RNA–Protein interactions for RNA: ENST00000557948.1

TRPM1-204, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-204ENST00000557948 POTEDQ86YR6 584 aa9.66□□□□□ -0.86
TRPM1-204ENST00000557948 EID1Q9Y6B2 187 aa9.66□□□□□ -0.86
TRPM1-204ENST00000557948 NWD1Q149M9 1564 aa9.66□□□□□ -0.86
TRPM1-204ENST00000557948 ABCC3O15438 1527 aa9.66□□□□□ -0.86
TRPM1-204ENST00000557948 LRRIQ1Q96JM4 1722 aa9.65□□□□□ -0.86
TRPM1-204ENST00000557948 AHDC1Q5TGY3 1603 aaPredicted RBP9.65□□□□□ -0.86
TRPM1-204ENST00000557948 SLIT1O75093 1534 aa9.64□□□□□ -0.87
TRPM1-204ENST00000557948 NKTRP30414 1462 aaKnown RBP9.64□□□□□ -0.87
TRPM1-204ENST00000557948 PLEKHH2Q8IVE3 1493 aa9.64□□□□□ -0.87
TRPM1-204ENST00000557948 CFAP65Q6ZU64 1925 aaKnown RBP9.64□□□□□ -0.87
TRPM1-204ENST00000557948 KDM5AP29375 1690 aaKnown RBP9.64□□□□□ -0.87
TRPM1-204ENST00000557948 KIAA1107Q9UPP5 1409 aa9.64□□□□□ -0.87
TRPM1-204ENST00000557948 NHSL1Q5SYE7 1610 aa9.64□□□□□ -0.87
TRPM1-204ENST00000557948 DHX29Q7Z478 1369 aaKnown RBP9.63□□□□□ -0.87
TRPM1-204ENST00000557948 SENP3-EIF4A1A0A087X0R7 540 aa9.63□□□□□ -0.87
TRPM1-204ENST00000557948 NCOA2Q15596 1464 aa9.63□□□□□ -0.87
TRPM1-204ENST00000557948 ARHGAP23Q9P227 1491 aa9.63□□□□□ -0.87
TRPM1-204ENST00000557948 C1QBPQ07021 282 aaKnown RBP9.62□□□□□ -0.87
TRPM1-204ENST00000557948 DIP2AQ14689 1571 aa9.62□□□□□ -0.87
TRPM1-204ENST00000557948 ERVK-7P63135 1459 aa9.6□□□□□ -0.87
TRPM1-204ENST00000557948 ABCB7O75027 752 aa9.6□□□□□ -0.87
TRPM1-204ENST00000557948 HRCP23327 699 aa9.59□□□□□ -0.87
TRPM1-204ENST00000557948 C14orf37Q86TY3 774 aa9.59□□□□□ -0.87
TRPM1-204ENST00000557948 SLC26A8Q96RN1 970 aa9.59□□□□□ -0.87
TRPM1-204ENST00000557948 GPATCH8Q9UKJ3 1502 aaKnown RBP9.59□□□□□ -0.87
TRPM1-204ENST00000557948 RTEL1-TNFRSF6BF6WH68 1400 aa9.58□□□□□ -0.88
TRPM1-204ENST00000557948 BLMP54132 1417 aaPredicted RBP9.58□□□□□ -0.88
TRPM1-204ENST00000557948 PSDA5PKW4 1024 aaPredicted RBP9.58□□□□□ -0.88
TRPM1-204ENST00000557948 SLC24A1O60721 1099 aa9.58□□□□□ -0.88
TRPM1-204ENST00000557948 SF3B2Q13435 895 aaKnown RBP9.58□□□□□ -0.88
TRPM1-204ENST00000557948 CFDP1Q9UEE9 299 aaPredicted RBP9.58□□□□□ -0.88
TRPM1-204ENST00000557948 TRPC5Q9UL62 973 aaPredicted RBP9.58□□□□□ -0.88
TRPM1-204ENST00000557948 DEFB132Q7Z7B7 95 aa9.57□□□□□ -0.88
TRPM1-204ENST00000557948 USP21Q9UK80 565 aa9.57□□□□□ -0.88
TRPM1-204ENST00000557948 CCDC18Q5T9S5 1454 aa9.56□□□□□ -0.88
TRPM1-204ENST00000557948 TMEM2Q9UHN6 1383 aa9.56□□□□□ -0.88
TRPM1-204ENST00000557948 ADAMTS2O95450 1211 aa9.56□□□□□ -0.88
TRPM1-204ENST00000557948 ATF3P18847 181 aa9.56□□□□□ -0.88
TRPM1-204ENST00000557948 CADPS2Q86UW7 1296 aa9.56□□□□□ -0.88
TRPM1-204ENST00000557948 PROM2Q8N271 834 aa9.56□□□□□ -0.88
TRPM1-204ENST00000557948 TET3O43151 1660 aa9.55□□□□□ -0.88
TRPM1-204ENST00000557948 PELP1Q8IZL8 1130 aaKnown RBP9.55□□□□□ -0.88
TRPM1-204ENST00000557948 LRRC59Q96AG4 307 aaKnown RBP9.55□□□□□ -0.88
TRPM1-204ENST00000557948 BCANQ96GW7 911 aa9.55□□□□□ -0.88
TRPM1-204ENST00000557948 STAG3Q9UJ98 1225 aa9.55□□□□□ -0.88
TRPM1-204ENST00000557948 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.55□□□□□ -0.88
TRPM1-204ENST00000557948 SETD5Q9C0A6 1442 aa9.55□□□□□ -0.88
TRPM1-204ENST00000557948 CHD2O14647 1828 aaKnown RBP9.54□□□□□ -0.88
TRPM1-204ENST00000557948 FBXO3Q9UK99 471 aa9.54□□□□□ -0.88
TRPM1-204ENST00000557948 PIK3C2BO00750 1634 aa9.53□□□□□ -0.88
TRPM1-204ENST00000557948 BRINP3Q76B58 766 aa9.53□□□□□ -0.88
TRPM1-204ENST00000557948 NCOA3Q9Y6Q9 1424 aa9.53□□□□□ -0.88
TRPM1-204ENST00000557948 MAST1Q9Y2H9 1570 aa9.53□□□□□ -0.88
TRPM1-204ENST00000557948 BCL9LQ86UU0 1499 aa9.53□□□□□ -0.88
TRPM1-204ENST00000557948 CCNB3Q8WWL7 1395 aa9.52□□□□□ -0.88
TRPM1-204ENST00000557948 ATRNO75882 1429 aa9.52□□□□□ -0.89
TRPM1-204ENST00000557948 C19orf44Q9H6X5 657 aa9.52□□□□□ -0.89
TRPM1-204ENST00000557948 CAMSAP2Q08AD1 1489 aa9.52□□□□□ -0.89
TRPM1-204ENST00000557948 ARHGAP35Q9NRY4 1499 aa9.52□□□□□ -0.89
TRPM1-204ENST00000557948 PNPLA6Q8IY17 1366 aa9.51□□□□□ -0.89
TRPM1-204ENST00000557948 CEP152O94986 1710 aa9.51□□□□□ -0.89
TRPM1-204ENST00000557948 MROH1Q8NDA8 1641 aa9.51□□□□□ -0.89
TRPM1-204ENST00000557948 ASXL1Q8IXJ9 1541 aa9.51□□□□□ -0.89
TRPM1-204ENST00000557948 MBD5Q9P267 1494 aa9.5□□□□□ -0.89
TRPM1-204ENST00000557948 EFCAB6Q5THR3 1501 aa9.5□□□□□ -0.89
TRPM1-204ENST00000557948 UNC13BO14795 1591 aa9.5□□□□□ -0.89
TRPM1-204ENST00000557948 C1QTNF8P60827 252 aa9.49□□□□□ -0.89
TRPM1-204ENST00000557948 FNBP4Q8N3X1 1017 aaPredicted RBP9.49□□□□□ -0.89
TRPM1-204ENST00000557948 ZNF644Q9H582 1327 aaPredicted RBP9.49□□□□□ -0.89
TRPM1-204ENST00000557948 ZNF784Q8NCA9 323 aaPredicted RBP9.48□□□□□ -0.89
TRPM1-204ENST00000557948 BRWD3Q6RI45 1802 aa9.47□□□□□ -0.89
TRPM1-204ENST00000557948 VASPP50552 380 aaPredicted RBP9.47□□□□□ -0.89
TRPM1-204ENST00000557948 SPHKAPQ2M3C7 1700 aa9.46□□□□□ -0.89
TRPM1-204ENST00000557948 BAG6P46379 1132 aa9.46□□□□□ -0.9
TRPM1-204ENST00000557948 R3HDM1Q15032 1099 aaKnown RBP9.46□□□□□ -0.9
TRPM1-204ENST00000557948 GJD4Q96KN9 370 aaPredicted RBP9.46□□□□□ -0.9
TRPM1-204ENST00000557948 CASKIN1Q8WXD9 1431 aa9.46□□□□□ -0.9
TRPM1-204ENST00000557948 CCDC141Q6ZP82 1450 aa9.46□□□□□ -0.9
TRPM1-204ENST00000557948 DSG3P32926 999 aa9.45□□□□□ -0.9
TRPM1-204ENST00000557948 ZBTB12Q9Y330 459 aaPredicted RBP9.45□□□□□ -0.9
TRPM1-204ENST00000557948 PTCH1Q13635 1447 aa9.45□□□□□ -0.9
TRPM1-204ENST00000557948 EEA1Q15075 1411 aa9.45□□□□□ -0.9
TRPM1-204ENST00000557948 DDX17Q92841 729 aaKnown RBP9.44□□□□□ -0.9
TRPM1-204ENST00000557948 CEP350Q5VT06 3117 aa9.43□□□□□ -0.9
TRPM1-204ENST00000557948 EIF2AK4Q9P2K8 1649 aaKnown RBP9.43□□□□□ -0.9
TRPM1-204ENST00000557948 PPP1R15AO75807 674 aaPredicted RBP9.43□□□□□ -0.9
TRPM1-204ENST00000557948 UBTFP17480 764 aaKnown RBP9.43□□□□□ -0.9
TRPM1-204ENST00000557948 DCCP43146 1447 aa9.42□□□□□ -0.9
TRPM1-204ENST00000557948 ARHGAP31Q2M1Z3 1444 aa9.42□□□□□ -0.9
TRPM1-204ENST00000557948 IDI1Q13907 227 aa9.41□□□□□ -0.9
TRPM1-204ENST00000557948 RSPH4AQ5TD94 716 aa9.41□□□□□ -0.9
TRPM1-204ENST00000557948 IFNLR1Q8IU57 520 aaPredicted RBP9.41□□□□□ -0.9
TRPM1-204ENST00000557948 PPP1R1BQ9UD71 204 aaPredicted RBP9.41□□□□□ -0.9
TRPM1-204ENST00000557948 MARF1Q9Y4F3 1742 aaKnown RBP9.41□□□□□ -0.9
TRPM1-204ENST00000557948 MST1RQ04912 1400 aa9.4□□□□□ -0.9
TRPM1-204ENST00000557948 PLEKHG1Q9ULL1 1385 aa9.4□□□□□ -0.9
TRPM1-204ENST00000557948 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.4□□□□□ -0.9
TRPM1-204ENST00000557948 TSPY4P0CV99 314 aa9.4□□□□□ -0.9
TRPM1-204ENST00000557948 TSPY10P0CW01 314 aa9.4□□□□□ -0.9
TRPM1-204ENST00000557948 MYT1Q01538 1121 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms