□ -1.1
SPG11-208ENST00000558155 RRP7BPQ9NSQ0 103 aa8.18□□□□□ -1.1
SPG11-208ENST00000558155 DUOX2Q9NRD8 1548 aa8.18□□□□□ -1.1
SPG11-208ENST00000558155 ROBO1Q9Y6N7 1651 aa8.18□□□□□ -1.1
SPG11-208ENST00000558155 CEP152O94986 1710 aa8.17□□□□□ -1.1
SPG11-208ENST00000558155 SLC52A1Q9NWF4 448 aa8.17□□□□□ -1.1
SPG11-208ENST00000558155 SPATA31A6Q5VVP1 1343 aa8.17□□□□□ -1.1
SPG11-208ENST00000558155 MYOM3Q5VTT5 1437 aa8.17□□□□□ -1.1
SPG11-208ENST00000558155 RXRBP28702 533 aa8.16□□□□□ -1.1
SPG11-208ENST00000558155 PIP4P2Q8N4L2 257 aa8.16□□□□□ -1.1
SPG11-208ENST00000558155 TRIM52Q96A61 297 aa8.16□□□□□ -1.1
SPG11-208ENST00000558155 PIK3C2BO00750 1634 aa8.15□□□□□ -1.1
SPG11-208ENST00000558155 MROH1Q8NDA8 1641 aa8.15□□□□□ -1.1
SPG11-208ENST00000558155 PRDM15P57071 1507 aaPredicted RBP8.15□□□□□ -1.1
SPG11-208ENST00000558155 EFCAB6Q5THR3 1501 aa8.15□□□□□ -1.1
SPG11-208ENST00000558155 KIF15Q9NS87 1388 aa8.15□□□□□ -1.1
SPG11-208ENST00000558155 C14orf37Q86TY3 774 aa8.15□□□□□ -1.1
SPG11-208ENST00000558155 REM2Q8IYK8 340 aaPredicted RBP8.15□□□□□ -1.1
SPG11-208ENST00000558155 PHLPP1O60346 1717 aa8.15□□□□□ -1.11
SPG11-208ENST00000558155 TET3O43151 1660 aa8.14□□□□□ -1.11
SPG11-208ENST00000558155 ERBINQ96RT1 1412 aa8.14□□□□□ -1.11
SPG11-208ENST00000558155 PPP1R15AO75807 674 aaPredicted RBP8.14□□□□□ -1.11
SPG11-208ENST00000558155 ATF3P18847 181 aa8.14□□□□□ -1.11
SPG11-208ENST00000558155 KANK4Q5T7N3 995 aaPredicted RBP8.14□□□□□ -1.11
SPG11-208ENST00000558155 CADPS2Q86UW7 1296 aa8.14□□□□□ -1.11
SPG11-208ENST00000558155 C19orf44Q9H6X5 657 aa8.14□□□□□ -1.11
SPG11-208ENST00000558155 TBX22Q9Y458 520 aa8.14□□□□□ -1.11
SPG11-208ENST00000558155 KDM5AP29375 1690 aaKnown RBP8.14□□□□□ -1.11
SPG11-208ENST00000558155 NKTRP30414 1462 aaKnown RBP8.13□□□□□ -1.11
SPG11-208ENST00000558155 NCOA3Q9Y6Q9 1424 aa8.13□□□□□ -1.11
SPG11-208ENST00000558155 MAP3K1Q13233 1512 aa8.13□□□□□ -1.11
SPG11-208ENST00000558155 FGD6Q6ZV73 1430 aa8.12□□□□□ -1.11
SPG11-208ENST00000558155 SETD1AO15047 1707 aaKnown RBP8.12□□□□□ -1.11
SPG11-208ENST00000558155 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.12□□□□□ -1.11
SPG11-208ENST00000558155 ABCC5O15440 1437 aa8.12□□□□□ -1.11
SPG11-208ENST00000558155 NUTM2BA6NNL0 878 aaPredicted RBP8.11□□□□□ -1.11
SPG11-208ENST00000558155 NUTM2EB1AL46 878 aaPredicted RBP8.11□□□□□ -1.11
SPG11-208ENST00000558155 NUTM2AQ8IVF1 878 aaPredicted RBP8.11□□□□□ -1.11
SPG11-208ENST00000558155 CHIC2Q9UKJ5 165 aa8.11□□□□□ -1.11
SPG11-208ENST00000558155 ANKRD30AQ9BXX3 1397 aa8.1□□□□□ -1.11
SPG11-208ENST00000558155 PLEKHG1Q9ULL1 1385 aa8.1□□□□□ -1.11
SPG11-208ENST00000558155 CHD2O14647 1828 aaKnown RBP8.1□□□□□ -1.11
SPG11-208ENST00000558155 NOS1P29475 1434 aa8.1□□□□□ -1.11
SPG11-208ENST00000558155 NWD1Q149M9 1564 aa8.1□□□□□ -1.11
SPG11-208ENST00000558155 LMTK2Q8IWU2 1503 aa8.09□□□□□ -1.11
SPG11-208ENST00000558155 CHGAP10645 457 aaKnown RBP8.09□□□□□ -1.11
SPG11-208ENST00000558155 QTRT2Q9H974 415 aaKnown RBP8.09□□□□□ -1.11
SPG11-208ENST00000558155 VPS8Q8N3P4 1428 aa8.09□□□□□ -1.11
SPG11-208ENST00000558155 COL16A1Q07092 1604 aaPredicted RBP8.08□□□□□ -1.12
SPG11-208ENST00000558155 PITPNM1O00562 1244 aa8.08□□□□□ -1.12
SPG11-208ENST00000558155 RBM6P78332 1123 aaKnown RBP8.08□□□□□ -1.12
SPG11-208ENST00000558155 LRRC59Q96AG4 307 aaKnown RBP8.08□□□□□ -1.12
SPG11-208ENST00000558155 DAPK1P53355 1430 aa8.08□□□□□ -1.12
SPG11-208ENST00000558155 RIMS2Q9UQ26 1411 aa8.08□□□□□ -1.12
SPG11-208ENST00000558155 PIK3R4Q99570 1358 aa8.08□□□□□ -1.12
SPG11-208ENST00000558155 ADGRB3O60242 1522 aa8.08□□□□□ -1.12
SPG11-208ENST00000558155 LRP6O75581 1613 aa8.07□□□□□ -1.12
SPG11-208ENST00000558155 CDK12Q9NYV4 1490 aaPredicted RBP8.07□□□□□ -1.12
SPG11-208ENST00000558155 AFF2P51816 1311 aa8.07□□□□□ -1.12
SPG11-208ENST00000558155 NUTM2DQ5VT03 806 aaPredicted RBP8.07□□□□□ -1.12
SPG11-208ENST00000558155 BRINP3Q76B58 766 aa8.07□□□□□ -1.12
SPG11-208ENST00000558155 NGLY1Q96IV0 654 aa8.07□□□□□ -1.12
SPG11-208ENST00000558155 FOXD4L1Q9NU39 408 aa8.07□□□□□ -1.12
SPG11-208ENST00000558155 AMOTL2Q9Y2J4 779 aa8.07□□□□□ -1.12
SPG11-208ENST00000558155 ZBTB12Q9Y330 459 aaPredicted RBP8.07□□□□□ -1.12
SPG11-208ENST00000558155 ZFYVE9O95405 1425 aa8.06□□□□□ -1.12
SPG11-208ENST00000558155 FXR2P51116 673 aaKnown RBP eCLIP8.06□□□□□ -1.12
SPG11-208ENST00000558155 AHDC1Q5TGY3 1603 aaPredicted RBP8.06□□□□□ -1.12
SPG11-208ENST00000558155 PTPN23Q9H3S7 1636 aa8.06□□□□□ -1.12
SPG11-208ENST00000558155 RPRD2Q5VT52 1461 aaKnown RBP8.06□□□□□ -1.12
SPG11-208ENST00000558155 SHPRHQ149N8 1683 aa8.05□□□□□ -1.12
SPG11-208ENST00000558155 LOC105371045A0A1W2PR82 267 aa8.05□□□□□ -1.12
SPG11-208ENST00000558155 C8orf37Q96NL8 207 aa8.05□□□□□ -1.12
SPG11-208ENST00000558155 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.05□□□□□ -1.12
SPG11-208ENST00000558155 MYO5BQ9ULV0 1848 aa8.04□□□□□ -1.12
SPG11-208ENST00000558155 EVX2Q03828 476 aa8.04□□□□□ -1.12
SPG11-208ENST00000558155 SLC4A1APQ9BWU0 796 aaKnown RBP8.04□□□□□ -1.12
SPG11-208ENST00000558155 ZRANB1Q9UGI0 708 aa8.04□□□□□ -1.12
SPG11-208ENST00000558155 CROCC2H7BZ55 1655 aa8.04□□□□□ -1.12
SPG11-208ENST00000558155 ADAMTS13Q76LX8 1427 aa8.03□□□□□ -1.12
SPG11-208ENST00000558155 SETD5Q9C0A6 1442 aa8.03□□□□□ -1.12
SPG11-208ENST00000558155 ANKRD50Q9ULJ7 1429 aa8.03□□□□□ -1.12
SPG11-208ENST00000558155 HAX1O00165 279 aa8.02□□□□□ -1.13
SPG11-208ENST00000558155 FAM50AQ14320 339 aaKnown RBP8.02□□□□□ -1.13
SPG11-208ENST00000558155 TMEM131LA2VDJ0 1609 aa8.02□□□□□ -1.13
SPG11-208ENST00000558155 DIP2AQ14689 1571 aa8.01□□□□□ -1.13
SPG11-208ENST00000558155 ATAD2Q6PL18 1390 aa8.01□□□□□ -1.13
SPG11-208ENST00000558155 ZBTB22O15209 634 aa8.01□□□□□ -1.13
SPG11-208ENST00000558155 ADAMTS2O95450 1211 aa8.01□□□□□ -1.13
SPG11-208ENST00000558155 CCDC125Q86Z20 511 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms