RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 ZNF142P52746 1687 aaPredicted RBP14.87□□□□□ -0.03
GABRB3-213ENST00000557765 NEXMIFQ5QGS0 1516 aa14.87□□□□□ -0.03
GABRB3-213ENST00000557765 ZNF326Q5BKZ1 582 aaKnown RBP14.87□□□□□ -0.03
GABRB3-213ENST00000557765 FBXO31Q5XUX0 539 aaPredicted RBP14.87□□□□□ -0.03
GABRB3-213ENST00000557765 PTPRMP28827 1452 aa14.87□□□□□ -0.03
GABRB3-213ENST00000557765 RIMS1Q86UR5 1692 aaKnown RBP14.87□□□□□ -0.03
GABRB3-213ENST00000557765 SLIT1O75093 1534 aa14.87□□□□□ -0.03
GABRB3-213ENST00000557765 PIK3C2GO75747 1445 aa14.86□□□□□ -0.03
GABRB3-213ENST00000557765 RGL3Q3MIN7 710 aa14.86□□□□□ -0.03
GABRB3-213ENST00000557765 TRPM1Q7Z4N2 1603 aa14.85□□□□□ -0.03
GABRB3-213ENST00000557765 EIF4G2P78344 907 aaKnown RBP eCLIP14.85□□□□□ -0.03
GABRB3-213ENST00000557765 EIF3AQ14152 1382 aaKnown RBP14.85□□□□□ -0.03
GABRB3-213ENST00000557765 TMEM2Q9UHN6 1383 aa14.85□□□□□ -0.03
GABRB3-213ENST00000557765 MYO3AQ8NEV4 1616 aa14.84□□□□□ -0.03
GABRB3-213ENST00000557765 UBR1Q8IWV7 1749 aa14.84□□□□□ -0.03
GABRB3-213ENST00000557765 ARHGAP23Q9P227 1491 aa14.83□□□□□ -0.03
GABRB3-213ENST00000557765 CEP170BQ9Y4F5 1589 aaPredicted RBP14.83□□□□□ -0.04
GABRB3-213ENST00000557765 EID1Q9Y6B2 187 aa14.83□□□□□ -0.04
GABRB3-213ENST00000557765 ROCK2O75116 1388 aaKnown RBP14.83□□□□□ -0.04
GABRB3-213ENST00000557765 CFAP65Q6ZU64 1925 aaKnown RBP14.82□□□□□ -0.04
GABRB3-213ENST00000557765 ZNF316A6NFI3 1004 aaPredicted RBP14.81□□□□□ -0.04
GABRB3-213ENST00000557765 CHGAP10645 457 aaKnown RBP14.81□□□□□ -0.04
GABRB3-213ENST00000557765 C14orf93Q9H972 538 aaKnown RBP14.81□□□□□ -0.04
GABRB3-213ENST00000557765 RIMS2Q9UQ26 1411 aa14.81□□□□□ -0.04
GABRB3-213ENST00000557765 DIP2AQ14689 1571 aa14.8□□□□□ -0.04
GABRB3-213ENST00000557765 NBPF8Q3BBV2 869 aa14.79□□□□□ -0.04
GABRB3-213ENST00000557765 KDM2AQ9Y2K7 1162 aa14.79□□□□□ -0.04
GABRB3-213ENST00000557765 SCAF11Q99590 1463 aaKnown RBP14.78□□□□□ -0.04
GABRB3-213ENST00000557765 PLEKHG1Q9ULL1 1385 aa14.78□□□□□ -0.04
GABRB3-213ENST00000557765 SBNO2Q9Y2G9 1366 aa14.78□□□□□ -0.04
GABRB3-213ENST00000557765 CARD11Q9BXL7 1154 aa14.78□□□□□ -0.04
GABRB3-213ENST00000557765 PIK3R4Q99570 1358 aa14.77□□□□□ -0.04
GABRB3-213ENST00000557765 SIRT1Q96EB6 747 aa14.76□□□□□ -0.05
GABRB3-213ENST00000557765 USP47Q96K76 1375 aa14.75□□□□□ -0.05
GABRB3-213ENST00000557765 CDCA8Q53HL2 280 aa14.75□□□□□ -0.05
GABRB3-213ENST00000557765 ADGRF5Q8IZF2 1346 aa14.74□□□□□ -0.05
GABRB3-213ENST00000557765 CEBPAP49715 358 aaPredicted RBP14.74□□□□□ -0.05
GABRB3-213ENST00000557765 ANKLE2Q86XL3 938 aa14.73□□□□□ -0.05
GABRB3-213ENST00000557765 PUS7Q96PZ0 661 aaKnown RBP14.73□□□□□ -0.05
GABRB3-213ENST00000557765 MED14O60244 1454 aa14.73□□□□□ -0.05
GABRB3-213ENST00000557765 MYO5BQ9ULV0 1848 aa14.73□□□□□ -0.05
GABRB3-213ENST00000557765 ADGRB1O14514 1584 aa14.73□□□□□ -0.05
GABRB3-213ENST00000557765 IQGAP1P46940 1657 aa14.72□□□□□ -0.05
GABRB3-213ENST00000557765 TBX22Q9Y458 520 aa14.72□□□□□ -0.05
GABRB3-213ENST00000557765 DLC1Q96QB1 1528 aa14.71□□□□□ -0.05
GABRB3-213ENST00000557765 ALKQ9UM73 1620 aa14.7□□□□□ -0.06
GABRB3-213ENST00000557765 TXNDC2Q86VQ3 553 aa14.7□□□□□ -0.06
GABRB3-213ENST00000557765 ABCC11Q96J66 1382 aa14.7□□□□□ -0.06
GABRB3-213ENST00000557765 POLR1AO95602 1720 aaPredicted RBP14.69□□□□□ -0.06
GABRB3-213ENST00000557765 TECPR2O15040 1411 aa14.69□□□□□ -0.06
GABRB3-213ENST00000557765 FAM135BQ49AJ0 1406 aa14.68□□□□□ -0.06
GABRB3-213ENST00000557765 HSPA5P11021 654 aaKnown RBP14.67□□□□□ -0.06
GABRB3-213ENST00000557765 CFAP70Q5T0N1 1121 aa14.67□□□□□ -0.06
GABRB3-213ENST00000557765 LRPPRCP42704 1394 aaKnown RBP14.67□□□□□ -0.06
GABRB3-213ENST00000557765 TMF1P82094 1093 aa14.66□□□□□ -0.06
GABRB3-213ENST00000557765 KNDC1Q76NI1 1749 aa14.66□□□□□ -0.06
GABRB3-213ENST00000557765 YTHDC2Q9H6S0 1430 aaKnown RBP14.66□□□□□ -0.06
GABRB3-213ENST00000557765 KDM4FA0A1W2PPD8 638 aa14.65□□□□□ -0.06
GABRB3-213ENST00000557765 NBPF1Q3BBV0 1214 aa14.65□□□□□ -0.06
GABRB3-213ENST00000557765 NRXN3Q9Y4C0 1643 aa14.65□□□□□ -0.06
GABRB3-213ENST00000557765 SETD1AO15047 1707 aaKnown RBP14.64□□□□□ -0.07
GABRB3-213ENST00000557765 ADAMTS13Q76LX8 1427 aa14.64□□□□□ -0.07
GABRB3-213ENST00000557765 CENPJQ9HC77 1338 aaPredicted RBP14.64□□□□□ -0.07
GABRB3-213ENST00000557765 PTCH1Q13635 1447 aa14.63□□□□□ -0.07
GABRB3-213ENST00000557765 NINLQ9Y2I6 1382 aa14.62□□□□□ -0.07
GABRB3-213ENST00000557765 CPS1P31327 1500 aa14.62□□□□□ -0.07
GABRB3-213ENST00000557765 ST20-MTHFSA0A0A6YYL1 179 aa14.62□□□□□ -0.07
GABRB3-213ENST00000557765 LTKP29376 864 aa14.62□□□□□ -0.07
GABRB3-213ENST00000557765 DMRT2Q9Y5R5 561 aa14.61□□□□□ -0.07
GABRB3-213ENST00000557765 NPHP4O75161 1426 aaPredicted RBP14.6□□□□□ -0.07
GABRB3-213ENST00000557765 NCOA3Q9Y6Q9 1424 aa14.59□□□□□ -0.07
GABRB3-213ENST00000557765 TESK2Q96S53 571 aa14.59□□□□□ -0.07
GABRB3-213ENST00000557765 ASXL1Q8IXJ9 1541 aa14.59□□□□□ -0.07
GABRB3-213ENST00000557765 WASHC2AQ641Q2 1341 aa14.59□□□□□ -0.07
GABRB3-213ENST00000557765 CCDC7Q96M83 1385 aa14.59□□□□□ -0.07
GABRB3-213ENST00000557765 ARHGEF28Q8N1W1 1705 aaKnown RBP14.58□□□□□ -0.07
GABRB3-213ENST00000557765 LMTK3Q96Q04 1460 aa14.58□□□□□ -0.08
GABRB3-213ENST00000557765 BCANQ96GW7 911 aa14.58□□□□□ -0.08
GABRB3-213ENST00000557765 EVC2Q86UK5 1308 aa14.57□□□□□ -0.08
GABRB3-213ENST00000557765 NKTRP30414 1462 aaKnown RBP14.56□□□□□ -0.08
GABRB3-213ENST00000557765 METP08581 1390 aa14.55□□□□□ -0.08
GABRB3-213ENST00000557765 KTN1Q86UP2 1357 aaKnown RBP14.55□□□□□ -0.08
GABRB3-213ENST00000557765 POGKQ9P215 609 aa14.54□□□□□ -0.08
GABRB3-213ENST00000557765 ATAD2Q6PL18 1390 aa14.54□□□□□ -0.08
GABRB3-213ENST00000557765 ADGRB2O60241 1585 aa14.54□□□□□ -0.08
GABRB3-213ENST00000557765 NWD1Q149M9 1564 aa14.54□□□□□ -0.08
GABRB3-213ENST00000557765 QRICH2Q9H0J4 1663 aa14.54□□□□□ -0.08
GABRB3-213ENST00000557765 XRN1Q8IZH2 1706 aaKnown RBP14.54□□□□□ -0.08
GABRB3-213ENST00000557765 KIF7Q2M1P5 1343 aa14.53□□□□□ -0.08
GABRB3-213ENST00000557765 NUTM2DQ5VT03 806 aaPredicted RBP14.53□□□□□ -0.08
GABRB3-213ENST00000557765 TMEM132EQ6IEE7 984 aa14.53□□□□□ -0.08
GABRB3-213ENST00000557765 PLPPR3Q6T4P5 718 aa14.53□□□□□ -0.08
GABRB3-213ENST00000557765 TRAK1Q9UPV9 953 aa14.53□□□□□ -0.08
GABRB3-213ENST00000557765 KCNA6P17658 529 aa14.52□□□□□ -0.09
GABRB3-213ENST00000557765 DIEXFQ68CQ4 756 aaKnown RBP14.52□□□□□ -0.09
GABRB3-213ENST00000557765 CHD2O14647 1828 aaKnown RBP14.51□□□□□ -0.09
GABRB3-213ENST00000557765 PRAM1Q96QH2 718 aa14.49□□□□□ -0.09
GABRB3-213ENST00000557765 AMOTL2Q9Y2J4 779 aa14.49□□□□□ -0.09
GABRB3-213ENST00000557765 NPC1L1Q9UHC9 1359 aa14.47□□□□□ -0.09
GABRB3-213ENST00000557765 SLC26A8Q96RN1 970 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms