RNA–Protein interactions for RNA: ENST00000558031.5

CRNDE-204, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 464 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-204ENST00000558031 MAP2K5Q13163 448 aa8.98□□□□□ -0.97
CRNDE-204ENST00000558031 NECTIN2Q92692 538 aa8.97□□□□□ -0.97
CRNDE-204ENST00000558031 APLP1P51693 650 aa8.95□□□□□ -0.98
CRNDE-204ENST00000558031 NLRP7Q8WX94 980 aa8.95□□□□□ -0.98
CRNDE-204ENST00000558031 PHOX2BQ99453 314 aa8.95□□□□□ -0.98
CRNDE-204ENST00000558031 IRF6O14896 467 aa8.94□□□□□ -0.98
CRNDE-204ENST00000558031 ITGBL1O95965 494 aaPredicted RBP8.94□□□□□ -0.98
CRNDE-204ENST00000558031 MINK1Q8N4C8 1332 aaPredicted RBP8.94□□□□□ -0.98
CRNDE-204ENST00000558031 ZC3H15Q8WU90 426 aaKnown RBP8.93□□□□□ -0.98
CRNDE-204ENST00000558031 IFFO2Q5TF58 517 aa8.92□□□□□ -0.98
CRNDE-204ENST00000558031 DAXXQ9UER7 740 aaPredicted RBP8.92□□□□□ -0.98
CRNDE-204ENST00000558031 SLC10A3P09131 477 aa8.91□□□□□ -0.98
CRNDE-204ENST00000558031 KCNC4Q03721 635 aa8.91□□□□□ -0.98
CRNDE-204ENST00000558031 CCDC102AQ96A19 550 aa8.91□□□□□ -0.98
CRNDE-204ENST00000558031 ZMYND10O75800 440 aa8.9□□□□□ -0.98
CRNDE-204ENST00000558031 TJAP1Q5JTD0 557 aa8.9□□□□□ -0.98
CRNDE-204ENST00000558031 MTRQ99707 1265 aa8.9□□□□□ -0.98
CRNDE-204ENST00000558031 PRR14Q9BWN1 585 aa8.9□□□□□ -0.98
CRNDE-204ENST00000558031 CFHP08603 1231 aa8.89□□□□□ -0.99
CRNDE-204ENST00000558031 BARGINQ6ZT62 677 aa8.89□□□□□ -0.99
CRNDE-204ENST00000558031 KRI1Q8N9T8 703 aaKnown RBP8.89□□□□□ -0.99
CRNDE-204ENST00000558031 BCANQ96GW7 911 aa8.89□□□□□ -0.99
CRNDE-204ENST00000558031 DDX11L8A8MPP1 907 aa8.88□□□□□ -0.99
CRNDE-204ENST00000558031 KMT5BQ4FZB7 885 aa8.88□□□□□ -0.99
CRNDE-204ENST00000558031 RSPH4AQ5TD94 716 aa8.88□□□□□ -0.99
CRNDE-204ENST00000558031 IL21Q9HBE4 155 aa8.88□□□□□ -0.99
CRNDE-204ENST00000558031 COPS2P61201 443 aa8.87□□□□□ -0.99
CRNDE-204ENST00000558031 RDH13Q8NBN7 331 aa8.87□□□□□ -0.99
CRNDE-204ENST00000558031 PCDHB3Q9Y5E6 796 aa8.87□□□□□ -0.99
CRNDE-204ENST00000558031 A0A0G2JS52 829 aa8.86□□□□□ -0.99
CRNDE-204ENST00000558031 ACTN4O43707 911 aaKnown RBP8.86□□□□□ -0.99
CRNDE-204ENST00000558031 SULF1Q8IWU6 871 aa8.86□□□□□ -0.99
CRNDE-204ENST00000558031 MDM2Q00987 491 aaPredicted RBP8.85□□□□□ -0.99
CRNDE-204ENST00000558031 ZNF516Q92618 1163 aa8.85□□□□□ -0.99
CRNDE-204ENST00000558031 BLOC1S3Q6QNY0 202 aa8.83□□□□□ -1
CRNDE-204ENST00000558031 CLCN1P35523 988 aa8.81□□□□□ -1
CRNDE-204ENST00000558031 ZPR1O75312 459 aa8.8□□□□□ -1
CRNDE-204ENST00000558031 GCGRP47871 477 aa8.8□□□□□ -1
CRNDE-204ENST00000558031 NKX2-3Q8TAU0 364 aa8.8□□□□□ -1
CRNDE-204ENST00000558031 GPCPD1Q9NPB8 672 aa8.8□□□□□ -1
CRNDE-204ENST00000558031 CD46P15529 392 aa8.79□□□□□ -1
CRNDE-204ENST00000558031 PUS10Q3MIT2 529 aaKnown RBP8.79□□□□□ -1
CRNDE-204ENST00000558031 FUT2Q10981 343 aa8.78□□□□□ -1
CRNDE-204ENST00000558031 TMUB1Q9BVT8 246 aa8.78□□□□□ -1
CRNDE-204ENST00000558031 AK7Q96M32 723 aa8.77□□□□□ -1.01
CRNDE-204ENST00000558031 REPIN1Q9BWE0 567 aaKnown RBP8.77□□□□□ -1.01
CRNDE-204ENST00000558031 FAM217BQ9NTX9 383 aaPredicted RBP8.77□□□□□ -1.01
CRNDE-204ENST00000558031 TLL1O43897 1013 aa8.76□□□□□ -1.01
CRNDE-204ENST00000558031 NR1I2O75469 434 aa8.76□□□□□ -1.01
CRNDE-204ENST00000558031 AMHR2Q16671 573 aa8.76□□□□□ -1.01
CRNDE-204ENST00000558031 TRIM66O15016 1216 aa8.75□□□□□ -1.01
CRNDE-204ENST00000558031 RGS20O76081 388 aa8.75□□□□□ -1.01
CRNDE-204ENST00000558031 ATP6V1AP38606 617 aa8.75□□□□□ -1.01
CRNDE-204ENST00000558031 TTLL12Q14166 644 aaPredicted RBP8.75□□□□□ -1.01
CRNDE-204ENST00000558031 PPP1R18Q6NYC8 613 aa8.75□□□□□ -1.01
CRNDE-204ENST00000558031 SCUBE3Q8IX30 993 aa8.75□□□□□ -1.01
CRNDE-204ENST00000558031 SLC24A3Q9HC58 644 aa8.75□□□□□ -1.01
CRNDE-204ENST00000558031 MORN1Q5T089 497 aa8.74□□□□□ -1.01
CRNDE-204ENST00000558031 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.73□□□□□ -1.01
CRNDE-204ENST00000558031 KDM4AO75164 1064 aa8.72□□□□□ -1.01
CRNDE-204ENST00000558031 SSTR3P32745 418 aaPredicted RBP8.72□□□□□ -1.01
CRNDE-204ENST00000558031 ADH1BP00325 375 aa8.71□□□□□ -1.02
CRNDE-204ENST00000558031 GGCXP38435 758 aa8.71□□□□□ -1.02
CRNDE-204ENST00000558031 GRIPAP1Q4V328 841 aa8.71□□□□□ -1.02
CRNDE-204ENST00000558031 GIGYF2Q6Y7W6 1299 aaKnown RBP8.71□□□□□ -1.02
CRNDE-204ENST00000558031 SLC27A5Q9Y2P5 690 aa8.71□□□□□ -1.02
CRNDE-204ENST00000558031 PARP9Q8IXQ6 854 aa8.7□□□□□ -1.02
CRNDE-204ENST00000558031 SPSB2Q99619 263 aa8.69□□□□□ -1.02
CRNDE-204ENST00000558031 S1PR4O95977 384 aa8.68□□□□□ -1.02
CRNDE-204ENST00000558031 USP46P62068 366 aa8.68□□□□□ -1.02
CRNDE-204ENST00000558031 PDE4DQ08499 809 aa8.68□□□□□ -1.02
CRNDE-204ENST00000558031 NUTM1Q86Y26 1132 aa8.68□□□□□ -1.02
CRNDE-204ENST00000558031 THAP11Q96EK4 314 aa8.68□□□□□ -1.02
CRNDE-204ENST00000558031 FMNL1O95466 1100 aaPredicted RBP8.67□□□□□ -1.02
CRNDE-204ENST00000558031 HLA-CQ95604 372 aa8.67□□□□□ -1.02
CRNDE-204ENST00000558031 SLC6A16Q9GZN6 736 aa8.67□□□□□ -1.02
CRNDE-204ENST00000558031 RNF223E7ERA6 249 aa8.66□□□□□ -1.02
CRNDE-204ENST00000558031 HOXA2O43364 376 aa8.66□□□□□ -1.02
CRNDE-204ENST00000558031 SALL2Q9Y467 1007 aaPredicted RBP8.66□□□□□ -1.02
CRNDE-204ENST00000558031 PPEF1O14829 653 aaPredicted RBP8.65□□□□□ -1.02
CRNDE-204ENST00000558031 BRICD5Q6PL45 260 aa8.65□□□□□ -1.02
CRNDE-204ENST00000558031 RNF19BQ6ZMZ0 732 aa8.65□□□□□ -1.02
CRNDE-204ENST00000558031 BEGAINQ9BUH8 593 aa8.65□□□□□ -1.02
CRNDE-204ENST00000558031 MS4A1P11836 297 aa8.64□□□□□ -1.03
CRNDE-204ENST00000558031 GUCA2AQ02747 115 aa8.64□□□□□ -1.03
CRNDE-204ENST00000558031 Q3C1V9 767 aa8.64□□□□□ -1.03
CRNDE-204ENST00000558031 SPIRE2Q8WWL2 714 aa8.64□□□□□ -1.03
CRNDE-204ENST00000558031 PRKD2Q9BZL6 878 aa8.64□□□□□ -1.03
CRNDE-204ENST00000558031 FAM160A2Q8N612 972 aaPredicted RBP8.63□□□□□ -1.03
CRNDE-204ENST00000558031 ANKLE1Q8NAG6 615 aa8.62□□□□□ -1.03
CRNDE-204ENST00000558031 PRDM9Q9NQV7 894 aa8.61□□□□□ -1.03
CRNDE-204ENST00000558031 V9GY48 417 aaPredicted RBP8.61□□□□□ -1.03
CRNDE-204ENST00000558031 FDX1P10109 184 aa8.6□□□□□ -1.03
CRNDE-204ENST00000558031 MSS51Q4VC12 460 aa8.6□□□□□ -1.03
CRNDE-204ENST00000558031 TBC1D2Q9BYX2 928 aa8.6□□□□□ -1.03
CRNDE-204ENST00000558031 MOXD2PA6NHM9 499 aa8.59□□□□□ -1.03
CRNDE-204ENST00000558031 NDUFV2P19404 249 aa8.59□□□□□ -1.03
CRNDE-204ENST00000558031 USB1Q9BQ65 265 aaKnown RBP8.59□□□□□ -1.03
CRNDE-204ENST00000558031 IRX2Q9BZI1 471 aaPredicted RBP8.59□□□□□ -1.03
CRNDE-204ENST00000558031 SYMPKQ92797 1274 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms